Simon Anders

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 33

Top Venues

Genome biology

Nature communications

Nature cancer

Nature

Universität Heidelberg

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Universität Heidelberg Jan 01 2017

Germany

Group leader :: Centre for Molecular Biology (ZMBH)

Institute for Molecular Medicine Finland (FIMM) Sep 01 2015 - Mar 06 2017

Finland

Group leader

European Molecular Biology Laboratory Aug 01 2009 - Jul 10 2015

Germany

Researcher :: Genome Biology Unit

European Bioinformatics Institute Nov 01 2007 - Jul 31 2009

United Kingdom

Post-doc

Leopold Franzens Universität für Innsbruck Jan 01 2004 - Oct 31 2007

Austria

PhD Student :: Physics Department

Ludwig-Maximilians-Universität Mar 01 2003 - Dec 31 2003

Germany

PhD Student :: Institut für Physik

Publications

Moritz Jakab, Ki Hong Lee, Alexey Uvarovskii, Svetlana Ovchinnikova, Shubhada R Kulkarni, Sevinç Jakab, Till Rostalski, Carleen Spegg, Simon Anders, Hellmut G Augustin
Lung endothelium exploits susceptible tumor cell states to instruct metastatic latency. Nature cancer (2024)
Svetlana Ovchinnikova, Simon Anders
Simple but powerful interactive data analysis in R with R/LinekdCharts. Genome biology 25 (1) (2024)
Andreas Deckert, Simon Anders, Ivonne Morales, Manuela De Allegri, Hoa Thi Nguyen, Aurélia Souares, Shannon A McMahon, Matthias Meurer, Robin Burk, Dan Lou, Lucia Brugnara, Matthias Sand, Lisa Koeppel, Lena Maier-Hein, Tobias Roß, Tim Julian Adler, Stephan Brenner, Christopher Dyer, Konrad Herbst, Svetlana Ovchinnikova, Michael Marx, Paul Schnitzler, Michael Knop, Till W Bärnighausen, Claudia M Denkinger
Correction: Comparison of Four Active SARS-CoV-2 Surveillance Strategies in Representative Population Sample Points: Two-Factor Factorial Randomized Controlled Trial. JMIR public health and surveillance 10 (2024)
Moritz Jakab, Ki Hong Lee, Alexey Uvarovskii, Svetlana Ovchinnikova, Shubhada R Kulkarni, Sevinç Jakab, Till Rostalski, Carleen Spegg, Simon Anders, Hellmut G Augustin
Lung endothelium exploits susceptible tumor cell states to instruct metastatic latency. Nature cancer 5 (5) (2024)
Moritz Jakab, Ki Hong Lee, Alexey Uvarovskii, Svetlana Ovchinnikova, Shubhada R Kulkarni, Sevinç Jakab, Till Rostalski, Carleen Spegg, Simon Anders, Hellmut G Augustin
Lung endothelium exploits susceptible tumor cell states to instruct metastatic latency. Nature cancer 5 (5) (2024)
Svetlana Ovchinnikova, Simon Anders
Simple but powerful interactive data analysis in R with R/LinekdCharts. Genome biology 25 (1) (2024)
Andreas Deckert, Simon Anders, Ivonne Morales, Manuela De Allegri, Hoa Thi Nguyen, Aurélia Souares, Shannon A McMahon, Matthias Meurer, Robin Burk, Dan Lou, Lucia Brugnara, Matthias Sand, Lisa Koeppel, Lena Maier-Hein, Tobias Roß, Tim Julian Adler, Stephan Brenner, Christopher Dyer, Konrad Herbst, Svetlana Ovchinnikova, Michael Marx, Paul Schnitzler, Michael Knop, Till W Bärnighausen, Claudia M Denkinger
Correction: Comparison of Four Active SARS-CoV-2 Surveillance Strategies in Representative Population Sample Points: Two-Factor Factorial Randomized Controlled Trial. JMIR public health and surveillance 10 (2024)
Svetlana Ovchinnikova, Simon Anders
Simple but powerful interactive data analysis in R with R/LinekdCharts. Genome biology 25 (1) (2024)
Svetlana Ovchinnikova, Simon Anders
