Chris Bowler

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 70

Top Venues

Nature communications

The ISME journal

Communications biology

ISME communications

CNRS Délégation Paris B

This page only lists publications with an associated author ORCID identifier.

Affiliation History

CNRS Délégation Paris B Nov 01 2002

France

Director of research :: Institut de Biologie de l'Ecole Normale Superieure

Publications

Charlotte Nef, Juan J Pierella Karlusich, Chris Bowler
From nets to networks: tools for deciphering phytoplankton metabolic interactions within communities and their global significance. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Hao Zhang, Xin Wang, Meng Qu, Haiyan Yu, Jianping Yin, Xiaochuan Liu, Yuhong Liu, Bo Zhang, Yanhong Zhang, Zhangliang Wei, Fangfang Yang, Jingtian Wang, Chengcheng Shi, Guangyi Fan, Jun Sun, Lijuan Long, David A Hutchins, Chris Bowler, Senjie Lin, Da-Zhi Wang, Qiang Lin
Genome of Halimeda opuntia reveals differentiation of subgenomes and molecular bases of multinucleation and calcification in algae. Proceedings of the National Academy of Sciences of the United States of America 121 (39) (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Anna M G Novák Vanclová, Charlotte Nef, Zoltan Fussy, Adél Vancl, Fuhai Liu, Chris Bowler, Richard G Dorrell
New plastids, old proteins: repeated endosymbiotic acquisitions in kareniacean dinoflagellates. EMBO reports (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Nils Giordano, Marinna Gaudin, Camille Trottier, Erwan Delage, Charlotte Nef, Chris Bowler, Samuel Chaffron
Genome-scale community modelling reveals conserved metabolic cross-feedings in epipelagic bacterioplankton communities. Nature communications 15 (1) (2024)
Charlotte Nef, Juan J Pierella Karlusich, Chris Bowler
From nets to networks: tools for deciphering phytoplankton metabolic interactions within communities and their global significance. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Anna M G Novák Vanclová, Charlotte Nef, Zoltan Fussy, Adél Vancl, Fuhai Liu, Chris Bowler, Richard G Dorrell
New plastids, old proteins: repeated endosymbiotic acquisitions in kareniacean dinoflagellates. EMBO reports 25 (4) (2024)
Anna M G Novák Vanclová, Charlotte Nef, Zoltan Fussy, Adél Vancl, Fuhai Liu, Chris Bowler, Richard G Dorrell
New plastids, old proteins: repeated endosymbiotic acquisitions in kareniacean dinoflagellates. EMBO reports 25 (4) (2024)
Charlotte Nef, Juan J Pierella Karlusich, Chris Bowler
From nets to networks: tools for deciphering phytoplankton metabolic interactions within communities and their global significance. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 379 (1909) (2024)
Richard G Dorrell, Youjun Zhang, Yue Liang, Nolwenn Gueguen, Tomomi Nonoyama, Dany Croteau, Mathias Penot, Sandrine Adiba, Benjamin Bailleul, Valérie Gros, Juan J Pierella Karlusich, Nathanaël Zweig, Alisdair Robert Fernie, Juliette Jouhet, Eric Maréchal, Chris Bowler
Complementary environmental analysis and functional characterization of lower glycolysis-gluconeogenesis in the diatom plastid. The Plant cell (2024)
Anna M G Novák Vanclová, Charlotte Nef, Zoltan Fussy, Adél Vancl, Fuhai Liu, Chris Bowler, Richard G Dorrell
New plastids, old proteins: repeated endosymbiotic acquisitions in kareniacean dinoflagellates. EMBO reports 25 (4) (2024)
Anna M G Novák Vanclová, Charlotte Nef, Zoltan Fussy, Adél Vancl, Fuhai Liu, Chris Bowler, Richard G Dorrell
New plastids, old proteins: repeated endosymbiotic acquisitions in kareniacean dinoflagellates. EMBO reports 25 (4) (2024)
