Nikos S Hatzakis (Nikos Hatzakis)

ResearcherID Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 57

Top Topics

Single Molecule

Top Venues

The journal of physical chemistry. B

Nature communications

Communications biology

Research square

This page only lists publications with an associated author ORCID identifier.

Publications

Marijonas Tutkus, Christian V Lundgaard, Salome Veshaguri, Asger Tønnesen, Nikos S Hatzakis, Søren G F Rasmussen, Dimitrios Stamou
Probing Activation and Conformational Dynamics of the Vesicle-Reconstituted β 2 Adrenergic Receptor at the Single-Molecule Level. The journal of physical chemistry. B 128 (9) (2024)
Jacob Kæstel-Hansen, Nikos S Hatzakis
Everything, everywhere, almost at once. eLife 13 (2024)
Steen W B Bender, Marcus Winther Dreisler, Min Zhang, Jacob Kæstel-Hansen, Nikos S Hatzakis
SEMORE: SEgmentation and MORphological fingErprinting by machine learning automates super-resolution data analysis. Nature communications 15 (1) (2024)
Nikos S Hatzakis, Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo Correia, Annette Juma Nielsen, Sara Bleshoey, Wouter Boomsma, Tomas Kirchhausen
Deep learning assisted single particle tracking for automated correlation between diffusion and function. Research square (2024)
Anwesha Sanyal, Gustavo Scanavachi, Elliott Somerville, Anand Saminathan, Athul Nair, Athanasios Oikonomou, Nikos S Hatzakis, Tomas Kirchhausen
Constitutive Endolysosomal Perforation in Neurons allows Induction of α-Synuclein Aggregation by Internalized Pre-Formed Fibrils. bioRxiv : the preprint server for biology (2024)
Marijonas Tutkus, Christian V Lundgaard, Salome Veshaguri, Asger Tønnesen, Nikos S Hatzakis, Søren G F Rasmussen, Dimitrios Stamou
Probing Activation and Conformational Dynamics of the Vesicle-Reconstituted β 2 Adrenergic Receptor at the Single-Molecule Level. The journal of physical chemistry. B 128 (9) (2024)
Steen W B Bender, Marcus Winther Dreisler, Min Zhang, Jacob Kæstel-Hansen, Nikos S Hatzakis
SEMORE: SEgmentation and MORphological fingErprinting by machine learning automates super-resolution data analysis. Nature communications 15 (1) (2024)
Ge Huang, Marcus Winther Dreisler, Jacob Kæstel-Hansen, Annette Juma Nielsen, Min Zhang, Nikos S Hatzakis
Defect-Engineered Metal-Organic Frameworks as Nanocarriers for Pharmacotherapy: Insights into Intracellular Dynamics at The Single Particle Level. Advanced materials (Deerfield Beach, Fla.) 36 (35) (2024)
Marijonas Tutkus, Christian V Lundgaard, Salome Veshaguri, Asger Tønnesen, Nikos S Hatzakis, Søren G F Rasmussen, Dimitrios Stamou
Probing Activation and Conformational Dynamics of the Vesicle-Reconstituted β 2 Adrenergic Receptor at the Single-Molecule Level. The journal of physical chemistry. B 128 (9) (2024)
Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo F Bango Da Cunha Correia, Annette Juma Nielsen, Sara Vogt Bleshøy, Wouter Boomsma, Tom Kirchhausen, Nikos S Hatzakis
Deep learning assisted single particle tracking for automated correlation between diffusion and function. Research square (2024)
