Qiong Shi

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 46

Top Venues

Marine drugs

Scientific data

Animals : an open access journal from MDPI

Molecules (Basel, Switzerland)

China Marine

Sun Yat-Sen University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

China Marine Oct 01 2018

China

Chief Scientist :: Academy of Marine Sceinces

Dalian Ocean University

China

Visiting Professor :: College of Fisheries and Life Science

Sun Yat-Sen University Sep 15 2016

China

Distinguished Research Fellow :: School of Life Sciences

BGI Jun 17 2016

China

Chief Scientist :: BGI Research Center for Aquatic Genomics, Chinese Academy of Fishery Sciences

BGI

China

Dean :: BGI Academy of Marine Sciences

Shenzhen University Oct 15 2015

China

Visiting Professor :: College of Life Sciences and Oceanography

BGI Jan 01 2015

China

Chief :: Guangdong Provincial Key Lab of Molecular Breeding in Marine Economic Animals

BGI Sep 12 2012

China

VP & Chief Scientist :: BGI Fisheries

BGI Jun 15 2012

China

Professor & PhD Supervisor :: BGI Education Center, University of Chinese Academy of Sciences

BGI Nov 01 2011

China

Chief :: Shenzhen Key Lab of Marine Genomics

BGI May 05 2011

China

Director, Senior Investigator :: Platform for Marine Research

OriGene Technologies Inc Jan 17 2008 - Apr 29 2011

United States

Scientist :: R & D

University of Maryland Biotechnology Institute Jun 06 2007 - Jan 15 2008

United States

Research Associate :: COMB

National Institutes of Health Apr 22 2002 - Apr 22 2007

United States

Visiting Fellow :: NICHD

Hokkaido University Nov 15 1999 - Dec 31 2001

Japan

JSPS Postdoctoral Research Fellow :: Faculty of Science

Beijing Normal University Aug 15 1997 - Oct 15 1999

China

Postdoc & Associate Professor :: School of Life Sciences

Education History

Sun Yat-Sen University Sep 01 1994 - Jul 01 1997

China

PHD :: School of Life Sciences

Sun Yat-Sen University Sep 01 1991 - Jul 01 1994

China

MSC :: School of Life Sciences

Hubei University Sep 01 1987 - Jul 01 1991

China

BSC :: Department of Biology

Publications

Chang Liu, Chao Bian, Qiang Gao, Zijian Gao, Yu Huang, Lingling Wang, Qiong Shi, Linsheng Song
Whole genome sequencing of a novel sea anemone (Actinostola sp.) from a deep-sea hydrothermal vent. Scientific data 11 (1) (2024)
Ming Li, Kailin Mao, Meiling Huang, Yanling Liao, Jinxing Fu, Kun Pan, Qiong Shi, Bingmiao Gao
Venomics Reveals the Venom Complexity of Sea Anemone Heteractis magnifica . Marine drugs 22 (2) (2024)
Zhengyong Wen, Xiuying Wei, Jieming Chen, Yang Li, Bo Zhou, Chuang Zhang, Peng Fu, Panita Prathomya, Rui Li, Yunyun Lv, Yanping Li, Wanhong Zeng, Yu He, Luo Zhou, Junde Fan, Qiong Shi, Xinhui Zhang
Chromosome-level genome assemblies of vulnerable male and female elongate loach (Leptobotia elongata). Scientific data 11 (1) (2024)
Chang Liu, Chao Bian, Qiang Gao, Zijian Gao, Yu Huang, Lingling Wang, Qiong Shi, Linsheng Song
Whole genome sequencing of a novel sea anemone (Actinostola sp.) from a deep-sea hydrothermal vent. Scientific data 11 (1) (2024)
