Paola Paci

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 27

Top Topics

Diffusion Weighted

Network Analysis

Metastatic Colorectal Cancer

Gene Expression

Top Venues

BMC bioinformatics

Scientific reports

This page only lists publications with an associated author ORCID identifier.

Publications

Giulia Fiscon, Alessio Funari, Paola Paci
Circular RNA mediated gene regulation in human breast cancer: A bioinformatics analysis. PloS one 18 (7) (2023)
Marianna Vitiello, Alberto Mercatanti, Maurizio Salvatore Podda, Caterina Baldanzi, Antonella Prantera, Samanta Sarti, Milena Rizzo, Alessandra Salvetti, Federica Conte, Giulia Fiscon, Paola Paci, Laura Poliseno
A Network of MicroRNAs and mRNAs Involved in Melanosome Maturation and Trafficking Defines the Lower Response of Pigmentable Melanoma Cells to Targeted Therapy. Cancers 15 (3) (2023)
Marianna Vitiello, Alberto Mercatanti, Maurizio Salvatore Podda, Caterina Baldanzi, Antonella Prantera, Samanta Sarti, Milena Rizzo, Alessandra Salvetti, Federica Conte, Giulia Fiscon, Paola Paci, Laura Poliseno
A Network of MicroRNAs and mRNAs Involved in Melanosome Maturation and Trafficking Defines the Lower Response of Pigmentable Melanoma Cells to Targeted Therapy. Cancers 15 (3) (2023)
Susanna Amadio, Federica Conte, Giorgia Esposito, Giulia Fiscon, Paola Paci, Cinzia Volonté
Repurposing Histaminergic Drugs in Multiple Sclerosis. International journal of molecular sciences 23 (11) (2022)
Paola Paci, Giulia Fiscon
SPINNAKER: an R-based tool to highlight key RNA interactions in complex biological networks. BMC bioinformatics 23 (1) (2022)
Silvia Tiberti, Carlotta Catozzi, Ottavio Croci, Mattia Ballerini, Danilo Cagnina, Chiara Soriani, Caterina Scirgolea, Zheng Gong, Jiatai He, Angeli D Macandog, Amir Nabinejad, Carina B Nava Lauson, Arianna Quinte', Giovanni Bertalot, Wanda L Petz, Simona P Ravenda, Valerio Licursi, Paola Paci, Marco Rasponi, Luca Rotta, Nicola Fazio, Guangwen Ren, Uberto Fumagalli Romario, Martin H Schaefer, Stefano Campaner, Enrico Lugli, Luigi Nezi, Teresa Manzo
Author Correction: GZMK high CD8 + T effector memory cells are associated with CD15 high neutrophil abundance in non-metastatic colorectal tumors and predict poor clinical outcome. Nature communications 13 (1) (2022)
Federica Conte, Pasquale Sibilio, Anna Maria Grimaldi, Marco Salvatore, Paola Paci, Mariarosaria Incoronato
In silico recognition of a prognostic signature in basal-like breast cancer patients. PloS one 17 (2) (2022)
Paola Paci, Giulia Fiscon, Federica Conte, Rui-Sheng Wang, Diane E Handy, Lorenzo Farina, Joseph Loscalzo
Comprehensive network medicine-based drug repositioning via integration of therapeutic efficacy and side effects. NPJ systems biology and applications 8 (1) (2022)
Silvia Tiberti, Carlotta Catozzi, Ottavio Croci, Mattia Ballerini, Danilo Cagnina, Chiara Soriani, Caterina Scirgolea, Zheng Gong, Jiatai He, Angeli D Macandog, Amir Nabinejad, Carina B Nava Lauson, Arianna Quinte', Giovanni Bertalot, Wanda L Petz, Simona P Ravenda, Valerio Licursi, Paola Paci, Marco Rasponi, Luca Rotta, Nicola Fazio, Guangwen Ren, Uberto Fumagalli Romario, Martin H Schaefer, Stefano Campaner, Enrico Lugli, Luigi Nezi, Teresa Manzo
GZMK high CD8 + T effector memory cells are associated with CD15 high neutrophil abundance in non-metastatic colorectal tumors and predict poor clinical outcome. Nature communications 13 (1) (2022)
Marcella Bonanomi, Noemi Salmistraro, Giulia Fiscon, Federica Conte, Paola Paci, Valentina Bravatà, Giusi Irma Forte, Tatiana Volpari, Manuela Scorza, Fabrizia Mastroianni, Stefano D'Errico, Elenio Avolio, Gennaro Piccialli, Anna Maria Colangelo, Marco Vanoni, Daniela Gaglio, Lilia Alberghina
Transcriptomics and Metabolomics Integration Reveals Redox-Dependent Metabolic Rewiring in Breast Cancer Cells. Cancers 13 (20) (2021)
Giulia Fiscon, Federica Conte, Susanna Amadio, Cinzia Volonté, Paola Paci
Drug Repurposing: A Network-based Approach to Amyotrophic Lateral Sclerosis. Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics 18 (3) (2021)
Valeria Panebianco, Paola Paci, Martina Pecoraro, Federica Conte, Giorgia Carnicelli, Zein Mersini Besharat, Giuseppina Catanzaro, Elena Splendiani, Alessandro Sciarra, Lorenzo Farina, Carlo Catalano, Elisabetta Ferretti
Network Analysis Integrating microRNA Expression Profiling with MRI Biomarkers and Clinical Data for Prostate Cancer Early Detection: A Proof of Concept Study. Biomedicines 9 (10) (2021)
