Niranjan Nagarajan

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 19

Top Venues

Microbiology spectrum

Nature microbiology

Nature biotechnology

Nature communications

Ohio Wesleyan University (BSC)

This page only lists publications with an associated author ORCID identifier.

Education History

Ohio Wesleyan University

United States

BSC :: Mathematics and Computer Science

Publications

Martin Hunt, Angie S Hinrichs, Daniel Paolo Anderson, Lily Karim, Bethany L Dearlove, Jeff Knaggs, Bede Constantinides, Philip W Fowler, Gillian Rodger, Teresa Street, Sheila F Lumley, Hermione Webster, Theo Sanderson, Christopher Ruis, Nicola de Maio, Lucas N Amenga-Etego, Dominic Selorm Yao Amuzu, Martin Avaro, Gordon Akanzuwine Awandare, Reuben Ayivor-Djanie, Matthew Bashton, Elizabeth M Batty, Yaw Bediako, Denise De Belder, Estefania Benedetti, Andreas Bergthaler, Stefan A Boers, Josefina Campos, Rosina Afua Ampomah Carr, Facundo Cuba, Maria Elena Dattero, Wanwisa Dejnirattisai, Alexander T Dilthey, Kwabena Obeng Duedu, Lukas Endler, Ilka Engelmann, Ngiambudulu M Francisco, Jonas Fuchs, Etienne Gnimpieba Z, Soraya Groc, Jones Gyamfi, Dennis Heemskerk, Torsten Houwaart, Nei-Yuan Hsiao, Matthew Huska, Martin Hölzer, Arash Iranzadeh, Hanna Jarva, Chandima Jeewandara, Bani Jolly, Rageema Joseph, Ravi Kant, Karrie Ko Kwan Ki, Satu Kurkela, Maija Lappalainen, Marie Lataretu, Chang Liu, Gathsaurie Neelika Malavige, Tapfumanei Mashe, Juthathip Mongkolsapaya, Brigitte Montes, José Arturo Molina-Mora, Collins Misita Morang'a, Bernard Mvula, Niranjan Nagarajan, Andrew Nelson, Joyce M Ngoi, Joana Paula da Paixão, Marcus Panning, Tomás Javier Poklepovich, Peter Kojo Quashie, Diyanath Ranasinghe, Mara Russo, James Emmanuel San, Nicholas D Sanderson, Vinod Scaria, Gavin Screaton, Tarja A Sironen, Abay Sisay, Darren L Smith, Teemu Smura, Piyada Supasa, Chayaporn Suphavilai, Jeremy Swann, Houriiyah Tegally, Bryan Tegomoh, Olli Vapalahti, Andreas Walker, Robert John Wilkinson, Carolyn Williamson, null null, Tulio de Oliveira, Timothy Ea Peto, Derrick Crook, Russell Corbett-Detig, Zamin Iqbal
Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny. bioRxiv : the preprint server for biology (2024)
Yichen Ding, Shuan Er, Abel Tan, Jean-Sebastien Gounot, Woei-Yuh Saw, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
Comparison of tet (X4)-containing contigs assembled from metagenomic sequencing data with plasmid sequences of isolates from a cohort of healthy subjects. Microbiology spectrum 12 (4) (2024)
Yichen Ding, Shuan Er, Abel Tan, Jean-Sebastien Gounot, Woei-Yuh Saw, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
Comparison of tet (X4)-containing contigs assembled from metagenomic sequencing data with plasmid sequences of isolates from a cohort of healthy subjects. Microbiology spectrum (2024)
Aarthi Ravikrishnan, Indrik Wijaya, Eileen Png, Kern Rei Chng, Eliza Xin Pei Ho, Amanda Hui Qi Ng, Ahmad Nazri Mohamed Naim, Jean-Sebastien Gounot, Shou Ping Guan, Jasinda Lee Hanqing, Lihuan Guan, Chenhao Li, Jia Yu Koh, Paola Florez de Sessions, Woon Puay Koh, Lei Feng, Tze Pin Ng, Anis Larbi, Andrea Britta Maier, Brian Keith Kennedy, Niranjan Nagarajan
Gut metagenomes of Asian octogenarians reveal metabolic potential expansion and distinct microbial species associated with aging phenotypes. Nature communications 15 (1) (2024)
Yichen Ding, Shuan Er, Abel Tan, Jean-Sebastien Gounot, Woei-Yuh Saw, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
Comparison of tet (X4)-containing contigs assembled from metagenomic sequencing data with plasmid sequences of isolates from a cohort of healthy subjects. Microbiology spectrum 12 (4) (2024)