Nikos S Hatzakis, Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo Correia, Annette Juma Nielsen, Sara Bleshoey, Wouter Boomsma, Tomas Kirchhausen
Deep learning assisted single particle tracking for automated correlation between diffusion and function. Research square (2024)
Ge Huang, Marcus Winther Dreisler, Jacob Kæstel-Hansen, Annette Juma Nielsen, Min Zhang, Nikos S Hatzakis
Defect-Engineered Metal-Organic Frameworks as Nanocarriers for Pharmacotherapy: Insights into Intracellular Dynamics at The Single Particle Level. Advanced materials (Deerfield Beach, Fla.) 36 (35) (2024)
Marijonas Tutkus, Christian V Lundgaard, Salome Veshaguri, Asger Tønnesen, Nikos S Hatzakis, Søren G F Rasmussen, Dimitrios Stamou
Probing Activation and Conformational Dynamics of the Vesicle-Reconstituted β 2 Adrenergic Receptor at the Single-Molecule Level. The journal of physical chemistry. B 128 (9) (2024)
Anwesha Sanyal, Gustavo Scanavachi, Elliott Somerville, Anand Saminathan, Athul Nair, Athanasios Oikonomou, Nikos S Hatzakis, Tomas Kirchhausen
Constitutive Endolysosomal Perforation in Neurons allows Induction of α-Synuclein Aggregation by Internalized Pre-Formed Fibrils. bioRxiv : the preprint server for biology (2024)
Steen W B Bender, Marcus Winther Dreisler, Min Zhang, Jacob Kæstel-Hansen, Nikos S Hatzakis
SEMORE: SEgmentation and MORphological fingErprinting by machine learning automates super-resolution data analysis. Nature communications 15 (1) (2024)
Jacob Kæstel-Hansen, Nikos S Hatzakis
Everything, everywhere, almost at once. eLife 13 (2024)
Ge Huang, Marcus Winther Dreisler, Jacob Kæstel-Hansen, Annette Juma Nielsen, Min Zhang, Nikos S Hatzakis
Defect-Engineered Metal-Organic Frameworks as Nanocarriers for Pharmacotherapy: Insights into Intracellular Dynamics at The Single Particle Level. Advanced materials (Deerfield Beach, Fla.) (2024)
Markus Götz, Anders Barth, Søren S-R Bohr, Richard Börner, Jixin Chen, Thorben Cordes, Dorothy A Erie, Christian Gebhardt, Mélodie C A S Hadzic, George L Hamilton, Nikos S Hatzakis, Thorsten Hugel, Lydia Kisley, Don C Lamb, Carlos de Lannoy, Chelsea Mahn, Dushani Dunukara, Dick de Ridder, Hugo Sanabria, Julia Schimpf, Claus A M Seidel, Roland K O Sigel, Magnus B Sletfjerding, Johannes Thomsen, Leonie Vollmar, Simon Wanninger, Keith R Weninger, Pengning Xu, Sonja Schmid
Reply to: On the statistical foundation of a recent single molecule FRET benchmark. Nature communications 15 (1) (2024)
Ge Huang, Marcus Winther Dreisler, Jacob Kæstel-Hansen, Annette Juma Nielsen, Min Zhang, Nikos S Hatzakis
Defect-Engineered Metal-Organic Frameworks as Nanocarriers for Pharmacotherapy: Insights into Intracellular Dynamics at The Single Particle Level. Advanced materials (Deerfield Beach, Fla.) (2024)
Nikos S Hatzakis, Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo Correia, Annette Juma Nielsen, Sara Bleshoey, Wouter Boomsma, Tomas Kirchhausen
Deep learning assisted single particle tracking for automated correlation between diffusion and function. Research square (2024)
Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo F Bango Da Cunha Correia, Annette Juma Nielsen, Sara Vogt Bleshøy, Wouter Boomsma, Tom Kirchhausen, Nikos S Hatzakis
