Rujia Dai

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 20

Top Topics

Bipolar Disorder

Transcription Factor

Top Venues

Science (New York, N.Y.)

Science translational medicine

Science advances

bioRxiv : the preprint server for biology

This page only lists publications with an associated author ORCID identifier.

Publications

Cindy Wen, Michael Margolis, Rujia Dai, Pan Zhang, Pawel F Przytycki, Daniel D Vo, Arjun Bhattacharya, Nana Matoba, Miao Tang, Chuan Jiao, Minsoo Kim, Ellen Tsai, Celine Hoh, Nil Aygün, Rebecca L Walker, Christos Chatzinakos, Declan Clarke, Henry E Pratt, null null, Mette A Peters, Mark B Gerstein, Nikolaos P Daskalakis, Nishigandha Phalke, Andrew E Jaffe, Joel E Kleinman, Thomas M Hyde, Daniel R Weinberger, Nicholas J Bray, Nenad Sestan, Daniel H Geschwind, Kathryn Roeder, Alexander Gusev, Bogdan Pasaniuc, Jason L Stein, Michael I Love, Katherine S Pollard, Yanling Liu, Michael J Gandal, null null
Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain. Science (New York, N.Y.) 384 (6698) (2024)
Rujia Dai, Ming Zhang, Tianyao Chu, Richard Kopp, Chunling Zhang, Kefu Liu, Yue Wang, Xusheng Wang, Chao Chen, Yanling Liu
Precision and Accuracy of Single-Cell/Nuclei RNA Sequencing Data. bioRxiv : the preprint server for biology (2024)
Chiung-Ting Wu, Dongping Du, Lulu Chen, Rujia Dai, Yanling Liu, Guoqiang Yu, Saurabh Bhardwaj, Sarah J Parker, Zhen Zhang, Robert Clarke, David M Herrington, Yue Wang
CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution. Bioinformatics (Oxford, England) 40 (3) (2024)
Yan Xia, Cuihua Xia, Yi Jiang, Yu Chen, Jiaqi Zhou, Rujia Dai, Cong Han, Zhongzheng Mao, null null, Yanling Liu, Chao Chen
Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders. Science translational medicine 16 (749) (2024)
Yan Xia, Cuihua Xia, Yi Jiang, Yu Chen, Jiaqi Zhou, Rujia Dai, Cong Han, Zhongzheng Mao, PsychENCODE Consortium, Yanling Liu, Chao Chen, null null
Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders. Science translational medicine (2024)
Cindy Wen, Michael Margolis, Rujia Dai, Pan Zhang, Pawel F Przytycki, Daniel D Vo, Arjun Bhattacharya, Nana Matoba, Miao Tang, Chuan Jiao, Minsoo Kim, Ellen Tsai, Celine Hoh, Nil Aygün, Rebecca L Walker, Christos Chatzinakos, Declan Clarke, Henry E Pratt, null null, Mette A Peters, Mark B Gerstein, Nikolaos P Daskalakis, Nishigandha Phalke, Andrew E Jaffe, Joel E Kleinman, Thomas M Hyde, Daniel R Weinberger, Nicholas J Bray, Nenad Sestan, Daniel H Geschwind, Kathryn Roeder, Alexander Gusev, Bogdan Pasaniuc, Jason L Stein, Michael I Love, Katherine S Pollard, Yanling Liu, Michael J Gandal, null null
Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain. Science (New York, N.Y.) 384 (6698) (2024)
Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos, Yue Wang, Xusheng Wang, Dalila Pinto, Sidney H Wang, Chunling Zhang, null null, Chao Chen, Yanling Liu
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. Science advances 10 (21) (2024)
Rujia Dai, Ming Zhang, Tianyao Chu, Richard Kopp, Chunling Zhang, Kefu Liu, Yue Wang, Xusheng Wang, Chao Chen, Yanling Liu
Precision and Accuracy of Single-Cell/Nuclei RNA Sequencing Data. bioRxiv : the preprint server for biology (2024)
Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos, Yue Wang, Xusheng Wang, Dalila Pinto, Sidney H Wang, Chunling Zhang, null null, Chao Chen, Yanling Liu
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. Science advances 10 (21) (2024)
Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos, Yue Wang, Xusheng Wang, Dalila Pinto, Sidney H Wang, Chunling Zhang, null null, Chao Chen, Yanling Liu
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. Science advances 10 (21) (2024)
Cindy Wen, Michael Margolis, Rujia Dai, Pan Zhang, Pawel F Przytycki, Daniel D Vo, Arjun Bhattacharya, Nana Matoba, Miao Tang, Chuan Jiao, Minsoo Kim, Ellen Tsai, Celine Hoh, Nil Aygün, Rebecca L Walker, Christos Chatzinakos, Declan Clarke, Henry E Pratt, null null, Mette A Peters, Mark B Gerstein, Nikolaos P Daskalakis, Nishigandha Phalke, Andrew E Jaffe, Joel E Kleinman, Thomas M Hyde, Daniel R Weinberger, Nicholas J Bray, Nenad Sestan, Daniel H Geschwind, Kathryn Roeder, Alexander Gusev, Bogdan Pasaniuc, Jason L Stein, Michael I Love, Katherine S Pollard, Yanling Liu, Michael J Gandal, null null
Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain. Science (New York, N.Y.) 384 (6698) (2024)
Cindy Wen, Michael Margolis, Rujia Dai, Pan Zhang, Pawel F Przytycki, Daniel D Vo, Arjun Bhattacharya, Nana Matoba, Miao Tang, Chuan Jiao, Minsoo Kim, Ellen Tsai, Celine Hoh, Nil Aygün, Rebecca L Walker, Christos Chatzinakos, Declan Clarke, Henry E Pratt, null null, Mette A Peters, Mark B Gerstein, Nikolaos P Daskalakis, Nishigandha Phalke, Andrew E Jaffe, Joel E Kleinman, Thomas M Hyde, Daniel R Weinberger, Nicholas J Bray, Nenad Sestan, Daniel H Geschwind, Kathryn Roeder, Alexander Gusev, Bogdan Pasaniuc, Jason L Stein, Michael I Love, Katherine S Pollard, Yanling Liu, Michael J Gandal, null null
Cross-ancestry atlas of gene, isoform, and splicing regulation in the developing human brain. Science (New York, N.Y.) 384 (6698) (2024)
Chiung-Ting Wu, Dongping Du, Lulu Chen, Rujia Dai, Yanling Liu, Guoqiang Yu, Saurabh Bhardwaj, Sarah J Parker, Zhen Zhang, Robert Clarke, David M Herrington, Yue Wang
CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution. Bioinformatics (Oxford, England) 40 (3) (2024)
Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, Gabriel E Hoffman, Panagiotis Roussos, Yue Wang, Xusheng Wang, Dalila Pinto, Sidney H Wang, Chunling Zhang, null null, Chao Chen, Yanling Liu
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. Science advances 10 (21) (2024)
Rujia Dai, Ming Zhang, Tianyao Chu, Richard Kopp, Chunling Zhang, Kefu Liu, Yue Wang, Xusheng Wang, Chao Chen, Yanling Liu
Precision and Accuracy of Single-Cell/Nuclei RNA Sequencing Data. bioRxiv : the preprint server for biology (2024)
Yan Xia, Cuihua Xia, Yi Jiang, Yu Chen, Jiaqi Zhou, Rujia Dai, Cong Han, Zhongzheng Mao, null null, Yanling Liu, Chao Chen
Transcriptomic sex differences in postmortem brain samples from patients with psychiatric disorders. Science translational medicine 16 (749) (2024)
Rujia Dai, Tianyao Chu, Ming Zhang, Xuan Wang, Alexandre Jourdon, Feinan Wu, Jessica Mariani, Flora M Vaccarino, Donghoon Lee, John F Fullard, Gabriel E Hoffman, Panos Roussos, Yue Wang, Xusheng Wang, Dalila Pinto, Sidney H Wang, Chunling Zhang, null null, Chao Chen, Yanling Liu
Evaluating performance and applications of sample-wise cell deconvolution methods on human brain transcriptomic data. bioRxiv : the preprint server for biology (2023)
Michael J Gandal, Pan Zhang, Evi Hadjimichael, Rebecca L Walker, Chao Chen, Shuang Liu, Hyejung Won, Harm van Bakel, Merina Varghese, Yong-Jun Wang, Annie W Shieh, Jillian Haney, Sepideh Parhami, Judson Belmont, Minsoo Kim, Patricia Moran Losada, Zenab Khan, Justyna Mleczko, Yan Xia, Rujia Dai, Daifeng Wang, Yucheng T Yang, Min Xu, Kenneth Fish, Patrick R Hof, Jonathan Warrell, Dominic Fitzgerald, Kevin P White, Andrew E Jaffe, null null, Mette A Peters, Mark B Gerstein, Yanling Liu, Lilia M Iakoucheva, Dalila Pinto, Daniel H Geschwind
Transcriptome-wide isoform-level dysregulation in ASD, schizophrenia, and bipolar disorder. Science (New York, N.Y.) 362 (6420) (2019)
Qingtuan Meng, Kangli Wang, Tonya Brunetti, Yan Xia, Chuan Jiao, Rujia Dai, Dominic Fitzgerald, Amber Baldwin, Lindsey Jay, Heather Eckart, Kay Grennan, Yuka Imamura Kawasawa, Mingfeng Li, Nenad Sestan, Kevin P White, Chao Chen, Yanling Liu
The DGCR5 long noncoding RNA may regulate expression of several schizophrenia-related genes. Science translational medicine 10 (472) (2018)
Chao Chen, Qingtuan Meng, Yan Xia, Chaodong Ding, Le Wang, Rujia Dai, Lijun Cheng, Preethi Gunaratne, Richard A Gibbs, Shishi Min, Cristian Coarfa, Jeffrey G Reid, Chunling Zhang, Chuan Jiao, Yi Jiang, Gina Giase, Amber Baldwin, Dominic Fitzgerald, Tonya Brunetti, Annie W Shieh, Cuihua Xia, Yongjun Wang, Yunpeng Wang, Judith A Badner, Elliot S Gershon, Kevin P White, Yanling Liu
The transcription factor POU3F2 regulates a gene coexpression network in brain tissue from patients with psychiatric disorders. Science translational medicine 10 (472) (2018)