Alice Rouan, Melanie Pousse, Nadir Djerbi, Barbara Porro, Guillaume Bourdin, Quentin Carradec, Benjamin Cc Hume, Julie Poulain, Julie Lê-Hoang, Eric Armstrong, Sylvain Agostini, Guillem Salazar, Hans-Joachim Ruscheweyh, Jean-Marc Aury, David A Paz-García, Ryan McMinds, Marie-Josèphe Giraud-Panis, Romane Deshuraud, Alexandre Ottaviani, Lycia Die Morini, Camille Leone, Lia Wurzer, Jessica Tran, Didier Zoccola, Alexis Pey, Clémentine Moulin, Emilie Boissin, Guillaume Iwankow, Sarah Romac, Colomban de Vargas, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Eric Douville, J Michel Flores, Stéphanie Reynaud, Olivier P Thomas, Romain Troublé, Rebecca Vega Thurber, Serge Planes, Denis Allemand, Stephane Pesant, Pierre E Galand, Patrick Wincker, Shinichi Sunagawa, Eric Röttinger, Paola Furla, Christian R Voolstra, Didier Forcioli, Fabien Lombard, Eric Gilson
Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals. Nature communications 14 (1) (2023)
Caroline Belser, Julie Poulain, Karine Labadie, Frederick Gavory, Adriana Alberti, Julie Guy, Quentin Carradec, Corinne Cruaud, Corinne Da Silva, Stefan Engelen, Paul Mielle, Aude Perdereau, Gaelle Samson, Shahinaz Gas, null null, Christian R Voolstra, Pierre E Galand, J Michel Flores, Benjamin C C Hume, Gabriela Perna, Maren Ziegler, Hans-Joachim Ruscheweyh, Emilie Boissin, Sarah Romac, Guillaume Bourdin, Guillaume Iwankow, Clémentine Moulin, David A Paz García, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, Didier Forcioli, Paola Furla, Eric Gilson, Fabien Lombard, Stéphanie Reynaud, Stéphanie Reynaud, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Rebecca Vega Thurber, Didier Zoccola, Claude Scarpelli, E' Krame Jacoby, Pedro H Oliveira, Jean-Marc Aury, Denis Allemand, Serge Planes, Patrick Wincker
Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition. Scientific data 10 (1) (2023)
Corentin Hochart, Lucas Paoli, Hans-Joachim Ruscheweyh, Guillem Salazar, Emilie Boissin, Sarah Romac, Julie Poulain, Guillaume Bourdin, Guillaume Iwankow, Clémentine Moulin, Maren Ziegler, Barbara Porro, Eric J Armstrong, Benjamin C C Hume, Jean-Marc Aury, Claudia Pogoreutz, David A Paz-García, Maggy M Nugues, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Olivier P Thomas, Romain Troublé, Patrick Wincker, Didier Zoccola, Denis Allemand, Serge Planes, Rebecca L Vega Thurber, Christian R Voolstra, Shinichi Sunagawa, Pierre E Galand
Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean. Nature communications 14 (1) (2023)
Antoine Hoguin, Feng Yang, Agnès Groisillier, Chris Bowler, Auguste Genovesio, Ouardia Ait-Mohamed, Fabio Rocha Jimenez Vieira, Leila Tirichine
The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases. Communications biology 6 (1) (2023)
Janaina Rigonato, Marko Budinich, Alejandro A Murillo, Manoela C Brandão, Juan J Pierella Karlusich, Yawouvi Dodji Soviadan, Ann C Gregory, Hisashi Endo, Florian Kokoszka, Dean Vik, Nicolas Henry, Paul Frémont, Karine Labadie, Ahmed A Zayed, Céline Dimier, Marc Picheral, Sarah Searson, Julie Poulain, Stefanie Kandels, Stéphane Pesant, Eric Karsenti, null null, Peer Bork, Chris Bowler, Colomban de Vargas, Damien Eveillard, Marion Gehlen, Daniele Iudicone, Fabien Lombard, Hiroyuki Ogata, Lars Stemmann, Matthew B Sullivan, Shinichi Sunagawa, Patrick Wincker, Samuel Chaffron, Olivier Jaillon
Ocean-wide comparisons of mesopelagic planktonic community structures. ISME communications 3 (1) (2023)
Keisuke Inomura, Juan J Pierella Karlusich, Stephanie Dutkiewicz, Curtis Deutsch, Paul J Harrison, Chris Bowler
High Growth Rate of Diatoms Explained by Reduced Carbon Requirement and Low Energy Cost of Silica Deposition. Microbiology spectrum (2023)
