Mile Šikić (Mile Sikic)

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 10

Top Venues

Nature communications

Nature methods

Genome research

Nature biotechnology

Genome Institute of Singapore

University of Zagreb, Faculty of Electrical Engineering and Computing (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Genome Institute of Singapore Oct 01 2018

Singapore

Group leader

University of Zagreb, Faculty of Electrical Engineering and Computing Dec 20 2015

Croatia

Associate Professor :: Department of Electronic Systems and Information Processing

Bioinformatics Institute - A STAR

Singapore

Adjunct Scientist

Education History

University of Zagreb, Faculty of Electrical Engineering and Computing

Croatia

PHD :: Department of Electronic Systems ans Information Processing

Publications

Dominik Stanojević, Zhe Li, Sara Bakić, Roger Sik Yin Foo, Mile Šikić
Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing. Nature communications 15 (1) (2024)
Dominik Stanojević, Zhe Li, Sara Bakić, Roger Sik Yin Foo, Mile Šikić
Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing. Nature communications 15 (1) (2024)
Dominik Stanojević, Zhe Li, Sara Bakić, Roger Sik Yin Foo, Mile Šikić
Rockfish: A transformer-based model for accurate 5-methylcytosine prediction from nanopore sequencing. Nature communications 15 (1) (2024)
Mile Šikić
Facilitating genome structural variation analysis. Nature methods (2023)
Tram Anh Nguyen, Jia Wei Joel Heng, Pornchai Kaewsapsak, Eng Piew Louis Kok, Dominik Stanojević, Hao Liu, Angelysia Cardilla, Albert Praditya, Zirong Yi, Mingwan Lin, Jong Ghut Ashley Aw, Yin Ying Ho, Esther Kai Lay Peh, Yuanming Wang, Qixing Zhong, Jacki E Heraud-Farlow, Shifeng Xue, Bruno Reversade, Carl R Walkley, Ying Swan Ho, Mile Šikić, Yue Wan, Meng How Tan
Direct identification of A-to-I editing sites with nanopore native RNA sequencing. Nature methods 19 (7) (2022)
Robert Vaser, Mile Šikić
Time- and memory-efficient genome assembly with Raven. Nature computational science 1 (5) (2021)
Denis Bertrand, Jim Shaw, Manesh Kalathiyappan, Amanda Hui Qi Ng, M Senthil Kumar, Chenhao Li, Mirta Dvornicic, Janja Paliska Soldo, Jia Yu Koh, Chengxuan Tong, Oon Tek Ng, Timothy Mark Sebastian Barkham, Barnaby Young, Kalisvar Marimuthu, Kern Rei Chng, Mile Šikić, Niranjan Nagarajan
Hybrid metagenomic assembly enables high-resolution analysis of resistance determinants and mobile elements in human microbiomes. Nature biotechnology 37 (8) (2019)
Robert Vaser, Ivan Sović, Niranjan Nagarajan, Mile Šikić
Fast and accurate de novo genome assembly from long uncorrected reads. Genome research 27 (5) (2017)
Ivan Sović, Mile Šikić, Andreas Wilm, Shannon Nicole Fenlon, Swaine L Chen, Niranjan Nagarajan
Fast and sensitive mapping of nanopore sequencing reads with GraphMap. Nature communications 7 (2016)
Robert Vaser, Swarnaseetha Adusumalli, Sim Ngak Leng, Mile Šikić, Pauline C Ng
SIFT missense predictions for genomes. Nature protocols 11 (1) (2015)

Mile Šikić.css-eqlu8i{font-size:small;padding-left:4px;} (Mile Sikic)

Publication Activity (10 Years)

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Mile Šikić (Mile Sikic)