Peter A C 't Hoen

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 35

Top Venues

Nature communications

European journal of human genetics : EJHG

Blood

Biomolecules

Radboud Universitair Medisch Centrum

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Radboud Universitair Medisch Centrum Feb 01 2018

Netherlands

Professor of Bioinformatics :: Centre for Molecular and Biomolecular Informatics

Publications

Kyra J Fuchs, Marian van de Meent, M Willy Honders, Indu Khatri, Michel G D Kester, Eva A S Koster, Georgia Koutsoumpli, Arnoud H de Ru, Cornelis A M van Bergen, Peter A van Veelen, Peter A C 't Hoen, Peter van Balen, Erik Ben van den Akker, Joan Hendrik Veelken, Constantijn Jm Jm Halkes, J H Frederik Falkenburg, Marieke Griffioen
Expanding the repertoire reveals recurrent, cryptic, and hematopoietic HLA class I minor histocompatibility antigens. Blood 143 (18) (2024)
Anna Niehues, Casper de Visser, Fiona A Hagenbeek, Purva Kulkarni, René Pool, Naama Karu, Alida S D Kindt, Gurnoor Singh, R R J M Robert Vermeiren, Dorret I Boomsma, Jenny Van Dongen, Peter A C 't Hoen, Alain J van Gool
A multi-omics data analysis workflow packaged as a FAIR Digital Object. GigaScience 13 (2024)
Anna Niehues, Casper de Visser, Fiona A Hagenbeek, Purva Kulkarni, René Pool, Naama Karu, Alida S D Kindt, Gurnoor Singh, R R J M Robert Vermeiren, Dorret I Boomsma, Jenny Van Dongen, Peter A C 't Hoen, Alain J van Gool
A multi-omics data analysis workflow packaged as a FAIR Digital Object. GigaScience 13 (2024)
Iker Núñez-Carpintero, Maria Rigau, Mattia Bosio, Emily O'Connor, Sally Spendiff, Yoshiteru Azuma, Ana Topf, Rachel Thompson, Peter A C 't Hoen, Teodora Chamova, Ivailo Tournev, Velina Guergueltcheva, Steven Laurie, Sergi Beltran, Salvador Capella, Davide Cirillo, Hanns Lochmüller, Alfonso Valencia
Rare disease research workflow using multilayer networks elucidates the molecular determinants of severity in Congenital Myasthenic Syndromes. Nature communications 15 (1) (2024)
Iker Núñez-Carpintero, Maria Rigau, Mattia Bosio, Emily O'Connor, Sally Spendiff, Yoshiteru Azuma, Ana Topf, Rachel Thompson, Peter A C 't Hoen, Teodora Chamova, Ivailo Tournev, Velina Guergueltcheva, Steven Laurie, Sergi Beltran, Salvador Capella, Davide Cirillo, Hanns Lochmüller, Alfonso Valencia
Rare disease research workflow using multilayer networks elucidates the molecular determinants of severity in Congenital Myasthenic Syndromes. Nature communications 15 (1) (2024)
Kyra J Fuchs, Marian van de Meent, Maria W Honders, Indu Khatri, Michel G D Kester, Eva A S Koster, Georgia Koutsoumpli, Arnoud H de Ru, Cornelis A M van Bergen, Peter A van Veelen, Peter A C 't Hoen, Peter van Balen, Erik Ben van den Akker, Hendrik Veelken, Constantijn Jm Jm Halkes, J H Frederik Falkenburg, Marieke Griffioen
Expanding the repertoire reveals recurrent, cryptic and hematopoietic HLA class I minor histocompatibility antigens. Blood (2024)
Iker Núñez-Carpintero, Maria Rigau, Mattia Bosio, Emily O'Connor, Sally Spendiff, Yoshiteru Azuma, Ana Topf, Rachel Thompson, Peter A C 't Hoen, Teodora Chamova, Ivailo Tournev, Velina Guergueltcheva, Steven Laurie, Sergi Beltran, Salvador Capella, Davide Cirillo, Hanns Lochmüller, Alfonso Valencia
Rare disease research workflow using multilayer networks elucidates the molecular determinants of severity in Congenital Myasthenic Syndromes. Nature communications 15 (1) (2024)