Fabien Lombard, Guillaume Bourdin, Stéphane Pesant, Sylvain Agostini, Alberto Baudena, Emilie Boissin, Nicolas Cassar, Megan Clampitt, Pascal Conan, Ophélie Da Silva, Céline Dimier, Eric Douville, Amanda Elineau, Jonathan Fin, J Michel Flores, Jean François Ghiglione, Benjamin C C Hume, Laetitia Jalabert, Seth G John, Rachel L Kelly, Ilan Koren, Yajuan Lin, Dominique Marie, Ryan McMinds, Zoé Mériguet, Nicolas Metzl, David A Paz García, Maria Luiza Pedrotti, Julie Poulain, Mireille Pujo-Pay, Joséphine Ras, Gilles Reverdin, Sarah Romac, Alice Rouan, Eric Röttinger, Assaf Vardi, Christian R Voolstra, Clémentine Moulin, Guillaume Iwankow, Bernard Banaigs, Chris Bowler, Colomban de Vargas, Didier Forcioli, Paola Furla, Pierre E Galand, Eric Gilson, Stéphanie Reynaud, Shinichi Sunagawa, Matthew B Sullivan, Olivier P Thomas, Romain Troublé, Rebecca Vega Thurber, Patrick Wincker, Didier Zoccola, Denis Allemand, Serge Planes, Emmanuel S Boss, Gaby Gorsky
Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems. Scientific data 10 (1) (2023)
Pierre E Galand, Hans-Joachim Ruscheweyh, Guillem Salazar, Corentin Hochart, Nicolas Henry, Benjamin C C Hume, Pedro H Oliveira, Aude Perdereau, Karine Labadie, Caroline Belser, Emilie Boissin, Sarah Romac, Julie Poulain, Guillaume Bourdin, Guillaume Iwankow, Clémentine Moulin, Eric J Armstrong, David A Paz-García, Maren Ziegler, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Olivier P Thomas, Romain Troublé, Didier Zoccola, Christian R Voolstra, Rebecca L Vega Thurber, Shinichi Sunagawa, Patrick Wincker, Denis Allemand, Serge Planes
Diversity of the Pacific Ocean coral reef microbiome. Nature communications 14 (1) (2023)
Antoine Hoguin, Feng Yang, Agnès Groisillier, Chris Bowler, Auguste Genovesio, Ouardia Ait-Mohamed, Fabio Rocha Jimenez Vieira, Leila Tirichine
The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases. Communications biology 6 (1) (2023)
Zhanru Shao, Osei Ampomah, Fabio Rocha Jimenez Vieira, Richard G Dorrell, Shaoxuan Li, Leila Tirichine, Vincent Bulone, Delin Duan, Chris Bowler
Characterization of a Marine Diatom Chitin Synthase Using a Combination of Meta-Omics, Genomics, and Heterologous Expression Approaches. mSystems (2023)
Antoine Hoguin, Feng Yang, Agnès Groisillier, Chris Bowler, Auguste Genovesio, Ouardia Ait-Mohamed, Fabio Rocha Jimenez Vieira, Leila Tirichine
The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases. Communications biology 6 (1) (2023)
Dong Xu, Guanchao Zheng, Georgina Brennan, Zhuonan Wang, Tao Jiang, Ke Sun, Xiao Fan, Chris Bowler, Xiaowen Zhang, Yan Zhang, Wei Wang, Yitao Wang, Yan Li, Haiyan Wu, Youxun Li, Fei-Xue Fu, David A Hutchins, Zhijun Tan, Naihao Ye
Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification. The ISME journal 17 (4) (2023)
Eric J Armstrong, Julie Lê-Hoang, Quentin Carradec, Jean-Marc Aury, Benjamin Noel, Benjamin C C Hume, Christian R Voolstra, Julie Poulain, Caroline Belser, David A Paz García, Corinne Cruaud, Karine Labadie, Corinne Da Silva, Clémentine Moulin, Emilie Boissin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Matthew B Sullivan, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Rebecca L Vega Thurber, Didier Zoccola, Serge Planes, Denis Allemand, Patrick Wincker
Host transcriptomic plasticity and photosymbiotic fidelity underpin Pocillopora acclimatization across thermal regimes in the Pacific Ocean. Nature communications 14 (1) (2023)
Antoine Hoguin, Feng Yang, Agnès Groisillier, Chris Bowler, Auguste Genovesio, Ouardia Ait-Mohamed, Fabio Rocha Jimenez Vieira, Leila Tirichine
The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases. Communications biology 6 (1) (2023)
Nathalie Joli, Lorenzo Concia, Karel Mocaer, Julie Guterman, Juliette Laude, Sébastien Guérin, Théo Sciandra, Flavienne Bruyant, Ouardia Ait-Mohamed, Marine Beguin, Marie-Helene Forget, Clara Bourbousse, Thomas Lacour, Benjamin Bailleul, Charlotte Nef, Mireille Savoie, Jean-Eric Tremblay, Douglas A Campbell, Johann Lavaud, Yannick Schwab, Marcel Babin, Chris Bowler
