Nikolaos Barkas (Nikolas Barkas)

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 13

Top Topics

Chronic Lymphocytic Leukemia

Respiratory Syndrome Coronavirus

Transcranial Magnetic Stimulation

Top Venues

Nature communications

Science (New York, N.Y.)

The Journal of experimental medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Erica Normandin, Melissa A Rudy, Nikolaos Barkas, Stephen F Schaffner, Zoë C Levine, Robert F Padera, Mehrtash Babadi, Shibani S Mukerji, Daniel J Park, Bronwyn L MacInnis, Katherine J Siddle, Pardis C Sabeti, Isaac H Solomon
High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature communications 14 (1) (2023)
Fritz Obermeyer, Martin Jankowiak, Nikolaos Barkas, Stephen F Schaffner, Jesse D Pyle, Leonid A Yurkovetskiy, Matteo Bosso, Daniel J Park, Mehrtash Babadi, Bronwyn L MacInnis, Jeremy Luban, Pardis C Sabeti, Jacob E Lemieux
Analysis of 6.4 million SARS-CoV-2 genomes identifies mutations associated with fitness. Science (New York, N.Y.) 376 (6599) (2022)
Pavan Bachireddy, Christina Ennis, Vinhkhang N Nguyen, Satyen H Gohil, M Kendell Clement, Sachet A Shukla, Juliet Forman, Nikolaos Barkas, Samuel S Freeman, Natalie Bavli, Liudmila Elagina, Ignaty Leshchiner, Arman W Mohammad, Nathan D Mathewson, Derin B Keskin, Laura Z Rassenti, Thomas J Kipps, Jennifer R Brown, Gad A Getz, Vincent T Ho, Andreas Gnirke, Donna S Neuberg, Robert J Soiffer, Jerome Ritz, Edwin P Alyea, Peter V Kharchenko, Catherine J Wu
Distinct evolutionary paths in chronic lymphocytic leukemia during resistance to the graft-versus-leukemia effect. Science translational medicine 12 (561) (2021)
Jussi Kupari, Dmitry Usoskin, Marc Parisien, Daohua Lou, Yizhou Hu, Michael Fatt, Peter Lönnerberg, Mats Spångberg, Bengt Eriksson, Nikolaos Barkas, Peter V Kharchenko, Karin Loré, Samar Khoury, Luda Diatchenko, Patrik Ernfors
Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain. Nature communications 12 (1) (2021)
Toni Marie Delorey, Carly G K Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe, Domenic Abbondanza, Stephen J Fleming, Ayshwarya Subramanian, Daniel T Montoro, Karthik A Jagadeesh, Kushal K Dey, Pritha Sen, Michal Slyper, Yered H Pita-Juárez, Devan Phillips, Jana Biermann, Zohar Bloom-Ackermann, Nikolaos Barkas, Andrea Ganna, James Gomez, Johannes C Melms, Igor Katsyv, Erica Normandin, Pourya Naderi, Yury V Popov, Siddharth S Raju, Sebastian Niezen, Linus T-Y Tsai, Katherine J Siddle, Malika Sud, Victoria M Tran, Shamsudheen K Vellarikkal, Yiping Wang, Liat Amir-Zilberstein, Deepak S Atri, Joseph Beechem, Olga R Brook, Jonathan Chen, Prajan Divakar, Phylicia Dorceus, Jesse M Engreitz, Adam Essene, Donna M Fitzgerald, Robin Fropf, Steven Gazal, Joshua Gould, John Grzyb, Tyler Harvey, Jonathan Hecht, Tyler Hether, Judit Jané-Valbuena, Michael Leney-Greene, Hui Ma, Cristin McCabe, Daniel E McLoughlin, Eric M Miller, Christoph Muus, Mari Niemi, Robert Padera, Liuliu Pan, Deepti Pant, Carmel Pe'er, Jenna Pfiffner-Borges, Christopher J Pinto, Jacob Plaisted, Jason Reeves, Marty Ross, Melissa Rudy, Erroll H Rueckert, Michelle Siciliano, Alexander Sturm, Ellen Todres, Avinash Waghray, Sarah Warren, Shuting Zhang, Daniel R Zollinger, Lisa Cosimi, Rajat M Gupta, Nir Hacohen, Hanina Hibshoosh, Winston Hide, Alkes L Price, Jayaraj Rajagopal, Purushothama Rao Tata, Stefan Riedel, Gyongyi Szabo, Timothy L Tickle, Patrick T Ellinor, Deborah Hung, Pardis C Sabeti, Richard Novak, Robert Rogers, Donald E Ingber, Z Gordon Jiang, Dejan Juric, Mehrtash Babadi, Samouil L Farhi, Benjamin Izar, James R Stone, Ioannis S Vlachos, Isaac H Solomon, Orr Ashenberg, Caroline B M Porter, Bo Li, Alex K Shalek, Alexandra-Chloé Villani, Orit Rozenblatt-Rosen, Aviv Regev
COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Nature 595 (7865) (2021)
LeShana Saint Jean, Nikolaos Barkas, Cristina Harmelink, Kevin L Tompkins, Rebecca J Oakey, H Scott Baldwin
Myocardial differentiation is dependent upon endocardial signaling during early cardiogenesis in vitro. Development (Cambridge, England) 146 (9) (2019)
Nikolaos Barkas, Viktor Petukhov, Daria Nikolaeva, Yaroslav Lozinsky, Samuel Demharter, Konstantin Khodosevich, Peter V Kharchenko
Joint analysis of heterogeneous single-cell RNA-seq dataset collections. Nature methods 16 (8) (2019)
Adam J Mead, Wen Hao Neo, Nikolaos Barkas, Sahoko Matsuoka, Alice Giustacchini, Raffaella Facchini, Supat Thongjuea, Lauren Jamieson, Christopher A G Booth, Nicholas J Fordham, Cristina Di Genua, Deborah Atkinson, Onima Chowdhury, Emmanouela Repapi, Nicki Gray, Shabnam Kharazi, Sally-Ann Clark, Tiphaine Bouriez, Petter S Woll, Toshio Suda, Claus Nerlov, Sten Eirik W Jacobsen
Niche-mediated depletion of the normal hematopoietic stem cell reservoir by Flt3-ITD-induced myeloproliferation. The Journal of experimental medicine 214 (7) (2017)