Swaine L Chen (Swaine Chen)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 35

Top Venues

Genome announcements

mBio

Scientific reports

Proceedings of the National Academy of Sciences of the United States of America

Genome Institute of Singapore

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Genome Institute of Singapore

Singapore

Group Leader :: Infectious Diseases

National University of Singapore

Singapore

Associate Professor :: Medicine / Infectious Diseases

Genome Institute of Singapore

Singapore

Senior Research Scientist :: Infectious Diseases

National University of Singapore

Singapore

Assistant Professor :: Medicine / Infectious Diseases

Washington University in Saint Louis School of Medicine

United States

Postdoc :: Molecular Microbiology

Publications

Swaine L Chen, Suma Tiruvayipati, Wen Ying Tang, Timothy Mark Sebastian Barkham
Multilocus sequence typing database for Streptococcus agalactiae contains a spurious allele of the transketolase gene. Microbiology spectrum (2024)
Swaine L Chen, Suma Tiruvayipati, Wen Ying Tang, Timothy Mark Sebastian Barkham
Multilocus sequence typing database for Streptococcus agalactiae contains a spurious allele of the transketolase gene. Microbiology spectrum 12 (9) (2024)
Rafi Rashid, Zeus Jaren Nair, Dominic Ming Hao Chia, Kelvin Kian Long Chong, Amaury Cazenave Gassiot, Stewart A Morley, Doug K Allen, Swaine L Chen, Shu-Sin Chng, Markus R Wenk, Kimberly Ann Kline
Depleting Cationic Lipids Involved in Antimicrobial Resistance Drives Adaptive Lipid Remodeling in Enterococcus faecalis. mBio 14 (1) (2023)
Rafi Rashid, Zeus Jaren Nair, Dominic Ming Hao Chia, Kelvin Kian Long Chong, Amaury Cazenave Gassiot, Stewart A Morley, Doug K Allen, Swaine L Chen, Shu-Sin Chng, Markus R Wenk, Kimberly Ann Kline
Depleting Cationic Lipids Involved in Antimicrobial Resistance Drives Adaptive Lipid Remodeling in Enterococcus faecalis. mBio 14 (1) (2023)
Rafi Rashid, Zeus Jaren Nair, Dominic Ming Hao Chia, Kelvin Kian Long Chong, Amaury Cazenave Gassiot, Stewart A Morley, Doug K Allen, Swaine L Chen, Shu-Sin Chng, Markus R Wenk, Kimberly Ann Kline
Depleting Cationic Lipids Involved in Antimicrobial Resistance Drives Adaptive Lipid Remodeling in Enterococcus faecalis. mBio (2023)
Rafi Rashid, Zeus Jaren Nair, Dominic Ming Hao Chia, Kelvin Kian Long Chong, Amaury Cazenave Gassiot, Stewart A Morley, Doug K Allen, Swaine L Chen, Shu-Sin Chng, Markus R Wenk, Kimberly Ann Kline
Depleting Cationic Lipids Involved in Antimicrobial Resistance Drives Adaptive Lipid Remodeling in Enterococcus faecalis. mBio 14 (1) (2023)
Ye Chean Teh, Ming Yao Chooi, Dehua Liu, Immanuel Kwok, Ghee Chuan Lai, Liyana Ayub Ow Yong, Melissa Shu Feng Ng, Jackson Liang Yao Li, Yingrou Tan, Maximilien Evrard, Leonard Tan, Ka Hang Liong, Keith Weng Kit Leong, Chi Ching Goh, Yong Jie Andrew Chan, Nurhidaya Binte Shadan, Chinmay Kumar Mantri, You Yi Hwang, Hui Cheng, Tao Cheng, Weimiao Yu, Hong Liang Tey, Anis Larbi, Ashley Lauren St John, Veronique Angeli, Christiane Ruedl, Bernett Teck Kwong Lee, Florent Ginhoux, Swaine L Chen, Lai Guan Ng, Jeak Ling Ding, Shu Zhen Chong