Deep learning assisted single particle tracking for automated correlation between diffusion and function. Research square (2024)
Markus Götz, Anders Barth, Søren S-R Bohr, Richard Börner, Jixin Chen, Thorben Cordes, Dorothy A Erie, Christian Gebhardt, Mélodie C A S Hadzic, George L Hamilton, Nikos S Hatzakis, Thorsten Hugel, Lydia Kisley, Don C Lamb, Carlos de Lannoy, Chelsea Mahn, Dushani Dunukara, Dick de Ridder, Hugo Sanabria, Julia Schimpf, Claus A M Seidel, Roland K O Sigel, Magnus B Sletfjerding, Johannes Thomsen, Leonie Vollmar, Simon Wanninger, Keith R Weninger, Pengning Xu, Sonja Schmid
Reply to: On the statistical foundation of a recent single molecule FRET benchmark. Nature communications 15 (1) (2024)
Markus Götz, Anders Barth, Søren S-R Bohr, Richard Börner, Jixin Chen, Thorben Cordes, Dorothy A Erie, Christian Gebhardt, Mélodie C A S Hadzic, George L Hamilton, Nikos S Hatzakis, Thorsten Hugel, Lydia Kisley, Don C Lamb, Carlos de Lannoy, Chelsea Mahn, Dushani Dunukara, Dick de Ridder, Hugo Sanabria, Julia Schimpf, Claus A M Seidel, Roland K O Sigel, Magnus B Sletfjerding, Johannes Thomsen, Leonie Vollmar, Simon Wanninger, Keith R Weninger, Pengning Xu, Sonja Schmid
Reply to: On the statistical foundation of a recent single molecule FRET benchmark. Nature communications 15 (1) (2024)
Jacob Kæstel-Hansen, Nikos S Hatzakis
Everything, everywhere, almost at once. eLife 13 (2024)
Anwesha Sanyal, Gustavo Scanavachi, Elliott Somerville, Anand Saminathan, Athul Nair, Athanasios Oikonomou, Nikos S Hatzakis, Tomas Kirchhausen
Constitutive Endolysosomal Perforation in Neurons allows Induction of α-Synuclein Aggregation by Internalized Pre-Formed Fibrils. bioRxiv : the preprint server for biology (2024)
Marijonas Tutkus, Christian V Lundgaard, Salome Veshaguri, Asger Tønnesen, Nikos S Hatzakis, Søren G F Rasmussen, Dimitrios Stamou
Probing Activation and Conformational Dynamics of the Vesicle-Reconstituted β 2 Adrenergic Receptor at the Single-Molecule Level. The journal of physical chemistry. B (2024)
Nils A Benning, Jacob Kæstel-Hansen, Fahad Rashid, Sangwoo Park, Raquel Merino Urteaga, Ting-Wei Liao, Jingzhou Hao, James M Berger, Nikos S Hatzakis, Taekjip Ha
Dimensional Reduction for Single-Molecule Imaging of DNA and Nucleosome Condensation by Polyamines, HP1α and Ki-67. The journal of physical chemistry. B 127 (9) (2023)
Xin Zhou, Anders Wilgaard Sinkjær, Min Zhang, Henrik Dahl Pinholt, Hanne Mørck Nielsen, Nikos S Hatzakis, Marco van de Weert, Vito Foderà
Heterogeneous and Surface-Catalyzed Amyloid Aggregation Monitored by Spatially Resolved Fluorescence and Single Molecule Microscopy. The journal of physical chemistry letters 14 (4) (2023)
Josephine F Iversen, Søren S-R Bohr, Henrik D Pinholt, Matias E Moses, Lars Iversen, Sune M Christensen, Nikos S Hatzakis, Min Zhang
Single-Particle Tracking of Thermomyces lanuginosus Lipase Reveals How Mutations in the Lid Region Remodel Its Diffusion. Biomolecules 13 (4) (2023)
Xin Zhou, Anders Wilgaard Sinkjær, Min Zhang, Henrik Dahl Pinholt, Hanne Mørck Nielsen, Nikos S Hatzakis, Marco van de Weert, Vito Foderà