Zhengyong Wen, Xiuying Wei, Jieming Chen, Yang Li, Bo Zhou, Chuang Zhang, Peng Fu, Panita Prathomya, Rui Li, Yunyun Lv, Yanping Li, Wanhong Zeng, Yu He, Luo Zhou, Junde Fan, Qiong Shi, Xinhui Zhang
Chromosome-level genome assemblies of vulnerable male and female elongate loach (Leptobotia elongata). Scientific data 11 (1) (2024)
Ming Li, Kailin Mao, Meiling Huang, Yanling Liao, Jinxing Fu, Kun Pan, Qiong Shi, Bingmiao Gao
Venomics Reveals the Venom Complexity of Sea Anemone Heteractis magnifica . Marine drugs 22 (2) (2024)
Ming Li, Kailin Mao, Meiling Huang, Yanling Liao, Jinxing Fu, Kun Pan, Qiong Shi, Bingmiao Gao
Venomics Reveals the Venom Complexity of Sea Anemone Heteractis magnifica . Marine drugs 22 (2) (2024)
Ming Li, Kailin Mao, Meiling Huang, Yanling Liao, Jinxing Fu, Kun Pan, Qiong Shi, Bingmiao Gao
Venomics Reveals the Venom Complexity of Sea Anemone Heteractis magnifica . Marine drugs 22 (2) (2024)
Chang Liu, Chao Bian, Qiang Gao, Zijian Gao, Yu Huang, Lingling Wang, Qiong Shi, Linsheng Song
Whole genome sequencing of a novel sea anemone (Actinostola sp.) from a deep-sea hydrothermal vent. Scientific data 11 (1) (2024)
Shengtao Guo, Mengsha Zeng, Wenxue Gao, Fan Li, Xiuying Wei, Qiong Shi, Zheng-Yong Wen, Zhaobin Song
Toll-like Receptor 3 in the Hybrid Yellow Catfish ( Pelteobagrus fulvidraco ♀ × P. vachelli ♂ ): Protein Structure, Evolution and Immune Response to Exogenous Aeromonas hydrophila and Poly (I:C) Stimuli. Animals : an open access journal from MDPI 13 (2) (2023)
Pavel V Panteleev, Victoria N Safronova, Shuting Duan, Alexey S Komlev, Ilia A Bolosov, Roman N Kruglikov, Tatiana I Kombarova, Olga V Korobova, Eugenia S Pereskokova, Aleksander I Borzilov, Igor A Dyachenko, Olga V Shamova, Yu Huang, Qiong Shi, Tatiana V Ovchinnikova
Novel BRICHOS-Related Antimicrobial Peptides from the Marine Worm Heteromastus filiformis : Transcriptome Mining, Synthesis, Biological Activities, and Therapeutic Potential. Marine drugs 21 (12) (2023)
Chao Bian, Chenglong Liu, Guiying Zhang, Ming Tao, Danqiong Huang, Chaogang Wang, Sulin Lou, Hui Li, Qiong Shi, Zhangli Hu
A chromosome-level genome assembly for the astaxanthin-producing microalga Haematococcus pluvialis. Scientific data 10 (1) (2023)
Kai Zhang, Yu Huang, Yuxuan Zhang, Rishen Liang, Qingqing Li, Ruihan Li, Xiaomeng Zhao, Chao Bian, Yongnan Chen, Jinhui Wu, Qiong Shi, Li Lin
A chromosome-level reference genome assembly of the Reeve's moray eel (Gymnothorax reevesii). Scientific data 10 (1) (2023)
Pavel V Panteleev, Victoria N Safronova, Shuting Duan, Alexey S Komlev, Ilia A Bolosov, Roman N Kruglikov, Tatiana I Kombarova, Olga V Korobova, Eugenia S Pereskokova, Aleksander I Borzilov, Igor A Dyachenko, Olga V Shamova, Yu Huang, Qiong Shi, Tatiana V Ovchinnikova
Novel BRICHOS-Related Antimicrobial Peptides from the Marine Worm Heteromastus filiformis : Transcriptome Mining, Synthesis, Biological Activities, and Therapeutic Potential. Marine drugs 21 (12) (2023)
Tianle Tang, Yu Huang, Chao Peng, Yanling Liao, Yunyun Lv, Qiong Shi, Bingmiao Gao