Kyra J Fuchs, Marian van de Meent, M Willy Honders, Indu Khatri, Michel G D Kester, Eva A S Koster, Georgia Koutsoumpli, Arnoud H de Ru, Cornelis A M van Bergen, Peter A van Veelen, Peter A C 't Hoen, Peter van Balen, Erik Ben van den Akker, Joan Hendrik Veelken, Constantijn Jm Jm Halkes, J H Frederik Falkenburg, Marieke Griffioen
Expanding the repertoire reveals recurrent, cryptic, and hematopoietic HLA class I minor histocompatibility antigens. Blood 143 (18) (2024)
Kyra J Fuchs, Marian van de Meent, Maria W Honders, Indu Khatri, Michel G D Kester, Eva A S Koster, Georgia Koutsoumpli, Arnoud H de Ru, Cornelis A M van Bergen, Peter A van Veelen, Peter A C 't Hoen, Peter van Balen, Erik Ben van den Akker, Hendrik Veelken, Constantijn Jm Jm Halkes, J H Frederik Falkenburg, Marieke Griffioen
Expanding the repertoire reveals recurrent, cryptic and hematopoietic HLA class I minor histocompatibility antigens. Blood (2024)
Tooba Abbassi-Daloii, Salma El Abdellaoui, Lennard M Voortman, Thom T J Veeger, Davy Cats, Hailiang Mei, Duncan Edward Meuffels, Ewoud van Arkel, Peter A C 't Hoen, Hermien E Kan, Vered Raz
A transcriptome atlas of leg muscles from healthy human volunteers reveals molecular and cellular signatures associated with muscle location. eLife 12 (2023)
Casper de Visser, Lennart F Johansson, Purva Kulkarni, Hailiang Mei, Pieter Neerincx, K Joeri van der Velde, Péter Horvatovich, Alain J van Gool, Morris A Swertz, Peter A C 't Hoen, Anna Niehues
Ten quick tips for building FAIR workflows. PLoS computational biology 19 (9) (2023)
Tooba Abbassi-Daloii, Salma El Abdellaoui, Lennard M Voortman, Thom T J Veeger, Davy Cats, Hailiang Mei, Duncan Edward Meuffels, Ewoud van Arkel, Peter A C 't Hoen, Hermien E Kan, Vered Raz
A transcriptome atlas of leg muscles from healthy human volunteers reveals molecular and cellular signatures associated with muscle location. eLife 12 (2023)
K Joeri Van der Velde, Gurnoor Singh, Rajaram Kaliyaperumal, XiaoFeng Liao, Sander de Ridder, Susanne Rebers, Hindrik H D Kerstens, Fernanda de Andrade, Jeroen van Reeuwijk, Fini E De Gruyter, Saskia Hiltemann, Maarten Ligtvoet, Marjan M Weiss, Hanneke W M van Deutekom, Anne M L Jansen, Andrew P Stubbs, Lisenka E L M Vissers, Jeroen F J Laros, Esther van Enckevort, Daphne Stemkens, Peter A C 't Hoen, Jeroen A M Beliën, Mariëlle E van Gijn, Morris A Swertz
FAIR Genomes metadata schema promoting Next Generation Sequencing data reuse in Dutch healthcare and research. Scientific data 9 (1) (2022)
Max J F Degener, Remco T P van Cruchten, Brittney A Otero, Eric T Wang, Derick G Wansink, Peter A C 't Hoen
A comprehensive atlas of fetal splicing patterns in the brain of adult myotonic dystrophy type 1 patients. NAR genomics and bioinformatics 4 (1) (2022)
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, Gert Vriend
Entropy and Variability: A Second Opinion by Deep Learning. Biomolecules 12 (12) (2022)
Remco T P van Cruchten, Daniël van As, Jeffrey C Glennon, Baziel G M van Engelen, Peter A C 't Hoen, null null, null null
Clinical improvement of DM1 patients reflected by reversal of disease-induced gene expression in blood. BMC medicine 20 (1) (2022)
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, Gert Vriend
Entropy and Variability: A Second Opinion by Deep Learning. Biomolecules 12 (12) (2022)
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, Gert Vriend
Entropy and Variability: A Second Opinion by Deep Learning. Biomolecules 12 (12) (2022)