Paola Paci, Giulia Fiscon, Federica Conte, Rui-Sheng Wang, Lorenzo Farina, Joseph Loscalzo
Gene co-expression in the interactome: moving from correlation toward causation via an integrated approach to disease module discovery. NPJ systems biology and applications 7 (1) (2021)
Giulia Fiscon, Paola Paci
SAveRUNNER: an R-based tool for drug repurposing. BMC bioinformatics 22 (1) (2021)
Giulia Fiscon, Federica Conte, Lorenzo Farina, Paola Paci
SAveRUNNER: A network-based algorithm for drug repurposing and its application to COVID-19. PLoS computational biology 17 (2) (2021)
Paola Paci, Giulia Fiscon, Federica Conte, Valerio Licursi, Jarrett Morrow, Craig Hersh, Michael H Cho, Peter Castaldi, Kimberly Glass, Edwin K Silverman, Lorenzo Farina
Integrated transcriptomic correlation network analysis identifies COPD molecular determinants. Scientific reports 10 (1) (2020)
Edwin K Silverman, Harald H H W Schmidt, Eleni Anastasiadou, Lucia Altucci, Marco Angelini, Lina Badimón, Jean-Luc Balligand, Giuditta Benincasa, Giovambattista Capasso, Federica Conte, Antonella Di Costanzo, Lorenzo Farina, Giulia Fiscon, Laurent Gatto, Michele Gentili, Joseph Loscalzo, Cinzia Marchese, Claudio Napoli, Paola Paci, Manuela Petti, John Quackenbush, Paolo Tieri, Davide Viggiano, Gemma Vilahur, Kimberly Glass, Jan Baumbach
Molecular networks in Network Medicine: Development and applications. Wiley interdisciplinary reviews. Systems biology and medicine 12 (6) (2020)
Pamela Vernocchi, Tommaso Gili, Federica Conte, Federica Del Chierico, Giorgia Conta, Alfredo Miccheli, Andrea Botticelli, Paola Paci, Guido Caldarelli, Marianna Nuti, Marina Chiara Garassino, Lorenza Putignani
Network Analysis of Gut Microbiome and Metabolome to Discover Microbiota-Linked Biomarkers in Patients Affected by Non-Small Cell Lung Cancer. International journal of molecular sciences 21 (22) (2020)
Anna Maria Grimaldi, Federica Conte, Katia Pane, Giulia Fiscon, Peppino Mirabelli, Simona Baselice, Rosa Giannatiempo, Francesco Messina, Monica Franzese, Marco Salvatore, Paola Paci, Mariarosaria Incoronato
The New Paradigm of Network Medicine to Analyze Breast Cancer Phenotypes. International journal of molecular sciences 21 (18) (2020)
Gabriele Magris, Gabriele Di Gaspero, Fabio Marroni, Sara Zenoni, Giovanni Battista Tornielli, Mirko Celii, Emanuele De Paoli, Mario Pezzotti, Federica Conte, Paola Paci, Michele Morgante
Genetic, epigenetic and genomic effects on variation of gene expression among grape varieties. The Plant journal : for cell and molecular biology 99 (5) (2019)
Carlo Capalbo, Francesca Belardinilli, Domenico Raimondo, Edoardo Milanetti, Umberto Malapelle, Pasquale Pisapia, Valentina Magri, Alessandra Prete, Silvia Pecorari, Mariarosaria Colella, Anna Coppa, Caterina Bonfiglio, Arianna Nicolussi, Virginia Valentini, Alessandra Tessitore, Beatrice Cardinali, Marialaura Petroni, Paola Infante, Matteo Santoni, Marco Filetti, Valeria Colicchia, Paola Paci, Silvia Mezi, Flavia Longo, Enrico Cortesi, Paolo Marchetti, Giancarlo Troncone, Diana Bellavia, Gianluca Canettieri
A Simplified Genomic Profiling Approach Predicts Outcome in Metastatic Colorectal Cancer. Cancers 11 (2) (2019)
Rosa Falcone, Federica Conte, Giulia Fiscon, Valeria Pecce, Marialuisa Sponziello, Cosimo Durante, Lorenzo Farina, Sebastiano Filetti, Paola Paci, Antonella Verrienti
BRAFV600E-mutant cancers display a variety of networks by SWIM analysis: prediction of vemurafenib clinical response. Endocrine 64 (2) (2019)
Valerio Licursi, Federica Conte, Giulia Fiscon, Paola Paci
MIENTURNET: an interactive web tool for microRNA-target enrichment and network-based analysis. BMC bioinformatics 20 (1) (2019)
Giulia Fiscon, Federica Conte, Valerio Licursi, Sergio Nasi, Paola Paci
Computational identification of specific genes for glioblastoma stem-like cells identity. Scientific reports 8 (1) (2018)
Giulia Fiscon, Federica Conte, Valerio Licursi, Sergio Nasi, Paola Paci
Publisher Correction: Computational identification of specific genes for glioblastoma stem-like cells identity. Scientific reports 8 (1) (2018)
Giulia Fiscon, Federica Conte, Lorenzo Farina, Paola Paci
Network-Based Approaches to Explore Complex Biological Systems towards Network Medicine. Genes 9 (9) (2018)
Federica Conte, Giulia Fiscon, Matteo Chiara, Teresa Colombo, Lorenzo Farina, Paola Paci
Role of the long non-coding RNA PVT1 in the dysregulation of the ceRNA-ceRNA network in human breast cancer. PloS one 12 (2) (2017)