Martin Hunt, Angie S Hinrichs, Daniel Paolo Anderson, Lily Karim, Bethany L Dearlove, Jeff Knaggs, Bede Constantinides, Philip W Fowler, Gillian Rodger, Teresa Street, Sheila F Lumley, Hermione Webster, Theo Sanderson, Christopher Ruis, Nicola de Maio, Lucas N Amenga-Etego, Dominic Selorm Yao Amuzu, Martin Avaro, Gordon Akanzuwine Awandare, Reuben Ayivor-Djanie, Matthew Bashton, Elizabeth M Batty, Yaw Bediako, Denise De Belder, Estefania Benedetti, Andreas Bergthaler, Stefan A Boers, Josefina Campos, Rosina Afua Ampomah Carr, Facundo Cuba, Maria Elena Dattero, Wanwisa Dejnirattisai, Alexander T Dilthey, Kwabena Obeng Duedu, Lukas Endler, Ilka Engelmann, Ngiambudulu M Francisco, Jonas Fuchs, Etienne Gnimpieba Z, Soraya Groc, Jones Gyamfi, Dennis Heemskerk, Torsten Houwaart, Nei-Yuan Hsiao, Matthew Huska, Martin Hölzer, Arash Iranzadeh, Hanna Jarva, Chandima Jeewandara, Bani Jolly, Rageema Joseph, Ravi Kant, Karrie Ko Kwan Ki, Satu Kurkela, Maija Lappalainen, Marie Lataretu, Chang Liu, Gathsaurie Neelika Malavige, Tapfumanei Mashe, Juthathip Mongkolsapaya, Brigitte Montes, José Arturo Molina-Mora, Collins Misita Morang'a, Bernard Mvula, Niranjan Nagarajan, Andrew Nelson, Joyce M Ngoi, Joana Paula da Paixão, Marcus Panning, Tomás Javier Poklepovich, Peter Kojo Quashie, Diyanath Ranasinghe, Mara Russo, James Emmanuel San, Nicholas D Sanderson, Vinod Scaria, Gavin Screaton, Tarja A Sironen, Abay Sisay, Darren L Smith, Teemu Smura, Piyada Supasa, Chayaporn Suphavilai, Jeremy Swann, Houriiyah Tegally, Bryan Tegomoh, Olli Vapalahti, Andreas Walker, Robert John Wilkinson, Carolyn Williamson, null null, Tulio de Oliveira, Timothy Ea Peto, Derrick Crook, Russell Corbett-Detig, Zamin Iqbal
Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny. bioRxiv : the preprint server for biology (2024)
Yichen Ding, Shuan Er, Abel Tan, Jean-Sebastien Gounot, Woei-Yuh Saw, Linda Wei Lin Tan, Yik Ying Teo, Niranjan Nagarajan, Henning Seedorf
Comparison of tet (X4)-containing contigs assembled from metagenomic sequencing data with plasmid sequences of isolates from a cohort of healthy subjects. Microbiology spectrum 12 (4) (2024)
Cedric C S Tan, Karrie K K Ko, Hui Chen, Jianjun Liu, Marie Loh, null null, Minghao Chia, Niranjan Nagarajan
No evidence for a common blood microbiome based on a population study of 9,770 healthy humans. Nature microbiology (2023)
Cedric C S Tan, Karrie K K Ko, Hui Chen, Jianjun Liu, Marie Loh, null null, Minghao Chia, Niranjan Nagarajan
No evidence for a common blood microbiome based on a population study of 9,770 healthy humans. Nature microbiology (2023)
Jonathan T L Kang, Jonathan J Y Teo, Denis Bertrand, Amanda Ng, Aarthi Ravikrishnan, Melvin Yong, Oon Tek Ng, Kalisvar Marimuthu, Swaine L Chen, Kern Rei Chng, Yunn-Hwen Gan, Niranjan Nagarajan
Long-term ecological and evolutionary dynamics in the gut microbiomes of carbapenemase-producing Enterobacteriaceae colonized subjects. Nature microbiology 7 (10) (2022)
Karrie Ko Kwan Ki, Kern Rei Chng, Niranjan Nagarajan
Metagenomics-enabled microbial surveillance. Nature microbiology 7 (4) (2022)
Abner Herbert Lim, Zhen Jie Low, Prashant Narendra Shingate, Jing Han Hong, Shu Chen Chong, Cedric Chuan Young Ng, Wei Liu, Robert Vaser, Mile Šikić, Wing-Kin Ken Sung, Niranjan Nagarajan, Patrick Tan, Bin Tean Teh
Genome assembly and chemogenomic profiling of National Flower of Singapore Papilionanthe Miss Joaquim 'Agnes' reveals metabolic pathways regulating floral traits. Communications biology 5 (1) (2022)
Jean-Sebastien Gounot, Minghao Chia, Denis Bertrand, Woei-Yuh Saw, Aarthi Ravikrishnan, Adrian Low, Yichen Ding, Amanda Hui Qi Ng, Linda Wei Lin Tan, Yik-Ying Teo, Henning Seedorf, Niranjan Nagarajan
Genome-centric analysis of short and long read metagenomes reveals uncharacterized microbiome diversity in Southeast Asians. Nature communications 13 (1) (2022)
