Raphael Eisenhofer

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 20

Top Venues

PeerJ

Microbiology spectrum

The New phytologist

ISME communications

University of Adelaide

Victoria University of Wellington (BSC)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Adelaide

Australia

ARC Research Associate :: Australian Centre for Ancient DNA

Education History

Victoria University of Wellington

New Zealand

BSC

Publications

Raphael Eisenhofer, Joseph Nesme, Luisa Santos-Bay, Adam Koziol, Søren Johannes Sørensen, Antton Alberdi, Ostaizka Aizpurua
A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics. Microbiology spectrum (2024)
Brady L Welsh, Raphael Eisenhofer
The prevalence of controls in phyllosphere microbiome research: a methodological review. The New phytologist 242 (1) (2024)
Raphael Eisenhofer, Joseph Nesme, Luisa Santos-Bay, Adam Koziol, Søren Johannes Sørensen, Antton Alberdi, Ostaizka Aizpurua
A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics. Microbiology spectrum 12 (4) (2024)
Raphael Eisenhofer, Joseph Nesme, Luisa Santos-Bay, Adam Koziol, Søren Johannes Sørensen, Antton Alberdi, Ostaizka Aizpurua
A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics. Microbiology spectrum 12 (4) (2024)
Brady L Welsh, Raphael Eisenhofer
The prevalence of controls in phyllosphere microbiome research: a methodological review. The New phytologist 242 (1) (2024)
Brady L Welsh, Raphael Eisenhofer
The prevalence of controls in phyllosphere microbiome research: a methodological review. The New phytologist (2024)
Raphael Eisenhofer, Sterling Wright, Laura Weyrich
Benchmarking a targeted 16S ribosomal RNA gene enrichment approach to reconstruct ancient microbial communities. PeerJ 12 (2024)
Raphael Eisenhofer, Sterling Wright, Laura Weyrich
Benchmarking a targeted 16S ribosomal RNA gene enrichment approach to reconstruct ancient microbial communities. PeerJ 12 (2024)
Raphael Eisenhofer, Joseph Nesme, Luisa Santos-Bay, Adam Koziol, Søren Johannes Sørensen, Antton Alberdi, Ostaizka Aizpurua
A comparison of short-read, HiFi long-read, and hybrid strategies for genome-resolved metagenomics. Microbiology spectrum 12 (4) (2024)
Raphael Eisenhofer, Kylie L Brice, Michaela Dj Blyton, Scott E Bevins, Kellie Leigh, Brajesh K Singh, Kristofer M Helgen, Ian Hough, Christopher B Daniels, Natasha Speight, Ben D Moore
Individuality and stability of the koala ( Phascolarctos cinereus ) faecal microbiota through time. PeerJ 11 (2023)
Raphael Eisenhofer, Kylie L Brice, Michaela Dj Blyton, Scott E Bevins, Kellie Leigh, Brajesh K Singh, Kristofer M Helgen, Ian Hough, Christopher B Daniels, Natasha Speight, Ben D Moore
Individuality and stability of the koala ( Phascolarctos cinereus ) faecal microbiota through time. PeerJ 11 (2023)
Raphael Eisenhofer, Kristofer M Helgen, David Taggart
Signatures of landscape and captivity in the gut microbiota of Southern Hairy-nosed Wombats (Lasiorhinus latifrons). Animal microbiome 3 (1) (2021)
Linda Armbrecht, Raphael Eisenhofer, José Utge, Elizabeth C Sibert, Fabio Rocha Jimenez Vieira, Ryan Ward, Juan J Pierella Karlusich, Leila Tirichine, Richard D Norris, Mindi Summers, Chris Bowler
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics. ISME communications 1 (1) (2021)
Linda Armbrecht, Raphael Eisenhofer, José Utge, Elizabeth C Sibert, Fabio Rocha Jimenez Vieira, Ryan Ward, Juan J Pierella Karlusich, Leila Tirichine, Richard D Norris, Mindi Summers, Chris Bowler
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics. ISME communications 1 (1) (2021)
Sesilje Weiss, David Taggart, Ian Smith, Kristofer M Helgen, Raphael Eisenhofer
Host reproductive cycle influences the pouch microbiota of wild southern hairy-nosed wombats (Lasiorhinus latifrons). Animal microbiome 3 (1) (2021)
Linda Armbrecht, Salvador Herrando-Pérez, Raphael Eisenhofer, Gustaaf M Hallegraeff, Christopher J S Bolch, Alan Cooper
An optimized method for the extraction of ancient eukaryote DNA from marine sediments. Molecular ecology resources 20 (4) (2020)
Raphael Eisenhofer, Laura Susan Weyrich
Assessing alignment-based taxonomic classification of ancient microbial DNA. PeerJ 7 (2019)
Raphael Eisenhofer, Alan Cooper
A new home for microbes. eLife 8 (2019)
Raphael Eisenhofer, Laura S Weyrich
Proper Authentication of Ancient DNA Is Still Essential. Genes 9 (3) (2018)
Raphael Eisenhofer, Alan Cooper, Laura S Weyrich
Isolating Viable Ancient Bacteria: What You Put In Is What You Get Out. Genome announcements 4 (4) (2016)

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Publication Activity (10 Years)

Top Topics

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Raphael Eisenhofer