Nir Friedman

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 15

Top Venues

Molecular systems biology

Nature biotechnology

eLife

Nature communications

Hebrew University of Jerusalem

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Hebrew University of Jerusalem

Israel

Professor :: School of Computer Science & Engineering

University of California Berkeley

United States

Post-doctoral fellow :: Computer Science

Education History

Stanford University

United States

PHD :: Computer Science

Weizmann Institute of Science

Israel

MSC :: Math & Computer Science

Tel Aviv University

Israel

BSC :: Computer Science

Publications

Haiyue Liu, Roberto Arsiè, Daniel Schwabe, Marcel Schilling, Igor Minia, Jonathan Alles, Anastasiya Boltengagen, Christine Kocks, Martin Falcke, Nir Friedman, Markus Landthaler, Nikolaus Rajewsky
SLAM-Drop-seq reveals mRNA kinetic rates throughout the cell cycle. Molecular systems biology 19 (10) (2023)
Haiyue Liu, Roberto Arsiè, Daniel Schwabe, Marcel Schilling, Igor Minia, Jonathan Alles, Anastasiya Boltengagen, Christine Kocks, Martin Falcke, Nir Friedman, Markus Landthaler, Nikolaus Rajewsky
SLAM-Drop-seq reveals mRNA kinetic rates throughout the cell cycle. Molecular systems biology 19 (10) (2023)
Haiyue Liu, Roberto Arsiè, Daniel Schwabe, Marcel Schilling, Igor Minia, Jonathan Alles, Anastasiya Boltengagen, Christine Kocks, Martin Falcke, Nir Friedman, Markus Landthaler, Nikolaus Rajewsky
SLAM-Drop-seq reveals mRNA kinetic rates throughout the cell cycle. Molecular systems biology 19 (10) (2023)
Lorinc Sandor Pongor, Christopher W Schultz, Lorenzo Rinaldi, Darawalee Wangsa, Christophe E Redon, Nobuyuki Takahashi, Gavriel Fialkoff, Parth Desai, Yang Zhang, Sandra Sczerba Burkett, Nadav Hermoni, Noa Vilk, Jenia Gutin, Gergely Rona, Yongmei Zhao, Samantha Nichols, Rasa Vilimas, Linda Sciuto, Chante Graham, Juan Manuel Caravaca, Sevilay Turan, Tsai-Wei Shen, Vinodh N Rajapakse, Rajesh Kumar, Deep Upadhyay, Suresh Kumar, Yoo-Sun Kim, Nitin Roper, Bao Tran, Stephen M Hewitt, David E Kleiner, Mirit I Aladjem, Nir Friedman, Gordon L Hager, Yves Pommier, Thomas Ried, Anish Thomas
Extrachromosomal DNA Amplification Contributes to Small Cell Lung Cancer Heterogeneity and is Associated with Worse Outcomes. Cancer discovery (2023)
Haiyue Liu, Roberto Arsiè, Daniel Schwabe, Marcel Schilling, Igor Minia, Jonathan Alles, Anastasiya Boltengagen, Christine Kocks, Martin Falcke, Nir Friedman, Markus Landthaler, Nikolaus Rajewsky
SLAM-Drop-seq reveals mRNA kinetic rates throughout the cell cycle. Molecular systems biology 19 (10) (2023)
Alon Chappleboim, Daphna Joseph-Strauss, Omer Gershon, Nir Friedman
Transcription feedback dynamics in the wake of cytoplasmic mRNA degradation shutdown. Nucleic acids research 50 (10) (2022)
Bayan Mashahreh, Shir Armony, Kristoffer Enøe Johansson, Alon Chappleboim, Nir Friedman, Richard G Gardner, Rasmus Hartmann-Petersen, Kresten Lindorff-Larsen, Tommer Ravid
Conserved degronome features governing quality control associated proteolysis. Nature communications 13 (1) (2022)
Alon Chappleboim, Daphna Joseph-Strauss, Ayelet Rahat, Israa Sharkia, Miriam Adam, Daniel Kitsberg, Gavriel Fialkoff, Matan Lotem, Omer Gershon, Anna-Kristina Schmidtner, Esther Oiknine-Djian, Agnes Klochendler, Ronen Sadeh, Yuval Dor, Dana G Wolf, Naomi Habib, Nir Friedman
Early sample tagging and pooling enables simultaneous SARS-CoV-2 detection and variant sequencing. Science translational medicine 13 (618) (2021)
Ronen Sadeh, Israa Sharkia, Gavriel Fialkoff, Ayelet Rahat, Jenia Gutin, Alon Chappleboim, Mor Nitzan, Ilana Fox-Fisher, Daniel Neiman, Guy Meler, Zahala Kamari, Dayana Yaish, Tamar Peretz, Ayala Hubert, Jonathan Eliezer Cohen, Azzam Salah, Mark Temper, Albert Grinshpun, Myriam Maoz, Samir Abu-Gazala, Ami Ben Ya'acov, Eyal Shteyer, Rifaat Safadi, Tommy Kaplan, Ruth Shemer, David Planer, Eithan Galun, Benjamin Glaser, Aviad Zick, Yuval Dor, Nir Friedman
ChIP-seq of plasma cell-free nucleosomes identifies gene expression programs of the cells of origin. Nature biotechnology 39 (5) (2021)
Noa Moriel, Enes Senel, Nir Friedman, Nikolaus Rajewsky, Nikos Karaiskos, Mor Nitzan
NovoSpaRc: flexible spatial reconstruction of single-cell gene expression with optimal transport. Nature protocols 16 (9) (2021)
Jenia Gutin, Daphna Joseph-Strauss, Amit Sadeh, Eli Shalom, Nir Friedman
Genetic screen of the yeast environmental stress response dynamics uncovers distinct regulatory phases. Molecular systems biology 15 (8) (2020)
Ivan Haralampiev, Simon Prisner, Mor Nitzan, Matthias Schade, Fabian Jolmes, Max Schreiber, Maria Loidolt-Krüger, Kalle Jongen, Jasmine Chamiolo, Niklaas Nilson, Franziska Winter, Nir Friedman, Oliver Seitz, Thorsten Wolff, Andreas Herrmann
Selective flexible packaging pathways of the segmented genome of influenza A virus. Nature communications 11 (1) (2020)
Carl G de Boer, Eeshit Dhaval Vaishnav, Ronen Sadeh, Esteban Luis Abeyta, Nir Friedman, Aviv Regev
Deciphering eukaryotic gene-regulatory logic with 100 million random promoters. Nature biotechnology 38 (1) (2019)
Meytal Radzinski, Rosi Fassler, Ohad Yogev, William Breuer, Nadav Shai, Jenia Gutin, Sidra Ilyas, Yifat Geffen, Sabina Tsytkin-Kirschenzweig, Yaakov Nahmias, Tommer Ravid, Nir Friedman, Maya Schuldiner, Dana Reichmann
Temporal profiling of redox-dependent heterogeneity in single cells. eLife 7 (2018)
Yuichi Ichikawa, Caitlin F Connelly, Alon Appleboim, Thomas Cr Miller, Hadas Jacobi, Nebiyu A Abshiru, Hsin-Jung Chou, Yuanyuan Chen, Upasna Sharma, Yupeng Zheng, Paul M Thomas, Hsuiyi V Chen, Vineeta Bajaj, Christoph W Müller, Michael P Snyder, Nir Friedman, Daniel Na Bolon, Oliver J Rando, Paul D Kaufman
A synthetic biology approach to probing nucleosome symmetry. eLife 6 (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Nir Friedman