Fernando Meyer, Adrian Fritz, Zhi-Luo Deng, David Koslicki, Till Robin Lesker, Alexey Gurevich, Gary Robertson, Mohammed Alser, Dmitry Antipov, Francesco Beghini, Denis Bertrand, Jaqueline J Brito, C Titus Brown, Jan P Buchmann, Aydin Buluç, Bo Chen, Rayan Chikhi, Philip Thomas Lanken Conradsen Clausen, Alexandru Cristian, Piotr Wojciech Dabrowski, Aaron E Darling, Rob Egan, Eleazar Eskin, Evangelos Georganas, Eugene Goltsman, Melissa A Gray, Lars Hestbjerg Hansen, Steven Hofmeyr, Pingqin Huang, Luiz Irber, Huijue Jia, Tue Sparholt Jørgensen, Silas D Kieser, Terje Klemetsen, Axel Kola, Mikhail Kolmogorov, Anton Korobeynikov, Jason Kwan, Nathan LaPierre, Claire Lemaitre, Chenhao Li, Antoine Limasset, Fábio Malcher Miranda, Serghei Mangul, Vanessa R Marcelino, Camille Marchet, Pierre Marijon, Dmitry Meleshko, Daniel R Mende, Alessio Milanese, Niranjan Nagarajan, Jakob Nissen, Sergey Nurk, Leonid Oliker, Lucas Paoli, Pierre Peterlongo, Vitor C Piro, Jacob S Porter, Simon Rasmussen, Evan R Rees, Knut Reinert, Bernhard Y Renard, Espen Mikal Robertsen, Gail L Rosen, Hans-Joachim Ruscheweyh, Varuni Sarwal, Nicola Segata, Enrico Seiler, Lizhen Shi, Fengzhu Sun, Shinichi Sunagawa, Søren Johannes Sørensen, Ashleigh Thomas, Chengxuan Tong, Mirko Trajkovski, Julien Tremblay, Gherman Uritskiy, Riccardo Vicedomini, Zhengyang Wang, Ziye Wang, Zhong Wang, Andrew Warren, Nils Peder Willassen, Katherine Yelick, Ronghui You, Georg Zeller, Zhengqiao Zhao, Shanfeng Zhu, Jie Zhu, Ruben Garrido-Oter, Petra Gastmeier, Stéphane Hacquard, Susanne Häußler, Ariane Khaledi, Friederike Maechler, Fantin Mesny, Simona Radutoiu, Paul Schulze-Lefert, Nathiana Smit, Till Strowig, Andreas Bremges, Alexander Sczyrba, Alice Carolyn McHardy
Critical Assessment of Metagenome Interpretation: the second round of challenges. Nature methods 19 (4) (2022)
Kern Rei Chng, Chenhao Li, Denis Bertrand, Amanda Hui Qi Ng, Junmei Samantha Kwah, Hwee Meng Low, Chengxuan Tong, Maanasa Natrajan, Michael Hongjie Zhang, Licheng Xu, Karrie Kwan Ki Ko, Eliza Xin Pei Ho, Tamar V Av-Shalom, Jeanette Woon Pei Teo, Chiea Chuen Khor, null null, Swaine L Chen, Christopher E Mason, Oon Tek Ng, Kalisvar Marimuthu, Brenda Ang, Niranjan Nagarajan
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment. Nature medicine 26 (6) (2020)
Kern Rei Chng, Tarini Shankar Ghosh, Yi Han Tan, Tannistha Nandi, Ivor Russel Lee, Amanda Hui Qi Ng, Chenhao Li, Aarthi Ravikrishnan, Kar Mun Lim, David Lye, Timothy Mark Sebastian Barkham, Karthik Raman, Swaine L Chen, Louis Chai, Barnaby Edward Young, Yunn-Hwen Gan, Niranjan Nagarajan
Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut. Nature ecology & evolution 4 (9) (2020)
Jong Ghut Ashley Aw, Shaun W Lim, Jia Xu Wang, Finnlay R P Lambert, Wen Ting Tan, Yang Shen, Yu Zhang, Pornchai Kaewsapsak, Chenhao Li, Sarah B Ng, Leah A Vardy, Meng How Tan, Niranjan Nagarajan, Yue Wan
Author Correction: Determination of isoform-specific RNA structure with nanopore long reads. Nature biotechnology (2020)
Jong Ghut Ashley Aw, Shaun W Lim, Jia Xu Wang, Finnlay R P Lambert, Wen Ting Tan, Yang Shen, Yu Zhang, Pornchai Kaewsapsak, Chenhao Li, Sarah B Ng, Leah A Vardy, Meng How Tan, Niranjan Nagarajan, Yue Wan
Determination of isoform-specific RNA structure with nanopore long reads. Nature biotechnology 39 (3) (2020)
Denis Bertrand, Jim Shaw, Manesh Kalathiyappan, Amanda Hui Qi Ng, M Senthil Kumar, Chenhao Li, Mirta Dvornicic, Janja Paliska Soldo, Jia Yu Koh, Chengxuan Tong, Oon Tek Ng, Timothy Mark Sebastian Barkham, Barnaby Young, Kalisvar Marimuthu, Kern Rei Chng, Mile Šikić, Niranjan Nagarajan
Hybrid metagenomic assembly enables high-resolution analysis of resistance determinants and mobile elements in human microbiomes. Nature biotechnology 37 (8) (2019)

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Publication Activity (10 Years)

Top Topics

Top Venues

Niranjan Nagarajan