Simple but powerful interactive data analysis in R with R/LinekdCharts. Genome biology 25 (1) (2024)
Lukas Peter Maria Kremer, Santiago Cerrizuela, Hadil El-Sammak, Mohammad Eid Al Shukairi, Tobias Ellinger, Jannes Straub, Aylin Korkmaz, Katrin Volk, Jan Brunken, Susanne Kleber, Simon Anders, Ana Martin-Villalba
DNA methylation controls stemness of astrocytes in health and ischaemia. Nature (2024)
Lukas Peter Maria Kremer, Martina M Braun, Svetlana Ovchinnikova, Leonie Küchenhoff, Santiago Cerrizuela, Ana Martin-Villalba, Simon Anders
Analyzing single-cell bisulfite sequencing data with MethSCAn. Nature methods (2024)
Moritz Jakab, Ki Hong Lee, Alexey Uvarovskii, Svetlana Ovchinnikova, Shubhada R Kulkarni, Sevinç Jakab, Till Rostalski, Carleen Spegg, Simon Anders, Hellmut G Augustin
Lung endothelium exploits susceptible tumor cell states to instruct metastatic latency. Nature cancer 5 (5) (2024)
Laura Theile, Xue Li, Hairuo Dang, Dorothee Mersch, Simon Anders, Elmar Schiebel
Centrosome linker diversity and its function in centrosome clustering and mitotic spindle formation. The EMBO journal (2023)
Mari Sepp, Kevin Leiss, Florent Murat, Konstantin Okonechnikov, Piyush Joshi, Evgeny Leushkin, Lisa Spänig, Noe Mbengue, Céline Schneider, Julia Schmidt, Nils Trost, Maria Schauer, Philipp Khaitovich, Steven N Lisgo, Miklos Palkovits, Peter Giere, Lena M Kutscher, Simon Anders, Margarida Cardoso-Moreira, Ioannis Sarropoulos, Stefan M Pfister, Henrick Kaessmann
Cellular development and evolution of the mammalian cerebellum. Nature (2023)
Damian Carvajal Ibañez, Maxim Skabkin, Jooa Hooli, Santiago Cerrizuela, Manuel Göpferich, Adrien Jolly, Katrin Volk, Marc Zumwinkel, Matilde Bertolini, Gianluca Figlia, Thomas Höfer, Guenter Kramer, Simon Anders, Aurelio A Teleman, Anna Marciniak-Czochra, Ana Martin-Villalba
Interferon regulates neural stem cell function at all ages by orchestrating mTOR and cell cycle. EMBO molecular medicine (2023)
Dan Lou, Matthias Meurer, Svetlana Ovchinnikova, Robin Burk, Anna Denzler, Konrad Herbst, Ioannis A Papaioannou, Yuanqiang Duan, Max L Jacobs, Victoria Witte, Daniel Ürge, Daniel Kirrmaier, Michelle Krogemann, Krisztina Gubicza, Kathleen Boerner, Christian Bundschuh, Niklas M Weidner, Uta Merle, Britta Knorr, Andreas Welker, Claudia M Denkinger, Paul Schnitzler, Hans-Georg Kräusslich, Viet Loan Dao Thi, Manuela De Allegri, Hoa Thi Nguyen, Andreas Deckert, Simon Anders, Michael Knop
Scalable RT-LAMP-based SARS-CoV-2 testing for infection surveillance with applications in pandemic preparedness. EMBO reports (2023)
Damian Carvajal Ibañez, Maxim Skabkin, Jooa Hooli, Santiago Cerrizuela, Manuel Göpferich, Adrien Jolly, Katrin Volk, Marc Zumwinkel, Matilde Bertolini, Gianluca Figlia, Thomas Höfer, Guenter Kramer, Simon Anders, Aurelio A Teleman, Anna Marciniak-Czochra, Ana Martin-Villalba
Interferon regulates neural stem cell function at all ages by orchestrating mTOR and cell cycle. EMBO molecular medicine (2023)
Leticia Rodríguez-Montes, Svetlana Ovchinnikova, Xuefei Yuan, Tania Studer, Ioannis Sarropoulos, Simon Anders, Henrick Kaessmann, Margarida Cardoso-Moreira
Sex-biased gene expression across mammalian organ development and evolution. Science (New York, N.Y.) 382 (6670) (2023)
Givanna H Putri, Simon Anders, Paul-Theodor Pyl, John E Pimanda, Fabio Zanini
Analysing high-throughput sequencing data in Python with HTSeq 2.0. Bioinformatics (Oxford, England) 38 (10) (2022)