A Chromosome-level Genome Assembly of the Reef Stonefish (Synanceia verrucosa) Provides Novel Insights into Stonustoxin (sntx) Genes. Molecular biology and evolution (2023)
Pavel V Panteleev, Victoria N Safronova, Shuting Duan, Alexey S Komlev, Ilia A Bolosov, Roman N Kruglikov, Tatiana I Kombarova, Olga V Korobova, Eugenia S Pereskokova, Aleksander I Borzilov, Igor A Dyachenko, Olga V Shamova, Yu Huang, Qiong Shi, Tatiana V Ovchinnikova
Novel BRICHOS-Related Antimicrobial Peptides from the Marine Worm Heteromastus filiformis : Transcriptome Mining, Synthesis, Biological Activities, and Therapeutic Potential. Marine drugs 21 (12) (2023)
Pavel V Panteleev, Victoria N Safronova, Shuting Duan, Alexey S Komlev, Ilia A Bolosov, Roman N Kruglikov, Tatiana I Kombarova, Olga V Korobova, Eugenia S Pereskokova, Aleksander I Borzilov, Igor A Dyachenko, Olga V Shamova, Yu Huang, Qiong Shi, Tatiana V Ovchinnikova
Novel BRICHOS-Related Antimicrobial Peptides from the Marine Worm Heteromastus filiformis : Transcriptome Mining, Synthesis, Biological Activities, and Therapeutic Potential. Marine drugs 21 (12) (2023)
Shengtao Guo, Mengsha Zeng, Wenxue Gao, Fan Li, Xiuying Wei, Qiong Shi, Zheng-Yong Wen, Zhaobin Song
Toll-like Receptor 3 in the Hybrid Yellow Catfish ( Pelteobagrus fulvidraco ♀ × P. vachelli ♂ ): Protein Structure, Evolution and Immune Response to Exogenous Aeromonas hydrophila and Poly (I:C) Stimuli. Animals : an open access journal from MDPI 13 (2) (2023)
Bingmiao Gao, Yu Huang, Chao Peng, Bo Lin, Yanling Liao, Chao Bian, Jiaan Yang, Qiong Shi
High-Throughput Prediction and Design of Novel Conopeptides for Biomedical Research and Development. Biodesign research 2022 (2022)
Xidong Mu, Yi Liu, Chao Liu, Chen-Xi Zhao, Ruihan Li, Xinxin You, Yexin Yang, Xuejie Wang, Yinchang Hu, Qiong Shi, Chao Bian
Identification of candidate sex-specific genomic regions in male and female Asian arowana genomes. GigaScience 11 (2022)
Yishan Lu, Ruihan Li, Liqun Xia, Jun Cheng, Hongli Xia, Qiuyao Zhan, Dapeng Yu, Xinxin You, Ruobo Gu, Junmin Xu, Qiong Shi, Chao Bian
A chromosome-level genome assembly of the jade perch (Scortum barcoo). Scientific data 9 (1) (2022)
Yinnan Mu, Chao Bian, Ruoyu Liu, Yuguang Wang, Guangming Shao, Jia Li, Ying Qiu, Tianliang He, Wanru Li, Jingqun Ao, Qiong Shi, Xinhua Chen
Whole genome sequencing of a snailfish from the Yap Trench (~7,000 m) clarifies the molecular mechanisms underlying adaptation to the deep sea. PLoS genetics 17 (5) (2021)
Chao Peng, Yu Huang, Chao Bian, Jia Li, Jie Liu, Kai Zhang, Xinxin You, Zhilong Lin, Yanbin He, Jieming Chen, Yunyun Lv, Zhiqiang Ruan, Xinhui Zhang, Yunhai Yi, Yanping Li, Xueqiang Lin, Ruobo Gu, Junmin Xu, Jia'an Yang, Chongxu Fan, Ge Yao, Ji-Sheng Chen, Hui Jiang, Bingmiao Gao, Qiong Shi
The first Conus genome assembly reveals a primary genetic central dogma of conopeptides in C. betulinus. Cell discovery 7 (1) (2021)
Xiao Liu, Chao Li, Min Chen, Bo Liu, Xiaojun Yan, Junhao Ning, Bin Ma, Guilong Liu, Zhaoshan Zhong, Yanglei Jia, Qiong Shi, Chunde Wang
Draft genomes of two Atlantic bay scallop subspecies Argopecten irradians irradians and A. i. concentricus. Scientific data 7 (1) (2020)