Transitional premonocytes emerge in the periphery for host defense against bacterial infections. Science advances 8 (9) (2022)
Varnica Khetrapal, Liyana Ayub Ow Yong, Sylvester Jian Ming Lim, Swaine L Chen
Development of mass allelic exchange, a technique to enable sexual genetics in <i>Escherichia coli</i>. Proceedings of the National Academy of Sciences of the United States of America 119 (45) (2022)
Kyaw Thu Aung, Wei Ching Khor, Kar Hui Ong, Wei Ling Tan, Zhi Ning Wong, Jia Quan Oh, Wai Kwan Wong, Brian Zi Yan Tan, Matthias Maiwald, Nancy Wen Sim Tee, Timothy Mark Sebastian Barkham, Tse Hsien Koh, Anders Dalsgaard, Swaine L Chen, Joergen Schlundt, Lee Ching Ng
Characterisation of Salmonella Enteritidis ST11 and ST1925 Associated with Human Intestinal and Extra-Intestinal Infections in Singapore. International journal of environmental research and public health 19 (9) (2022)
Swaine L Chen, Ying Ding, Anucha Apisarnthanarak, Shirin Kalimuddin, Sophia Archuleta, Sharifah Faridah Syed Omar, Partha Pratim De, Tse Hsien Koh, Kean Lee Chew, Nadia Atiya, Nuntra Suwantarat, Rukumani Devi Velayuthan, Joshua Guo Xian Wong, David C Lye
Author Correction: The higher prevalence of extended spectrum beta-lactamases among Escherichia coli ST131 in Southeast Asia is driven by expansion of a single, locally prevalent subclone. Scientific reports 11 (1) (2021)
Kar Hui Ong, Kyaw Thu Aung, Sharon C M Chan, Swaine L Chen, Lee Ching Ng, Kitiya Vongkamjan
Whole-Genome Sequencing Analysis of Salmonella Isolates from Poultry Farms, a Slaughterhouse, and Retail Stalls in Thailand. Microbiology resource announcements 10 (19) (2021)
Kurosh S Mehershahi, Swaine L Chen
DNA methylation by three Type I restriction modification systems of Escherichia coli does not influence gene regulation of the host bacterium. Nucleic acids research 49 (13) (2021)
Michael E Hibbing, Karen W Dodson, Vasilios Kalas, Swaine L Chen, Scott J Hultgren
Adaptation of Arginine Synthesis among Uropathogenic Branches of the Escherichia coli Phylogeny Reveals Adjustment to the Urinary Tract Habitat. mBio 11 (5) (2020)
Kern Rei Chng, Tarini Shankar Ghosh, Yi Han Tan, Tannistha Nandi, Ivor Russel Lee, Amanda Hui Qi Ng, Chenhao Li, Aarthi Ravikrishnan, Kar Mun Lim, David Lye, Timothy Mark Sebastian Barkham, Karthik Raman, Swaine L Chen, Louis Chai, Barnaby Edward Young, Yunn-Hwen Gan, Niranjan Nagarajan
Metagenome-wide association analysis identifies microbial determinants of post-antibiotic ecological recovery in the gut. Nature ecology & evolution 4 (9) (2020)
Swaine L Chen, Nico M Temme
A Faster and More Accurate Algorithm for Calculating Population Genetics Statistics Requiring Sums of Stirling Numbers of the First Kind. G3 (Bethesda, Md.) 10 (11) (2020)
Shannon N Fenlon, Yuemin Celina Chee, Jacqueline Lai Yuen Chee, Yeen Hui Choy, Alexis Jiaying Khng, Lu Ting Liow, Kurosh S Mehershahi, Xiaoan Ruan, Stephen W Turner, Fei Yao, Swaine L Chen
Sequencing of E. coli strain UTI89 on multiple sequencing platforms. BMC research notes 13 (1) (2020)