Hypometabolism to survive the long polar night and subsequent successful return to light in the diatom Fragilariopsis cylindrus. The New phytologist (2023)
Dong Xu, Guanchao Zheng, Georgina Brennan, Zhuonan Wang, Tao Jiang, Ke Sun, Xiao Fan, Chris Bowler, Xiaowen Zhang, Yan Zhang, Wei Wang, Yitao Wang, Yan Li, Haiyan Wu, Youxun Li, Fei-Xue Fu, David A Hutchins, Zhijun Tan, Naihao Ye
Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification. The ISME journal (2023)
Dong Xu, Guanchao Zheng, Georgina Brennan, Zhuonan Wang, Tao Jiang, Ke Sun, Xiao Fan, Chris Bowler, Xiaowen Zhang, Yan Zhang, Wei Wang, Yitao Wang, Yan Li, Haiyan Wu, Youxun Li, Fei-Xue Fu, David A Hutchins, Zhijun Tan, Naihao Ye
Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification. The ISME journal (2023)
Alex J Veglia, Kalia S I Bistolas, Christian R Voolstra, Benjamin C C Hume, Hans-Joachim Ruscheweyh, Serge Planes, Denis Allemand, Emilie Boissin, Patrick Wincker, Julie Poulain, Clémentine Moulin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Didier Zoccola, Adrienne M S Correa, Rebecca L Vega Thurber
Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes. Communications biology 6 (1) (2023)
Dong Xu, Guanchao Zheng, Georgina Brennan, Zhuonan Wang, Tao Jiang, Ke Sun, Xiao Fan, Chris Bowler, Xiaowen Zhang, Yan Zhang, Wei Wang, Yitao Wang, Yan Li, Haiyan Wu, Youxun Li, Fei-Xue Fu, David A Hutchins, Zhijun Tan, Naihao Ye
Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification. The ISME journal 17 (4) (2023)
Isabel Sanz-Sáez, Pablo Sánchez, Guillem Salazar, Shinichi Sunagawa, Colomban de Vargas, Chris Bowler, Matthew B Sullivan, Patrick Wincker, Eric Karsenti, Carlos Pedrós-Alió, Susana Agustí, Takashi Gojobori, Carlos M Duarte, Josep M Gasol, Olga Sánchez, Silvia G Acinas
Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation. ISME communications 3 (1) (2023)
Antoine Hoguin, Feng Yang, Agnès Groisillier, Chris Bowler, Auguste Genovesio, Ouardia Ait-Mohamed, Fabio Rocha Jimenez Vieira, Leila Tirichine
The model diatom Phaeodactylum tricornutum provides insights into the diversity and function of microeukaryotic DNA methyltransferases. Communications biology 6 (1) (2023)
Benjamin Noel, France Denoeud, Alice Rouan, Carol Buitrago-López, Laura Capasso, Julie Poulain, Emilie Boissin, Mélanie Pousse, Corinne Da Silva, Arnaud Couloux, Eric J Armstrong, Quentin Carradec, Corinne Cruaud, Karine Labadie, Julie Lê-Hoang, Sylvie Tambutté, Valérie Barbe, Clémentine Moulin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Sylvain Agostini, Bernard Banaigs, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Matthew B Sullivan, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Rebecca L Vega Thurber, Denis Allemand, Serge Planes, Eric Gilson, Didier Zoccola, Patrick Wincker, Christian R Voolstra, Jean-Marc Aury
Pervasive tandem duplications and convergent evolution shape coral genomes. Genome biology 24 (1) (2023)
Dong Xu, Guanchao Zheng, Georgina Brennan, Zhuonan Wang, Tao Jiang, Ke Sun, Xiao Fan, Chris Bowler, Xiaowen Zhang, Yan Zhang, Wei Wang, Yitao Wang, Yan Li, Haiyan Wu, Youxun Li, Fei-Xue Fu, David A Hutchins, Zhijun Tan, Naihao Ye
Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification. The ISME journal 17 (4) (2023)
Hiroto Kaneko, Hisashi Endo, Nicolas Henry, Cédric Berney, Frédéric Mahé, Julie Poulain, Karine Labadie, Odette Beluche, Roy El Hourany, null null, Samuel Chaffron, Patrick Wincker, Ryosuke Nakamura, Lee Karp-Boss, Emmanuel S Boss, Chris Bowler, Colomban de Vargas, Kentaro Tomii, Hiroyuki Ogata