Heterogeneous and Surface-Catalyzed Amyloid Aggregation Monitored by Spatially Resolved Fluorescence and Single Molecule Microscopy. The journal of physical chemistry letters 14 (4) (2023)
Freja Bohr, Søren S-R Bohr, Narendra Kumar Mishra, Nicolás Sebastian González-Foutel, Henrik Dahl Pinholt, Shunliang Wu, Emilie Milan Nielsen, Min Zhang, Magnus Kjaergaard, Knud Jørgen Jensen, Nikos S Hatzakis
Enhanced hexamerization of insulin via assembly pathway rerouting revealed by single particle studies. Communications biology 6 (1) (2023)
Nils A Benning, Jacob Kæstel-Hansen, Fahad Rashid, Sangwoo Park, Raquel Merino Urteaga, Ting-Wei Liao, Jingzhou Hao, James M Berger, Nikos S Hatzakis, Taekjip Ha
Dimensional Reduction for Single-Molecule Imaging of DNA and Nucleosome Condensation by Polyamines, HP1α and Ki-67. The journal of physical chemistry. B (2023)
Nils A Benning, Jacob Kæstel-Hansen, Fahad Rashid, Sangwoo Park, Raquel Merino Urteaga, Ting-Wei Liao, Jingzhou Hao, James M Berger, Nikos S Hatzakis, Taekjip Ha
Dimensional Reduction for Single-Molecule Imaging of DNA and Nucleosome Condensation by Polyamines, HP1α and Ki-67. The journal of physical chemistry. B 127 (9) (2023)
Jacob Kæstel-Hansen, Marilina de Sautu, Anand Saminathan, Gustavo Scanavachi, Ricardo F Bango Da Cunha Correia, Annette Juma Nielsen, Sara Vogt Bleshøy, Wouter Boomsma, Tomas Kirchhausen, Nikos S Hatzakis
Deep learning assisted single particle tracking for automated correlation between diffusion and function. bioRxiv : the preprint server for biology (2023)
Xin Zhou, Anders Wilgaard Sinkjær, Min Zhang, Henrik Dahl Pinholt, Hanne Mørck Nielsen, Nikos S Hatzakis, Marco van de Weert, Vito Foderà
Heterogeneous and Surface-Catalyzed Amyloid Aggregation Monitored by Spatially Resolved Fluorescence and Single Molecule Microscopy. The journal of physical chemistry letters (2023)
Josephine F Iversen, Søren S-R Bohr, Henrik D Pinholt, Matias E Moses, Lars Iversen, Sune M Christensen, Nikos S Hatzakis, Min Zhang
Single-Particle Tracking of Thermomyces lanuginosus Lipase Reveals How Mutations in the Lid Region Remodel Its Diffusion. Biomolecules 13 (4) (2023)
Nils A Benning, Jacob Kæstel-Hansen, Fahad Rashid, Sangwoo Park, Raquel Merino Urteaga, Ting-Wei Liao, Jingzhou Hao, James M Berger, Nikos S Hatzakis, Taekjip Ha
Dimensional Reduction for Single-Molecule Imaging of DNA and Nucleosome Condensation by Polyamines, HP1α and Ki-67. The journal of physical chemistry. B 127 (9) (2023)
Nils A Benning, Jacob Kæstel-Hansen, Fahad Rashid, Sangwoo Park, Raquel Merino Urteaga, Ting-Wei Liao, Jingzhou Hao, James M Berger, Nikos S Hatzakis, Taekjip Ha
Dimensional Reduction for Single-Molecule Imaging of DNA and Nucleosome Condensation by Polyamines, HP1α and Ki-67. The journal of physical chemistry. B 127 (9) (2023)
Freja Bohr, Søren S-R Bohr, Narendra Kumar Mishra, Nicolás Sebastian González-Foutel, Henrik Dahl Pinholt, Shunliang Wu, Emilie Milan Nielsen, Min Zhang, Magnus Kjaergaard, Knud Jørgen Jensen, Nikos S Hatzakis
Enhanced hexamerization of insulin via assembly pathway rerouting revealed by single particle studies. Communications biology 6 (1) (2023)