Elena Porcellato, Juan Carlos González-Sánchez, Constantin Ahlmann-Eltze, Mahmoud Ali Elsakka, Itamar Shapira, Jürgen Fritsch, Juan Antonio Navarro, Simon Anders, Robert B Russell, Felix T Wieland, Christoph Metzendorf
The S-palmitoylome and DHHC-PAT interactome of Drosophila melanogaster S2R+ cells indicate a high degree of conservation to mammalian palmitoylomes. PloS one 17 (8) (2022)
Sophie A Herbst, Mattias Vesterlund, Alexander J Helmboldt, Rozbeh Jafari, Ioannis Siavelis, Matthias Stahl, Eva C Schitter, Nora Liebers, Berit J Brinkmann, Felix Czernilofsky, Tobias Roider, Peter-Martin Bruch, Murat Iskar, Adam Kittai, Ying Huang, JunYan Lu, Sarah Richter, Georgios Mermelekas, Husen Muhammad Umer, Mareike Knoll, Carolin Kolb, Angela Lenze, Xiaofang Cao, Cecilia Österholm, Linus Wahnschaffe, Carmen Herling, Sebastian Scheinost, Matthias Ganzinger, Larry Mansouri, Katharina Kriegsmann, Mark Kriegsmann, Simon Anders, Marc Zapatka, Giovanni Del Poeta, Antonella Zucchetto, Riccardo Bomben, Valter Gattei, Peter Dreger, Jennifer A Woyach, Marco Herling, Carsten Muller-Tidow, Richard Rosenquist, Stephan Stilgenbauer, Thorsten Zenz, Wolfgang Huber, Eugen Tausch, Janne Lehtiö, Sascha Dietrich
Proteogenomics refines the molecular classification of chronic lymphocytic leukemia. Nature communications 13 (1) (2022)
Nils Kurzawa, Isabelle Becher, Sindhuja Sridharan, Holger Franken, André Mateus, Simon Anders, Marcus Bantscheff, Wolfgang Huber, Mikhail M Savitski
Author Correction: A computational method for detection of ligand-binding proteins from dose range thermal proteome profiles. Nature communications 12 (1) (2021)
Nils Kurzawa, Isabelle Becher, Sindhuja Sridharan, Holger Franken, André Mateus, Simon Anders, Marcus Bantscheff, Wolfgang Huber, Mikhail M Savitski
A computational method for detection of ligand-binding proteins from dose range thermal proteome profiles. Nature communications 11 (1) (2020)
Steffen Klein, Thorsten G Müller, Dina Khalid, Vera Sonntag-Buck, Anke-Mareil Heuser, Bärbel Glass, Matthias Meurer, Ivonne Morales, Angelika Schillak, Andrew Freistaedter, Ina Ambiel, Sophie L Winter, Liv Zimmermann, Tamara Naumoska, Felix Bubeck, Daniel Kirrmaier, Stephanie Ullrich, Isabel Barreto Miranda, Simon Anders, Dirk Grimm, Paul Schnitzler, Michael Knop, Hans-Georg Kräusslich, Viet Loan Dao Thi, Kathleen Boerner, Petr Chlanda
SARS-CoV-2 RNA Extraction Using Magnetic Beads for Rapid Large-Scale Testing by RT-qPCR and RT-LAMP. Viruses 12 (8) (2020)
Tobias Roider, Julian Seufert, Alexey Uvarovskii, Felix Frauhammer, Marie Bordas, Nima Abedpour, Marta Stolarczyk, Jan Philipp Mallm, Sophie A Herbst, Peter-Martin Bruch, Hyatt Balke-Want, Michael Hundemer, Karsten Rippe, Benjamin Goeppert, Martina Seiffert, Benedikt Brors, Gunhild Mechtersheimer, Thorsten Zenz, Martin Peifer, Björn Chapuy, Matthias Schlesner, Carsten Muller-Tidow, Stefan Fröhling, Wolfgang Huber, Simon Anders, Sascha Dietrich
Dissecting intratumour heterogeneity of nodal B-cell lymphomas at the transcriptional, genetic and drug-response levels. Nature cell biology 22 (7) (2020)
Svetlana Ovchinnikova, Simon Anders
Exploring dimension-reduced embeddings with Sleepwalk. Genome research 30 (5) (2020)