Predicting global distributions of eukaryotic plankton communities from satellite data. ISME communications 3 (1) (2023)
Antoine Régimbeau, Marko Budinich, Abdelhalim Larhlimi, Juan J Pierella Karlusich, Olivier Aumont, Laurent Memery, Chris Bowler, Damien Eveillard
Contribution of genome-scale metabolic modelling to niche theory. Ecology letters 25 (6) (2022)
Guillermo Dominguez-Huerta, Ahmed A Zayed, James M Wainaina, Jiarong Guo, Funing Tian, Akbar Adjie Pratama, Benjamin Bolduc, Mohamed Mohssen, Olivier Zablocki, Eric Pelletier, Erwan Delage, Adriana Alberti, Jean-Marc Aury, Quentin Carradec, Corinne Da Silva, Karine Labadie, Julie Poulain, null null, Chris Bowler, Damien Eveillard, Lionel Guidi, Eric Karsenti, J Thomas Beatty, Hiroyuki Ogata, Patrick Wincker, Alexander I Culley, Samuel Chaffron, Matthew B Sullivan
Diversity and ecological footprint of Global Ocean RNA viruses. Science (New York, N.Y.) 376 (6598) (2022)
Lucas Paoli, Hans-Joachim Ruscheweyh, Clarissa C Forneris, Florian Hubrich, Satria Kautsar, Agneya Bhushan, Alessandro Lotti, Quentin Clayssen, Guillem Salazar, Alessio Milanese, Charlotte I Carlström, Chrysa Papadopoulou, Daniel Gehrig, Mikhail Karasikov, Harun Mustafa, Martin Larralde, Laura M Carroll, Pablo Sánchez, Ahmed A Zayed, Dylan R Cronin, Silvia G Acinas, Peer Bork, Chris Bowler, Tom O Delmont, Josep M Gasol, Alvar D Gossert, André Kahles, Matthew B Sullivan, Patrick Wincker, Georg Zeller, Serina L Robinson, Jörn Piel, Shinichi Sunagawa
Biosynthetic potential of the global ocean microbiome. Nature 607 (7917) (2022)
Théo Sciandra, Marie-Helene Forget, Flavienne Bruyant, Marine Béguin, Thomas Lacour, Chris Bowler, Marcel Babin
The possible fates of Fragilariopsis cylindrus (polar diatom) cells exposed to prolonged darkness. Journal of phycology 58 (2) (2022)
Juan J Pierella Karlusich, Eric Pelletier, Lucie Zinger, Fabien Lombard, Adriana Zingone, Sébastien Colin, Josep M Gasol, Richard G Dorrell, Nicolas Henry, Eleonora Scalco, Silvia G Acinas, Patrick Wincker, Colomban de Vargas, Chris Bowler
A robust approach to estimate relative phytoplankton cell abundances from metagenomes. Molecular ecology resources 23 (1) (2022)
Charlotte Nef, Mohammed-Amin Madoui, Éric Pelletier, Chris Bowler
Whole-genome scanning reveals environmental selection mechanisms that shape diversity in populations of the epipelagic diatom Chaetoceros. PLoS biology 20 (11) (2022)
Kurt H Kjær, Mikkel Winther Pedersen, Bianca De Sanctis, Binia De Cahsan, Thorfinn S Korneliussen, Christian S Michelsen, Karina K Sand, Stanislav Jelavić, Anthony H Ruter, Astrid M A Schmidt, Kristian Kjellerup Kjeldsen, Alexey S Tesakov, Ian Snowball, John C Gosse, Inger Greve Alsos, Yucheng Wang, Christoph Dockter, Magnus Rasmussen, Morten Egevang Jørgensen, Birgitte Skadhauge, Ana Prohaska, Jeppe Aagaard Kristensen, Morten Bjerager, Morten E Allentoft, Eric Coissac, null null, Alexandra Rouillard, Alexandra Simakova, Antonio Fernandez-Guerra, Chris Bowler, Marc Macias-Fauria, Lasse Vinner, John J Welch, Alan J Hidy, Martin Sikora, Matthew J Collins, Richard Durbin, Nicolaj K Larsen, Eske Willerslev
A 2-million-year-old ecosystem in Greenland uncovered by environmental DNA. Nature 612 (7939) (2022)
Daniel J Richter, Romain Watteaux, Thomas Vannier, Jade Leconte, Paul Frémont, Gabriel Reygondeau, Nicolas Maillet, Nicolas Henry, Gaëtan Benoit, Ophélie Da Silva, Tom O Delmont, Antonio Fernandez-Guerra, Samir Suweis, Romain Narci, Cédric Berney, Damien Eveillard, Frederick Gavory, Lionel Guidi, Karine Labadie, Eric Mahieu, Julie Poulain, Sarah Romac, Simon Roux, Céline Dimier, Stefanie Kandels, Marc Picheral, Sarah Searson, null null, Stéphane Pesant, Jean-Marc Aury, Jennifer R Brum, Claire Lemaitre, Eric Pelletier, Peer Bork, Shinichi Sunagawa, Fabien Lombard, Lee Karp-Boss, Chris Bowler, Matthew B Sullivan, Eric Karsenti, Mahendra Mariadassou, Ian Probert, Pierre Peterlongo, Patrick Wincker, Colomban de Vargas, Maurizio Ribera d'Alcalà, Daniele Iudicone, Olivier Jaillon
Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems. eLife 11 (2022)
Richard G Dorrell, Adrien Villain, Benoît Perez-Lamarque, Guillemette Audren de Kerdrel, Giselle McCallum, Andrew K Watson, Ouardia Ait-Mohamed, Adriana Alberti, Erwann Corre, Kyle R Frischkorn, Juan J Pierella Karlusich, Eric Pelletier, Hélène Morlon, Chris Bowler, Guillaume Blanc
Phylogenomic fingerprinting of tempo and functions of horizontal gene transfer within ochrophytes. Proceedings of the National Academy of Sciences of the United States of America 118 (4) (2021)
Tom O Delmont, Juan J Pierella Karlusich, Iva Veseli, Jessika Füssel, A Murat Eren, Rachel A Foster, Chris Bowler, Patrick Wincker, Eric Pelletier
Heterotrophic bacterial diazotrophs are more abundant than their cyanobacterial counterparts in metagenomes covering most of the sunlit ocean. The ISME journal (2021)
Samuel Chaffron, Erwan Delage, Marko Budinich, Damien Vintache, Nicolas Henry, Charlotte Nef, Mathieu Ardyna, Ahmed A Zayed, Pedro C Junger, Pierre E Galand, Connie Lovejoy, Alison E Murray, Hugo Sarmento, null null, Silvia G Acinas, Marcel Babin, Daniele Iudicone, Olivier Jaillon, Eric Karsenti, Patrick Wincker, Lee Karp-Boss, Matthew B Sullivan, Chris Bowler, Colomban de Vargas, Damien Eveillard
Environmental vulnerability of the global ocean epipelagic plankton community interactome. Science advances 7 (35) (2021)
Marta Royo-Llonch, Pablo Sánchez, Clara Ruiz-González, Guillem Salazar, Carlos Pedrós-Alió, Marta Sebastián, Karine Labadie, Lucas Paoli, Federico M Ibarbalz, Lucie Zinger, Benjamin Churcheward, null null, Samuel Chaffron, Damien Eveillard, Eric Karsenti, Shinichi Sunagawa, Patrick Wincker, Lee Karp-Boss, Chris Bowler, Silvia G Acinas
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean. Nature microbiology 6 (12) (2021)
Guilhem Sommeria-Klein, Romain Watteaux, Federico M Ibarbalz, Juan J Pierella Karlusich, Daniele Iudicone, Chris Bowler, Hélène Morlon
Global drivers of eukaryotic plankton biogeography in the sunlit ocean. Science (New York, N.Y.) 374 (6567) (2021)
Linda Armbrecht, Raphael Eisenhofer, José Utge, Elizabeth C Sibert, Fabio Rocha Jimenez Vieira, Ryan Ward, Juan J Pierella Karlusich, Leila Tirichine, Richard D Norris, Mindi Summers, Chris Bowler
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics. ISME communications 1 (1) (2021)
Eva Kotabova, Ronald Malych, Juan J Pierella Karlusich, Elena Kazamia, Meri Eichner, Jan Mach, Emmanuel Lesuisse, Chris Bowler, Ondřej Prášil, Robert Sutak
Complex Response of the Chlorarachniophyte Bigelowiella natans to Iron Availability. mSystems 6 (1) (2021)
Linda Armbrecht, Raphael Eisenhofer, José Utge, Elizabeth C Sibert, Fabio Rocha Jimenez Vieira, Ryan Ward, Juan J Pierella Karlusich, Leila Tirichine, Richard D Norris, Mindi Summers, Chris Bowler
Paleo-diatom composition from Santa Barbara Basin deep-sea sediments: a comparison of 18S-V9 and diat-rbcL metabarcoding vs shotgun metagenomics. ISME communications 1 (1) (2021)
Silvia G Acinas, Pablo Sánchez, Guillem Salazar, Francisco Miguel Cornejo-Castillo, Marta Sebastián, Ramiro Logares, Marta Royo-Llonch, Lucas Paoli, Shinichi Sunagawa, Pascal Hingamp, Hiroyuki Ogata, Gipsi Lima-Mendez, Simon Roux, José M González, Jesús Maria Arrieta, Intikhab S Alam, Allan Kamau, Chris Bowler, Jeroen Raes, Stéphane Pesant, Peer Bork, Susana Agustí, Takashi Gojobori, Dolors Vaqué, Matthew B Sullivan, Carlos Pedrós-Alió, Ramon Massana, Carlos M Duarte, Josep M Gasol