Freja Bohr, Søren S-R Bohr, Narendra Kumar Mishra, Nicolás Sebastian González-Foutel, Henrik Dahl Pinholt, Shunliang Wu, Emilie Milan Nielsen, Min Zhang, Magnus Kjaergaard, Knud Jørgen Jensen, Nikos S Hatzakis
Enhanced hexamerization of insulin via assembly pathway rerouting revealed by single particle studies. Communications biology 6 (1) (2023)
Josephine F Iversen, Søren S-R Bohr, Henrik D Pinholt, Matias E Moses, Lars Iversen, Sune M Christensen, Nikos S Hatzakis, Min Zhang
Single-Particle Tracking of Thermomyces lanuginosus Lipase Reveals How Mutations in the Lid Region Remodel Its Diffusion. Biomolecules 13 (4) (2023)
Freja Bohr, Søren S-R Bohr, Narendra Kumar Mishra, Nicolás Sebastian González-Foutel, Henrik Dahl Pinholt, Shunliang Wu, Emilie Milan Nielsen, Min Zhang, Magnus Kjaergaard, Knud Jørgen Jensen, Nikos S Hatzakis
Enhanced hexamerization of insulin via assembly pathway rerouting revealed by single particle studies. Communications biology 6 (1) (2023)
Markus Götz, Anders Barth, Søren S-R Bohr, Richard Börner, Jixin Chen, Thorben Cordes, Dorothy A Erie, Christian Gebhardt, Mélodie C A S Hadzic, George L Hamilton, Nikos S Hatzakis, Thorsten Hugel, Lydia Kisley, Don C Lamb, Carlos de Lannoy, Chelsea Mahn, Dushani Dunukara, Dick de Ridder, Hugo Sanabria, Julia Schimpf, Claus A M Seidel, Roland K O Sigel, Magnus Berg Sletfjerding, Johannes Thomsen, Leonie Vollmar, Simon Wanninger, Keith R Weninger, Pengning Xu, Sonja Schmid
A blind benchmark of analysis tools to infer kinetic rate constants from single-molecule FRET trajectories. Nature communications 13 (1) (2022)
Min Zhang, Henrik D Pinholt, Xin Zhou, Søren S-R Bohr, Luca Banetta, Alessio Zaccone, Vito Foderà, Nikos S Hatzakis
Direct observation of heterogeneous formation of amyloid spherulites in real-time by super-resolution microscopy. Communications biology 5 (1) (2022)
Mette Galsgaard Malle, Philipp M G Löffler, Søren S-R Bohr, Magnus Berg Sletfjerding, Nikolaj Alexander Risgaard, Simon Bo Jensen, Min Zhang, Per Hedegård, Stefan Vogel, Nikos S Hatzakis
Single-particle combinatorial multiplexed liposome fusion mediated by DNA. Nature chemistry 14 (5) (2022)
Sarina Veit, Laura Charlotte Paweletz, Søren S-R Bohr, Anant K Menon, Nikos S Hatzakis, Thomas Günther Pomorski
Single Vesicle Fluorescence-Bleaching Assay for Multi-Parameter Analysis of Proteoliposomes by Total Internal Reflection Fluorescence Microscopy. ACS applied materials & interfaces 14 (26) (2022)
Thomas Holmstrøm, Mette Galsgaard Malle, Shunliang Wu, Knud Jørgen Jensen, Nikos S Hatzakis, Christian Marcus Pedersen
Carbohydrate-Derived Metal-Chelator-Triggered Lipids for Liposomal Drug Delivery. Chemistry (Weinheim an der Bergstrasse, Germany) 27 (23) (2021)
Henrik D Pinholt, Søren S-R Bohr, Josephine F Iversen, Wouter Boomsma, Nikos S Hatzakis
Single-particle diffusional fingerprinting: A machine-learning framework for quantitative analysis of heterogeneous diffusion. Proceedings of the National Academy of Sciences of the United States of America 118 (31) (2021)