Timothy Mark Sebastian Barkham, Ruth N Zadoks, Mohammad Noor Amal Azmai, Stephen Baker, Vu Thi Ngoc Bich, Victoria Chalker, Man Ling Chau, David A B Dance, Rama Narayana Deepak, H Rogier van Doorn, Ramona A Gutierrez, Mark A Holmes, Lan Nguyen Phu Huong, Tse Hsien Koh, Elisabete Martins, Kurosh Mehershahi, Paul Newton, Lee Ching Ng, Nguyen Ngoc Phuoc, Ornuma Sangwichian, Pongpun Sawatwong, Uraiwan Surin, Thean Yen Tan, Wen Ying Tang, Nguyen Vu Thuy, Paul Turner, Manivanh Vongsouvath, Defeng Zhang, Toni Whistler, Swaine L Chen
One hypervirulent clone, sequence type 283, accounts for a large proportion of invasive Streptococcus agalactiae isolated from humans and diseased tilapia in Southeast Asia. PLoS neglected tropical diseases 13 (6) (2019)
Mohammad Arifuzzaman, Yuvon R Mobley, Hae Woong Choi, Pradeep Bist, Cristina A Salinas, Zachary D Brown, Swaine L Chen, Herman F Staats, Soman N Abraham
MRGPR-mediated activation of local mast cells clears cutaneous bacterial infection and protects against reinfection. Science advances 5 (1) (2019)
Swaine L Chen, Ying Ding, Anucha Apisarnthanarak, Shirin Kalimuddin, Sophia Archuleta, Sharifah Faridah Syed Omar, Partha Pratim De, Tse Hsien Koh, Kean Lee Chew, Nadia Atiya, Nuntra Suwantarat, Rukumani Devi Velayuthan, Joshua Guo Xian Wong, David C Lye
The higher prevalence of extended spectrum beta-lactamases among Escherichia coli ST131 in Southeast Asia is driven by expansion of a single, locally prevalent subclone. Scientific reports 9 (1) (2019)
Colin W Russell, Rashmi Sukumaran, Lu Ting Liow, Balamurugan Periaswamy, Shazmina Rafee, Yuemin C Chee, Swaine L Chen
Comprehensive Identification of Fim-Mediated Inversions in Uropathogenic Escherichia coli with Structural Variation Detection Using Relative Entropy. mSphere 4 (2) (2019)
Siyi Chen, Mårten Larsson, Robert C Robinson, Swaine L Chen
Author Correction: Direct and convenient measurement of plasmid stability in lab and clinical isolates of E. coli. Scientific reports 8 (1) (2018)
Suhanya Duraiswamy, Jacqueline L Y Chee, Siyi Chen, Enjun Yang, Kristin Lees, Swaine L Chen
Purification of Intracellular Bacterial Communities during Experimental Urinary Tract Infection Reveals an Abundant and Viable Bacterial Reservoir. Infection and immunity 86 (4) (2018)
Tse H Koh, Nurdyana Binte Abdul Rahman, Jeanette W P Teo, My-Van La, Balamurugan Periaswamy, Swaine L Chen
Draft Genome Sequence of Singapore Klebsiella pneumoniae subsp. pneumoniae Isolate DS32358_14, Which Contains the Carbapenemase Gene blaVIM-1. Genome announcements 6 (1) (2018)
Elizabeth M Batty, Suwittra Chaemchuen, Stuart Blacksell, Allen L Richards, Daniel Paris, Rory Bowden, Caroline Chan, Ramkumar Lachumanan, Nicholas Day, Peter Donnelly, Swaine L Chen, Jeanne Salje
Long-read whole genome sequencing and comparative analysis of six strains of the human pathogen Orientia tsutsugamushi. PLoS neglected tropical diseases 12 (6) (2018)
Justin Y K Soh, Colin W Russell, Shannon N Fenlon, Swaine L Chen
Complete Genome Sequence of Photobacterium leiognathi Strain JS01. Genome announcements 6 (1) (2018)
Shi Thong Heng, Swaine L Chen, Joshua G X Wong, David C Lye, Tat Ming Ng