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities. Communications biology 4 (1) (2021)
Xue Zhao, Achal Rastogi, Anne Flore Deton Cabanillas, Ouardia Ait Mohamed, Catherine Cantrel, Berangère Lombard, Omer Murik, Auguste Genovesio, Chris Bowler, Daniel Bouyer, Damarys Loew, Xin Lin, Alaguraj Veluchamy, Fabio Rocha Jimenez Vieira, Leila Tirichine
Genome wide natural variation of H3K27me3 selectively marks genes predicted to be important for cell differentiation in Phaeodactylum tricornutum. The New phytologist 229 (6) (2020)
Drahomíra Faktorová, R Ellen R Nisbet, José A Fernández Robledo, Elena Casacuberta, Lisa Sudek, Andrew Ellis Allen, Manuel Ares, Cristina Aresté, Cecilia Balestreri, Adrian C Barbrook, Patrick Beardslee, Sara Bender, David S Booth, François-Yves Bouget, Chris Bowler, Susana A Breglia, Colin Brownlee, Gertraud Burger, Heriberto Cerutti, Rachele Cesaroni, Miguel A Chiurillo, Thomas Clemente, Duncan B Coles, Jackie L Collier, Elizabeth C Cooney, Kathryn Coyne, Roberto Docampo, Christopher L Dupont, Virginia P Edgcomb, Elin Einarsson, Pía A Elustondo, Fernan Federici, Veronica Freire-Beneitez, Nastasia J Freyria, Kodai Fukuda, Paulo A García, Peter R Girguis, Fatma Gomaa, Sebastian G Gornik, Jian Guo, Vladimír Hampl, Yutaka Hanawa, Esteban R Haro-Contreras, Elisabeth Hehenberger, Andrea Highfield, Yoshihisa Hirakawa, Amanda Hopes, Christopher J Howe, Ian Hu, Jorge Ibañez, Nicholas A T Irwin, Yuu Ishii, Natalia Ewa Janowicz, Adam C Jones, Ambar Kachale, Konomi Fujimura-Kamada, Binnypreet Kaur, Jonathan Z Kaye, Eleanna Kazana, Patrick J Keeling, Nicole King, Lawrence A Klobutcher, Noelia Lander, Imen Lassadi, Zhuhong Li, Senjie Lin, Jean-Claude Lozano, Fulei Luan, Shinichiro Maruyama, Tamara Matute, Cristina Miceli, Jun Minagawa, Mark Moosburner, Sebastián R Najle, Deepak Nanjappa, Isabel C Nimmo, Luke Noble, Anna M G Novák Vanclová, Mariusz Nowacki, Isaac Nuñez, Arnab Pain, Angela Piersanti, Sandra Pucciarelli, Jan Pyrih, Joshua S Rest, Mariana Rius, Deborah Robertson, Albane Ruaud, Iñaki Ruiz-Trillo, Monika A Sigg, Pamela A Silver, Claudio H Slamovits, G Jason Smith, Brittany N Sprecher, Rowena Stern, Estienne C Swart, Anastasios D Tsaousis, Lev M Z Tsypin, Aaron P Turkewitz, Jernej Turnšek, Matus Valach, Valérie Vergé, Peter von Dassow, Tobias von der Haar, Ross F Waller, Lu Wang, Xiaoxue Wen, Glen Wheeler, April Woods, Huan Zhang, Thomas Mock, Alexandra Z Worden, Julius Lukeš
Genetic tool development in marine protists: emerging model organisms for experimental cell biology. Nature methods 17 (5) (2020)
Hisashi Endo, Romain Blanc-Mathieu, Yanze Li, Guillem Salazar, Nicolas Henry, Karine Labadie, Colomban de Vargas, Matthew B Sullivan, Chris Bowler, Patrick Wincker, Lee Karp-Boss, Shinichi Sunagawa, Hiroyuki Ogata
Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions. Nature ecology & evolution 4 (12) (2020)
Flora Vincent, Chris Bowler
Diatoms Are Selective Segregators in Global Ocean Planktonic Communities. mSystems 5 (1) (2020)
Shinichi Sunagawa, Silvia G Acinas, Peer Bork, Chris Bowler, null null, Damien Eveillard, Gabriel Gorsky, Lionel Guidi, Daniele Iudicone, Eric Karsenti, Fabien Lombard, Hiroyuki Ogata, Stephane Pesant, Matthew B Sullivan, Patrick Wincker, Colomban de Vargas
Tara Oceans: towards global ocean ecosystems biology. Nature reviews. Microbiology 18 (8) (2020)
Achal Rastogi, Fabio Rocha Jimenez Vieira, Anne-Flore Deton-Cabanillas, Alaguraj Veluchamy, Catherine Cantrel, Gaohong Wang, Pieter Vanormelingen, Chris Bowler, Gwenael Piganeau, Hanhua Hu, Leila Tirichine
A genomics approach reveals the global genetic polymorphism, structure, and functional diversity of ten accessions of the marine model diatom Phaeodactylum tricornutum. The ISME journal 14 (2) (2019)