Steven Laurie, Davide Piscia, Leslie Matalonga, Alberto Corvó, Marcos Fernandez-Callejo, Carles Garcia-Linares, Carles Hernandez-Ferrer, Cristina Luengo, Inés Martínez, Anastasios Papakonstantinou, Daniel Picó-Amador, Joan Protasio, Rachel Thompson, Raul Tonda, Mònica Bayés, Gemma Bullich, Jordi Camps-Puchadas, Ida Paramonov, Jean-Rémi Trotta, Angel Alonso, Marcella Attimonelli, Christophe Béroud, Virginie Bros-Facer, Orion J Buske, Andrés Cañada-Pallarés, José María Fernandez, Mats G Hansson, Rita Horvath, Julius O B Jacobsen, Rajaram Kaliyaperumal, Séverine Lair-Préterre, Luana Licata, Pedro Lopes, Estrella López-Martín, Deborah Mascalzoni, Lucia Monaco, Luis A Pérez-Jurado, Manuel Posada-de-la-Paz, Jordi Rambla De Argila, Ana Rath, Olaf H Rieß, Peter Nick Robinson, David Salgado, Damian Smedley, J Dylan Spalding, Peter A C 't Hoen, Ana Topf, Irina T Zaharieva, Holm Graessner, Ivo Glynne Gut, Hanns Lochmüller, Sergi Beltran
The RD-Connect Genome-Phenome Analysis Platform: Accelerating diagnosis, research, and gene discovery for rare diseases. Human mutation 43 (6) (2022)
Daniel T Rademaker, Li C Xue, Peter A C 't Hoen, Gert Vriend
Entropy and Variability: A Second Opinion by Deep Learning. Biomolecules 12 (12) (2022)
Tabea V Riepe, Mubeen Khan, Susanne Roosing, Frans P M Cremers, Peter A C 't Hoen
Benchmarking deep learning splice prediction tools using functional splice assays. Human mutation 42 (7) (2021)
Urmo Võsa, Annique A J Claringbould, Harm-Jan Westra, Marc Jan Bonder, Patrick Deelen, Biao Zeng, Holger Kirsten, Ashis Saha, Roman Kreuzhuber, Seyhan Yazar, Harm Brugge, Roy Oelen, Dylan H de Vries, Monique G P van der Wijst, Silva Kasela, Natalia Pervjakova, Isabel Alves, Marie-Julie Favé, Mawussé Agbessi, Mark W Christiansen, Rick Jansen, Ilkka Seppälä, Lin Tong, Alexander Teumer, Katharina Schramm, Gibran Hemani, Joost A M Verlouw, Hanieh Yaghootkar, Reyhan Sönmez Flitman, Andrew Anand Brown, Viktorija Kukushkina, Anette Kalnapenkis, Sina Rueger, Eleonora Porcu, Jaanika Kronberg, Johannes Kettunen, Bernett Lee, Futao Zhang, Ting Qi, Jose Alquicira Hernandez, Wibowo Arindrarto, Frank Beutner, null null, null null, Julia Dmitrieva, Mahmoud Elansary, Benjamin P Fairfax, Michel Georges, Bastiaan T Heijmans, Alex W Hewitt, Mika Kähönen, Yungil Kim, Julian C Knight, Peter Kovacs, Knut Krohn, Shuang Li, Markus Loeffler, Urko M Marigorta, Hailang Mei, Yukihide Momozawa, Martina Müller-Nuraysid, Matthias Nauck, Michel G Nivard, Brenda W J H Penninx, Jonathan K Pritchard, Olli T Raitakari, Olaf Rotzschke, Pieternella Eline Slagboom, Coen D A Stehouwer, Michael Stumvoll, Patrick Sullivan, Peter A C 't Hoen, Joachim Thiery, Anke Tönjes, Jenny Van Dongen, Maarten van Iterson, Jan Herman Veldink, Linus Völker, C A Robert Warmerdam, Cisca Wijmenga, Morris A Swertz, Anand Kumar Andiappan, Grant W Montgomery, Samuli Ripatti, Markus Perola, Zoltan Kutalik, Emmanouil T Dermitzakis, Sven Bergmann, Timothy M Frayling, Joyce van Meurs, Holger Prokisch, Habibul Ahsan, Brandon L Pierce, Terho Lehtimäki, Dorret I Boomsma, Bruce M Psaty, Sina A Gharib, Philip Awadalla, Lili A Milani, Willem Hendrik Ouwehand, Kate Downes, Oliver Stegle, Alexis Battle, Peter M Visscher, Jian Yang, Markus Scholz, Joseph Powell, Greg Gibson, Tõnu Esko, Lude H Franke
Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression. Nature genetics 53 (9) (2021)