Chengfei Sun, Jia Li, Junjian Dong, Yongchao Niu, Jie Hu, Jinmin Lian, Wuhui Li, Jiang Li, Yuanyuan Tian, Qiong Shi, Xing Ye
Chromosome-level genome assembly for the largemouth bass Micropterus salmoides provides insights into adaptation to fresh and brackish water. Molecular ecology resources 21 (1) (2020)
Yuting Huang, Chao Bian, Zhaoqun Liu, Lingling Wang, Changhu Xue, Hongliang Huang, Yunhai Yi, Xinxin You, Wei Song, Xiang-Zhao Mao, Linsheng Song, Qiong Shi
The First Genome Survey of the Antarctic Krill (Euphausia superba) Provides a Valuable Genetic Resource for Polar Biomedical Research. Marine drugs 18 (4) (2020)
Chao Bian, Weiting Chen, Zhiqiang Ruan, Zhe Hu, Yu Huang, Yunyun Lv, Tengfei Xu, Jia Li, Qiong Shi, Wei Ge
Genome and Transcriptome Sequencing of casper and roy Zebrafish Mutants Provides Novel Genetic Clues for Iridophore Loss. International journal of molecular sciences 21 (7) (2020)
Kuntong Jia, Chao Bian, Yunhai Yi, Yanping Li, Peng Jia, Duan Gui, Xiyang Zhang, Wenzhi Lin, Xian Sun, Yunyun Lv, Jia Li, Xinxin You, Qiong Shi, Meisheng Yi, Yuping Wu
Whole Genome Sequencing of Chinese White Dolphin (Sousa chinensis) for High-Throughput Screening of Antihypertensive Peptides. Marine drugs 17 (9) (2019)
Pengfan Zhang, Tao Jin, Sunil Kumar Sahu, Jin Xu, Qiong Shi, Huan Liu, Yayu Wang
The Distribution of Tryptophan-Dependent Indole-3-Acetic Acid Synthesis Pathways in Bacteria Unraveled by Large-Scale Genomic Analysis. Molecules (Basel, Switzerland) 24 (7) (2019)
Junmin Xu, Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Gerry Amor Camer, Hiroki Teraoka, Qiong Shi
Molecular Evolution of Tryptophan Hydroxylases in Vertebrates: A Comparative Genomic Survey. Genes 10 (3) (2019)
Weiwei Chen, Chao Bian, Xinxin You, Jia Li, Lizhen Ye, Zhengyong Wen, Yunyun Lv, Xinhui Zhang, Junmin Xu, Shaosen Yang, Ruobo Gu, Xueqiang Lin, Qiong Shi
Genome Sequencing of the Japanese Eel (Anguilla japonica) for Comparative Genomic Studies on tbx4 and a tbx4 Gene Cluster in Teleost Fishes. Marine drugs 17 (7) (2019)
Dengdong Wang, Xiyang Chen, Xinhui Zhang, Jia Li, Yunhai Yi, Chao Bian, Qiong Shi, Haoran Lin, Shuisheng Li, Yong Zhang, Xinxin You
Whole Genome Sequencing of the Giant Grouper (Epinephelus lanceolatus) and High-Throughput Screening of Putative Antimicrobial Peptide Genes. Marine drugs 17 (9) (2019)
Chao Bian, Jia Li, Xueqiang Lin, Xiyang Chen, Yunhai Yi, Xinxin You, Yiping Zhang, Yunyun Lv, Qiong Shi
Whole Genome Sequencing of the Blue Tilapia (Oreochromis aureus) Provides a Valuable Genetic Resource for Biomedical Research on Tilapias. Marine drugs 17 (7) (2019)
Xinhui Zhang, Huiwei Huang, Yanbin He, Zhiqiang Ruan, Xinxin You, Wanshun Li, Bo Wen, Zizheng Lu, Bing Liu, Xu Deng, Qiong Shi
High-throughput identification of heavy metal binding proteins from the byssus of chinese green mussel (Perna viridis) by combination of transcriptome and proteome sequencing. PloS one 14 (5) (2019)
Yunhai Yi, Lifeng Liang, Zhilin Wang, Peng Ai, Xinxin You, Chao Bian, Qiong Shi, Bo Dong