No association between resistance mutations, empiric antibiotic, and mortality in ceftriaxone-resistant Escherichia coli and Klebsiella pneumoniae bacteremia. Scientific reports 8 (1) (2018)
Tse H Koh, Nurdyana Binte Abdul Rahman, Jeanette W P Teo, My-Van La, Balamurugan Periaswamy, Swaine L Chen
Putative Integrative Mobile Elements That Exploit the Xer Recombination Machinery Carrying blaIMI-Type Carbapenemase Genes in Enterobacter cloacae Complex Isolates in Singapore. Antimicrobial agents and chemotherapy 62 (1) (2017)
Kurosh S Mehershahi, Swaine L Chen
Complete Genome Sequence of the Uropathogenic Escherichia coli Strain NU14. Genome announcements 5 (18) (2017)
Siyi Chen, Mårten Larsson, Robert C Robinson, Swaine L Chen
Direct and convenient measurement of plasmid stability in lab and clinical isolates of E. coli. Scientific reports 7 (1) (2017)
Varnica Khetrapal, Kurosh S Mehershahi, Swaine L Chen
Complete Genome Sequence of the Original Escherichia coli Isolate, Strain NCTC86. Genome announcements 5 (16) (2017)
Swaine L Chen
Virulence profile: Swaine L. Chen. Virulence 8 (5) (2017)
Jacqueline L Y Chee, Miriam Ravins, Emanuel Hanski, Swaine L Chen
Complete Genome Sequence of Streptococcus pyogenes emm14 JS95, a Necrotizing Fasciitis Strain Isolated in Israel. Genome announcements 5 (11) (2017)
Zuowei Wu, Balamurugan Periaswamy, Orhan Sahin, Michael Yaeger, Paul Plummer, Weiwei Zhai, Zhangqi Shen, Lei Dai, Swaine L Chen, Qijing Zhang
Point mutations in the major outer membrane protein drive hypervirulence of a rapidly expanding clone of Campylobacter jejuni. Proceedings of the National Academy of Sciences of the United States of America 113 (38) (2016)
Ivan Sović, Mile Šikić, Andreas Wilm, Shannon Nicole Fenlon, Swaine L Chen, Niranjan Nagarajan
Fast and sensitive mapping of nanopore sequencing reads with GraphMap. Nature communications 7 (2016)
Huibin Zhang, Teodorus T Susanto, Yue Wan, Swaine L Chen
Comprehensive mutagenesis of the fimS promoter regulatory switch reveals novel regulation of type 1 pili in uropathogenic Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America 113 (15) (2016)
Kurosh S Mehershahi, Li Yang Hsu, Tse Hsien Koh, Swaine L Chen
Erratum for Mehershahi et al., Complete Genome Sequence of Streptococcus agalactiae Serotype III, Multilocus Sequence Type 283 Strain SG-M1. Genome announcements 3 (6) (2015)
Varnica Khetrapal, Kurosh Mehershahi, Shazmina Rafee, Siyi Chen, Chiew Ling Lim, Swaine L Chen
A set of powerful negative selection systems for unmodified Enterobacteriaceae. Nucleic acids research 43 (13) (2015)
Kurosh S Mehershahi, Soman N Abraham, Swaine L Chen
Complete Genome Sequence of Uropathogenic Escherichia coli Strain CI5. Genome announcements 3 (3) (2015)
Kurosh S Mehershahi, Li Yang Hsu, Tse Hsien Koh, Swaine L Chen
Complete Genome Sequence of Streptococcus agalactiae Serotype III, Multilocus Sequence Type 283 Strain SG-M1. Genome announcements 3 (5) (2015)

Swaine L Chen.css-eqlu8i{font-size:small;padding-left:4px;} (Swaine Chen)

Publication Activity (10 Years)

Top Topics

Top Venues

Swaine L Chen (Swaine Chen)