Karlijn H J Groenen, Annika Jacobsen, Martijn G Kersloot, Bruna Dos Santos Vieira, Esther J van Enckevort, Rajaram Kaliyaperumal, Derk L Arts, Peter A C 't Hoen, Ronald Cornet, Marco Roos, Leo Schultze Kool
The de novo FAIRification process of a registry for vascular anomalies. Orphanet journal of rare diseases 16 (1) (2021)
Birte Zurek, Kornelia Ellwanger, Lisenka E L M Vissers, Rebecca Schüle, Matthis Synofzik, Ana Töpf, Richarda M de Voer, Steven Laurie, Leslie Matalonga, Christian Gilissen, Stephan Ossowski, Peter A C 't Hoen, Antonio Vitobello, Julia M Schulze-Hentrich, Olaf Riess, Han G Brunner, Anthony J Brookes, Ana Rath, Gisèle Bonne, Gulcin Gumus, Alain Verloes, Nicoline Hoogerbrugge, Teresinha Evangelista, Tina Harmuth, Morris Swertz, J Dylan Spalding, Alexander Hoischen, Sergi Beltran, Holm Graessner, null null
Solve-RD: systematic pan-European data sharing and collaborative analysis to solve rare diseases. European journal of human genetics : EJHG 29 (9) (2021)
Pietro Spitali, Irina Zaharieva, Stefan Bohringer, Monika Hiller, Amina Chaouch, Andreas Roos, Chiara Scotton, Mireille Claustres, Luca Bello, Craig M McDonald, Eric P Hoffman, null null, Zaida Koeks, Eka H E D Suchiman, Sebahattin Cirak, Mariacristina Scoto, Mojgan Reza, Peter A C 't Hoen, Erik H Niks, Sylvie Tuffery-Giraud, Hanns Lochmüller, Alessandra Ferlini, Francesco Muntoni, Annemieke M Aartsma-Rus
TCTEX1D1 is a genetic modifier of disease progression in Duchenne muscular dystrophy. European journal of human genetics : EJHG 28 (6) (2020)
Rachel Thompson, Anastasios Papakonstantinou Ntalis, Sergi Beltran, Ana Töpf, Eduardo de Paula Estephan, Kiran Polavarapu, Peter A C 't Hoen, Paolo Missier, Hanns Lochmüller
Increasing phenotypic annotation improves the diagnostic rate of exome sequencing in a rare neuromuscular disorder. Human mutation 40 (10) (2019)
Gerrit L J Onderwater, Lannie Ligthart, Mariska Bot, Ayse Demirkan, Jingyuan Fu, Carla J H van der Kallen, Lisanne S Vijfhuizen, René Pool, Jun Liu, Floris H M Vanmolkot, Marian Beekman, Ke-Xin Wen, Ivana Nedeljković, Carisha S Thesing, Judith A Pijpers, Dennis A Kies, Ronald Zielman, Irene de Boer, Marleen M J van Greevenbroek, Ilja C W Arts, Yuri Milaneschi, Miranda T Schram, Pieter C Dagnelie, Lude H Franke, Mohammad Arfan Ikram, Michel D Ferrari, Jelle J Goeman, Pieternella Eline Slagboom, Cisca Wijmenga, Coen D A Stehouwer, Dorret I Boomsma, Cornelia M van Duijn, Brenda W J H Penninx, Peter A C 't Hoen, Gisela M Terwindt, Arn M J M van den Maagdenberg, null null
Large-scale plasma metabolome analysis reveals alterations in HDL metabolism in migraine. Neurology 92 (16) (2019)
Klaasjan G Ouwens, Rick Jansen, Michel G Nivard, Jenny van Dongen, Maia J Frieser, Jouke-Jan Hottenga, Wibowo Arindrarto, Annique A J Claringbould, Maarten van Iterson, Hailiang Mei, Lude H Franke, Bastiaan T Heijmans, Peter A C 't Hoen, Joyce van Meurs, Andrew I Brooks, null null, Brenda W J H Penninx, Dorret I Boomsma
A characterization of cis- and trans-heritability of RNA-Seq-based gene expression. European journal of human genetics : EJHG 28 (2) (2019)
Soheil Yousefi, Tooba Abbassi-Daloii, Thirsa Kraaijenbrink, Martijn Vermaat, Hailiang Mei, Peter van 't Hof, Maarten van Iterson, Daria V Zhernakova, Annique Claringbould, Lude Franke, Leen M 't Hart, Roderick C Slieker, Amber van der Heijden, Peter de Knijff, null null, Peter A C 't Hoen
A SNP panel for identification of DNA and RNA specimens. BMC genomics 19 (1) (2018)