A Comparative Metagenomics Study on Gastrointestinal Microbiota in Amphibious Mudskippers and Other Vertebrate Animals. Animals : an open access journal from MDPI 9 (9) (2019)
Wan-Sheng Jiang, Yicheng Guo, Kunfeng Yang, Qiong Shi, Junxing Yang
Insights into Body Size Evolution: A Comparative Transcriptome Study on Three Species of Asian Sisoridae Catfish. International journal of molecular sciences 20 (4) (2019)
Ge Yao, Chao Peng, Yabing Zhu, Chongxu Fan, Hui Jiang, Jisheng Chen, Ying Cao, Qiong Shi
High-Throughput Identification and Analysis of Novel Conotoxins from Three Vermivorous Cone Snails by Transcriptome Sequencing. Marine drugs 17 (3) (2019)
Xiyang Chen, Yunhai Yi, Xinxin You, Jie Liu, Qiong Shi
High-Throughput Identification of Putative Antimicrobial Peptides from Multi-Omics Data of the Lined Seahorse (Hippocampus erectus). Marine drugs 18 (1) (2019)
Filipe Silva, Yu Huang, Vítor Yang, Xidong Mu, Qiong Shi, Agostinho Antunes
Transcriptomic Characterization of the South American Freshwater Stingray Potamotrygon motoro Venom Apparatus. Toxins 10 (12) (2018)
Lily C Hughes, Guillermo Ortí, Yu Huang, Ying Sun, Carole C Baldwin, Andrew W Thompson, Dahiana Arcila, Ricardo Betancur-R, Chenhong Li, Leandro A Becker, Nicolas Bellora, Xiaomeng Zhao, Xiaofeng Li, Min Wang, Chao Fang, Bing Xie, Zhuocheng Zhou, Hai Huang, Songlin Chen, Byrappa Venkatesh, Qiong Shi
Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data. Proceedings of the National Academy of Sciences of the United States of America 115 (24) (2018)
Yanping Li, Yunyun Lv, Chao Bian, Xinxin You, Li Deng, Qiong Shi
A Comparative Genomic Survey Provides Novel Insights into Molecular Evolution of l-Aromatic Amino Acid Decarboxylase in Vertebrates. Molecules (Basel, Switzerland) 23 (4) (2018)
Shiyong Zhang, Jia Li, Qin Qin, Wei Liu, Chao Bian, Yunhai Yi, Minghua Wang, Liqiang Zhong, Xinxin You, Shengkai Tang, Yanshan Liu, Yu Huang, Ruobo Gu, Junmin Xu, Wenji Bian, Qiong Shi, Xiaohui Chen
Whole-Genome Sequencing of Chinese Yellow Catfish Provides a Valuable Genetic Resource for High-Throughput Identification of Toxin Genes. Toxins 10 (12) (2018)
Yunhai Yi, Yunyun Lv, Lijun Zhang, Jian Yang, Qiong Shi
High Throughput Identification of Antihypertensive Peptides from Fish Proteome Datasets. Marine drugs 16 (10) (2018)
Yunyun Lv, Yanping Li, Yunhai Yi, Lijun Zhang, Qiong Shi, Jian Yang
A Genomic Survey of Angiotensin-Converting Enzymes Provides Novel Insights into Their Molecular Evolution in Vertebrates. Molecules (Basel, Switzerland) 23 (11) (2018)
Yunyun Lv, Yanping Li, Zhiqiang Ruan, Chao Bian, Xinxin You, Junxing Yang, Wansheng Jiang, Qiong Shi
The Complete Mitochondrial Genome of Glyptothorax macromaculatus Provides a Well-Resolved Molecular Phylogeny of the Chinese Sisorid Catfishes. Genes 9 (6) (2018)
Bingmiao Gao, Chao Peng, Yabing Zhu, Yuhui Sun, Tian Zhao, Yu Huang, Qiong Shi
High Throughput Identification of Novel Conotoxins from the Vermivorous Oak Cone Snail (Conus quercinus) by Transcriptome Sequencing. International journal of molecular sciences 19 (12) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Qiong Shi