Eran Segal, Feng Zhang, Xihong Lin, Gary King, Ophir Shalem, Smadar Shilo, William E Allen, Faisal Alquaddoomi, Han Altae-Tran, Simon Anders, Ran Balicer, Tal Bauman, Ximena Bonilla, Gisel Booman, Andrew T Chan, Ori Cohen, Silvano Coletti, Natalie Davidson, Yuval Dor, David A Drew, Olivier Elemento, Georgina Evans, Philip A Ewels, Joshua Gale, Amir Gavrieli, Benjamin Geiger, Yonatan Hagai Grad, Casey S Greene, Iman Hajirasouliha, Roman Jerala, Andre Kahles, Olli Kallioniemi, Ayya Keshet, Ljupco Kocarev, Gregory Landua, Tomer Meir, Aline Muller, Long H Nguyen, Matej Oresic, Svetlana Ovchinnikova, Hedi Peterson, Jana Prodanova, Jay Rajagopal, Gunnar Rätsch, Hagai Rossman, Johan Rung, Andrea Sboner, Alexandros Sigaras, Timothy D Spector, Ron Steinherz, Irene Stevens, Jaak Vilo, Paul Wilmes
Building an international consortium for tracking coronavirus health status. Nature medicine 26 (8) (2020)
Viet Loan Dao Thi, Konrad Herbst, Kathleen Boerner, Matthias Meurer, Lukas Peter Maria Kremer, Daniel Kirrmaier, Andrew Freistaedter, Dimitrios Papagiannidis, Carla V Galmozzi, Megan Lynn Stanifer, Steeve Boulant, Steffen Klein, Petr Chlanda, Dina Khalid, Isabel Barreto Miranda, Paul Schnitzler, Hans-Georg Kräusslich, Michael Knop, Simon Anders
A colorimetric RT-LAMP assay and LAMP-sequencing for detecting SARS-CoV-2 RNA in clinical samples. Science translational medicine 12 (556) (2020)
Zhong-Yi Wang, Evgeny Leushkin, Angelica Liechti, Svetlana Ovchinnikova, Katharina Mößinger, Thoomke Brüning, Coralie Rummel, Frank Grützner, Margarida Cardoso-Moreira, Peggy Janich, David Gatfield, Boubou Diagouraga, Bernard de Massy, Mark E Gill, Antoine H F M Peters, Simon Anders, Henrick Kaessmann
Transcriptome and translatome co-evolution in mammals. Nature 588 (7839) (2020)
Laurence Tessier, Olivier Côté, Mary Ellen Clark, Laurent Viel, Andrés Diaz-Méndez, Simon Anders, Dorothee Bienzle
Gene set enrichment analysis of the bronchial epithelium implicates contribution of cell cycle and tissue repair processes in equine asthma. Scientific reports 8 (1) (2018)
Katja Närhi, Ashwini S Nagaraj, Elina Parri, Riku Turkki, Petra W van Duijn, Annabrita Hemmes, Jenni Lahtela, Virva Uotinen, Mikko I Mäyränpää, Kaisa Salmenkivi, Jari Räsänen, Nina Linder, Jan Trapman, Antti Rannikko, Olli Kallioniemi, Taija M Af Hällström, Johan Lundin, Wolfgang Sommergruber, Simon Anders, Emmy W Verschuren
Spatial aspects of oncogenic signalling determine the response to combination therapy in slice explants from Kras-driven lung tumours. The Journal of pathology 245 (1) (2018)
Christian Hauer, Tomaz Curk, Simon Anders, Thomas Schwarzl, Anne-Marie Alleaume, Jana Sieber, Ina Hollerer, Madhuri Bhuvanagiri, Wolfgang Huber, Matthias W Hentze, Andreas E Kulozik
Improved binding site assignment by high-resolution mapping of RNA-protein interactions using iCLIP. Nature communications 6 (2015)
Wolfgang Huber, Vincent J Carey, Robert Gentleman, Simon Anders, Marc Carlson, Benilton S Carvalho, Hector Corrada Bravo, Sean Davis, Laurent Gatto, Thomas Girke, Raphael Gottardo, Florian Hahne, Kasper D Hansen, Rafael A Irizarry, Michael Lawrence, Michael I Love, James MacDonald, Valerie Obenchain, Andrzej K Oleś, Hervé Pagès, Alejandro Reyes, Paul Shannon, Gordon K Smyth, Dan Tenenbaum, Levi Waldron, Martin Morgan
Orchestrating high-throughput genomic analysis with Bioconductor. Nature methods 12 (2) (2015)

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Publication Activity (10 Years)

Top Topics

Top Venues

Simon Anders