Kat S Moore, Nurcan Yagci, Floris van Alphen, Nahuel A Paolini, Rastislav Horos, Ntsiki M Held, Riekelt H Houtkooper, Emile van den Akker, Alexander B Meijer, Peter A C 't Hoen, Marieke von Lindern
Csde1 binds transcripts involved in protein homeostasis and controls their expression in an erythroid cell line. Scientific reports 8 (1) (2018)
René Luijk, Koen F Dekkers, Maarten van Iterson, Wibowo Arindrarto, Annique Claringbould, Paul Hop, Dorret I Boomsma, Cornelia M van Duijn, Marleen M J van Greevenbroek, Jan H Veldink, Cisca Wijmenga, Lude H Franke, Peter A C 't Hoen, Rick Jansen, Joyce van Meurs, Hailiang Mei, P Eline Slagboom, Bastiaan T Heijmans, Erik W van Zwet, null null
Genome-wide identification of directed gene networks using large-scale population genomics data. Nature communications 9 (1) (2018)
René Luijk, Haoyu Wu, Cavin K Ward-Caviness, Eilis Hannon, Elena Carnero-Montoro, Josine L Min, Pooja Mandaviya, Martina Müller-Nuraysid, Hailiang Mei, Silvere M van der Maarel, null null, Caroline Relton, Jonathan Mill, Melanie Waldenberger, Jordana T Bell, Rick Jansen, Alexandra Zhernakova, Lude H Franke, Peter A C 't Hoen, Dorret I Boomsma, Cornelia M van Duijn, Marleen M J van Greevenbroek, Jan H Veldink, Cisca Wijmenga, Joyce van Meurs, Lucia Daxinger, P Eline Slagboom, Erik W van Zwet, Bastiaan T Heijmans
Autosomal genetic variation is associated with DNA methylation in regions variably escaping X-chromosome inactivation. Nature communications 9 (1) (2018)
Ekaterina Shvetsova, Alina Sofronova, Ramin Monajemi, Kristina Gagalova, Harmen H M Draisma, Stefan J White, Gijs W E Santen, Susana M Chuva de Sousa Lopes, Bastiaan T Heijmans, Joyce van Meurs, Rick Jansen, Lude H Franke, Szymon M Kiełbasa, Johan T den Dunnen, Peter A C 't Hoen, null null, null null
Skewed X-inactivation is common in the general female population. European journal of human genetics : EJHG 27 (3) (2018)
A Lourbakos, N Yau, P de Bruijn, M Hiller, K Kozaczynska, R Jean-Baptiste, M Reza, R Wolterbeek, Z Koeks, B Ayoglu, D de Klerk, G Campion, I Zaharieva, V D Nadarajah, P Nilsson, C Al-Khalili Szigyarto, F Muntoni, H Lochmüller, Jan J G M Verschuuren, N Goemans, M Tulinius, E H Niks, S de Kimpe, A Aartsma-Rus, Peter A C 't Hoen, Pietro Spitali
Evaluation of serum MMP-9 as predictive biomarker for antisense therapy in Duchenne. Scientific reports 7 (1) (2017)
Mark D Wilkinson, Michel Dumontier, I Jsbrand Jan Aalbersberg, Gabrielle Appleton, Myles Axton, Arie Baak, Niklas Blomberg, Jan-Willem Boiten, Luiz Bonino da Silva Santos, Philip E Bourne, Jildau Bouwman, Anthony J Brookes, Timothy W Clark, Mercѐ Crosas, Ingrid Dillo, Olivier Dumon, Scott C Edmunds, Chris T A Evelo, Richard Finkers, Alejandra N Gonzalez-Beltran, Alasdair J G Gray, Paul Groth, Carole Goble, Jeffery S Grethe, Zhisheng Huang, Peter A C 't Hoen, Rob W W Hooft, Tobias Kuhn, Ruben Kok, Joost Kok, Scott J Lusher, Maryann E Martone, Albert Mons, Abel L Packer, Bengt Persson, Philippe Rocca-Serra, Marco Roos, Rene van Schaik, Susanna-Assunta Sansone, Erik Schultes, Thierry Sengstag, Ted Slater, George Strawn, Morris A Swertz, Mark Thompson, Johan van der Lei, Erik M van Mulligen, Jan Velterop, Andra Waagmeester, Peter Wittenburg, Katherine J Wolstencroft, Jun Zhao, Barend Mons
The FAIR Guiding Principles for scientific data management and stewardship. Scientific data 3 (2016)

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Publication Activity (10 Years)

Top Topics

Top Venues

Peter A C 't Hoen