Serge Planes, Denis Allemand, Sylvain Agostini, Bernard Banaigs, Emilie Boissin, Emmanuel S Boss, Guillaume Bourdin, Chris Bowler, Eric Douville, J Michel Flores, Didier Forcioli, Paola Furla, Pierre E Galand, Jean-François Ghiglione, Eric Gilson, Fabien Lombard, Clémentine Moulin, Stéphane Pesant, Julie Poulain, Stéphanie Reynaud, Sarah Romac, Matthew B Sullivan, Shinichi Sunagawa, Olivier P Thomas, Romain Troublé, Colomban de Vargas, Rebecca L Vega Thurber, Christian R Voolstra, Patrick Wincker, Didier Zoccola, null null
The Tara Pacific expedition-A pan-ecosystemic approach of the "-omics" complexity of coral reef holobionts across the Pacific Ocean. PLoS biology 17 (9) (2019)
Olga Flegontova, Pavel Flegontov, Shruti Malviya, Julie Poulain, Colomban de Vargas, Chris Bowler, Julius Lukeš, Aleš Horák
Neobodonids are dominant kinetoplastids in the global ocean. Environmental microbiology 20 (2) (2019)
Richard G Dorrell, Tomonori Azuma, Mami Nomura, Guillemette Audren de Kerdrel, Lucas Paoli, Shanshan Yang, Chris Bowler, Ken-Ichiro Ishii, Hideaki Miyashita, Gillian H Gile, Ryoma Kamikawa
Principles of plastid reductive evolution illuminated by nonphotosynthetic chrysophytes. Proceedings of the National Academy of Sciences of the United States of America 116 (14) (2019)
Omer Murik, Leila Tirichine, Judit Prihoda, Yann Thomas, Wagner L Araújo, Andrew Ellis Allen, Alisdair R Fernie, Chris Bowler
Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom. The New phytologist 221 (3) (2018)
Karine Leblanc, Bernard Quéguiner, Frédéric Diaz, Véronique Cornet, Monica Michel-Rodriguez, Xavier Durrieu de Madron, Chris Bowler, Shruti Malviya, Melilotus Thyssen, Gérald Grégori, Mathieu Rembauville, Olivier Grosso, Julie Poulain, Colomban de Vargas, Mireille Pujo-Pay, Pascal Conan
Nanoplanktonic diatoms are globally overlooked but play a role in spring blooms and carbon export. Nature communications 9 (1) (2018)
Elena Kazamia, Robert Sutak, Javier Paz-Yepes, Richard G Dorrell, Fabio Rocha Jimenez Vieira, Jan Mach, Joe Morrissey, Sébastien Léon, France Lam, Eric Pelletier, Jean-Michel Camadro, Chris Bowler, Emmanuel Lesuisse
Endocytosis-mediated siderophore uptake as a strategy for Fe acquisition in diatoms. Science advances 4 (5) (2018)
Amr A Nassrallah, Martin Rougée, Clara Bourbousse, Stephanie Drevensek, Sandra Fonseca, Elisa Iniesto, Ouardia Ait-Mohamed, Anne-Flore Deton-Cabanillas, Gerald Zabulon, Ikhlak Ahmed, David Stroebel, Vanessa Masson, Berangere Lombard, Dominique Eeckhout, Kris Gevaert, Damarys Loew, Auguste Genovesio, Cecile Breyton, Geert De Jaeger, Chris Bowler, Vicente Rubio, Fredy Barneche
DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis. eLife 7 (2018)
Anne-Sophie Benoiston, Federico M Ibarbalz, Lucie Bittner, Lionel Guidi, Oliver Jahn, Stephanie Dutkiewicz, Chris Bowler
The evolution of diatoms and their biogeochemical functions. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 372 (1728) (2018)
Zhanru Shao, Yann Thomas, Lea Hembach, Xiaohui Xing, Delin Duan, Bruno M Moerschbacher, Vincent Bulone, Leila Tirichine, Chris Bowler
Comparative characterization of putative chitin deacetylases from Phaeodactylum tricornutum and Thalassiosira pseudonana highlights the potential for distinct chitin-based metabolic processes in diatoms. The New phytologist 221 (4) (2018)
Richard G Dorrell, Gillian Gile, Giselle McCallum, Raphaël Méheust, Eric P Bapteste, Christen M Klinger, Loraine Brillet-Guéguen, Katalina D Freeman, Daniel J Richter, Chris Bowler
Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome. eLife 6 (2017)

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Chris Bowler