Matias E Moses, Philip M Lund, Søren S-R Bohr, Josephine F Iversen, Jacob Kæstel-Hansen, Amalie S Kallenbach, Lars Iversen, Sune M Christensen, Nikos S Hatzakis
Single-Molecule Study of Thermomyces lanuginosus Lipase in a Detergency Application System Reveals Diffusion Pattern Remodeling by Surfactants and Calcium. ACS applied materials & interfaces 13 (28) (2021)
Simon Bo Jensen, Sara Thodberg, Shaheena Parween, Matias E Moses, Cecilie C Hansen, Johannes Thomsen, Magnus Berg Sletfjerding, Camilla Knudsen, Rita Del Giudice, Philip M Lund, Patricia R Castaño, Yanet G Bustamante, Maria Natalia Rojas Velazquez, Flemming Steen Jørgensen, Amit V Pandey, Tomas Laursen, Birger Lindberg Møller, Nikos S Hatzakis
Biased cytochrome P450-mediated metabolism via small-molecule ligands binding P450 oxidoreductase. Nature communications 12 (1) (2021)
Johannes Thomsen, Magnus Berg Sletfjerding, Simon Bo Jensen, Stefano Stella, Bijoya Paul, Mette Galsgaard Malle, Guillermo Montoya, Troels Christian Petersen, Nikos S Hatzakis
DeepFRET, a software for rapid and automated single-molecule FRET data classification using deep learning. eLife 9 (2020)
Søren S-R Bohr, Camilla Thorlaksen, Ronja Marie Kühnel, Thomas Günther-Pomorski, Nikos S Hatzakis
Label-Free Fluorescence Quantification of Hydrolytic Enzyme Activity on Native Substrates Reveals How Lipase Function Depends on Membrane Curvature. Langmuir : the ACS journal of surfaces and colloids 36 (23) (2020)
Søren S-R Bohr, Philip M Lund, Amalie S Kallenbach, Henrik Pinholt, Johannes Thomsen, Lars Iversen, Allan Svendsen, Sune M Christensen, Nikos S Hatzakis
Direct observation of Thermomyces lanuginosus lipase diffusional states by Single Particle Tracking and their remodeling by mutations and inhibition. Scientific reports 9 (1) (2019)
Feng Wan, Søren S-R Bohr, Sylvia Natalie Kłodzińska, Haidar Jumaa, Zheng Huang, Tommy Nylander, Mikkel Boas Thygesen, Kasper Kildegaard Sørensen, Knud Jørgen Jensen, Claus Sternberg, Nikos S Hatzakis, Hanne Mørck Nielsen
Ultrasmall TPGS-PLGA Hybrid Nanoparticles for Site-Specific Delivery of Antibiotics into Pseudomonas aeruginosa Biofilms in Lungs. ACS applied materials & interfaces 12 (1) (2019)
Rasmus P Thomsen, Mette Galsgaard Malle, Anders Hauge Okholm, Swati Krishnan, Søren S-R Bohr, Rasmus Schøler Sørensen, Oliver Ries, Stefan Vogel, Friedrich C Simmel, Nikos S Hatzakis, Jørgen Kjems
A large size-selective DNA nanopore with sensing applications. Nature communications 10 (1) (2019)
Krutika Bavishi, Darui Li, Stine Eiersholt, Emma N Hooley, Troels C Petersen, Birger Lindberg Møller, Nikos S Hatzakis, Tomas Laursen
Direct observation of multiple conformational states in Cytochrome P450 oxidoreductase and their modulation by membrane environment and ionic strength. Scientific reports 8 (1) (2018)
Kadla R Rosholm, Natascha Leijnse, Anna Mantsiou, Vadym Tkach, Søren L Pedersen, Volker F Wirth, Lene Broeng Oddershede, Knud J Jensen, Karen L Martinez, Nikos S Hatzakis, Poul Martin Bendix, Andrew Callan-Jones, Dimitrios Stamou
Membrane curvature regulates ligand-specific membrane sorting of GPCRs in living cells. Nature chemical biology 13 (7) (2017)