Mehrtash Babadi

Publication Activity (10 Years)

Years Active: 2022-2024
Publications (10 Years): 9

Top Topics

Artificial Intelligence

High Throughput

Top Venues

bioRxiv : the preprint server for biology

Nature genetics

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Brice Wang, Tianle Ma, Theresa Chen, Trinh Nguyen, Ethan Crouse, Stephen J Fleming, Alison S Walker, Vera Valakh, Ralda Nehme, Evan W Miller, Samouil L Farhi, Mehrtash Babadi
Robust self-supervised denoising of voltage imaging data using CellMincer. bioRxiv : the preprint server for biology (2024)
Robert H W van Dijk, John Arevalo, Mehrtash Babadi, Anne E Carpenter, Shantanu Singh
Capturing cell heterogeneity in representations of cell populations for image-based profiling using contrastive learning. bioRxiv : the preprint server for biology (2024)
Brice Wang, Tianle Ma, Theresa Chen, Trinh Nguyen, Ethan Crouse, Stephen J Fleming, Alison S Walker, Vera Valakh, Ralda Nehme, Evan W Miller, Samouil L Farhi, Mehrtash Babadi
Robust self-supervised denoising of voltage imaging data using CellMincer. bioRxiv : the preprint server for biology (2024)
Mehrtash Babadi, Jack M Fu, Samuel K Lee, Andrey N Smirnov, Laura D Gauthier, Mark A Walker, David I Benjamin, Xuefang Zhao, Konrad J Karczewski, Isaac Wong, Ryan L Collins, Alba Sanchis-Juan, Harrison Brand, Eric Banks, Michael E Talkowski
Author Correction: GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data. Nature genetics (2024)
Robert H W van Dijk, John Arevalo, Mehrtash Babadi, Anne E Carpenter, Shantanu Singh
Capturing cell heterogeneity in representations of cell populations for image-based profiling using contrastive learning. bioRxiv : the preprint server for biology (2024)
Stephen J Fleming, Mark D Chaffin, Alessandro Arduini, Amer-Denis Akkad, Eric Banks, John C Marioni, Anthony A Philippakis, Patrick T Ellinor, Mehrtash Babadi
Unsupervised removal of systematic background noise from droplet-based single-cell experiments using CellBender. Nature methods (2023)
Alessandro Arduini, Stephen J Fleming, Ling Xiao, Amelia Weber Hall, Amer-Denis Akkad, Mark D Chaffin, Kayla J Bendinelli, Nathan R Tucker, Irinna Papangeli, Helene Mantineo, Mehrtash Babadi, Christian M Stegmann, Guillermo García-Cardeña, Mark E Lindsay, Carla Klattenhoff, Patrick T Ellinor
Transcriptional profile of the rat cardiovascular system at single cell resolution. bioRxiv : the preprint server for biology (2023)
Mehrtash Babadi, Jack M Fu, Samuel K Lee, Andrey N Smirnov, Laura D Gauthier, Mark A Walker, David I Benjamin, Xuefang Zhao, Konrad J Karczewski, Isaac Wong, Ryan L Collins, Alba Sanchis-Juan, Harrison Brand, Eric Banks, Michael E Talkowski
GATK-gCNV enables the discovery of rare copy number variants from exome sequencing data. Nature genetics (2023)
Fritz Obermeyer, Martin Jankowiak, Nikolaos Barkas, Stephen F Schaffner, Jesse D Pyle, Leonid A Yurkovetskiy, Matteo Bosso, Daniel J Park, Mehrtash Babadi, Bronwyn L MacInnis, Jeremy Luban, Pardis C Sabeti, Jacob E Lemieux
Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness. Science (New York, N.Y.) 376 (6599) (2022)