Ruth M Hall

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 60

Top Topics

Cystic Fibrosis

Antibiotic Resistance Genes

Top Venues

The Journal of antimicrobial chemotherapy

Microbiology spectrum

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Christopher J Harmer, Sarah M Cahill, Johanna J Kenyon, Ruth M Hall
Aminoglycoside resistance genes in early members of the Acinetobacter baumannii ST78A (SMAL, Italian clone) reside in an IS26-bounded island in the chromosome. The Journal of antimicrobial chemotherapy 79 (5) (2024)
Christopher J Harmer, Sarah M Cahill, Johanna J Kenyon, Ruth M Hall
Aminoglycoside resistance genes in early members of the Acinetobacter baumannii ST78A (SMAL, Italian clone) reside in an IS26-bounded island in the chromosome. The Journal of antimicrobial chemotherapy 79 (5) (2024)
Alexander S Shashkov, Nikolay P Arbatsky, Sof'ya N Senchenkova, Anastasiya A Kasimova, Andrei S Dmitrenok, Mikhail M Shneider, Yuriy A Knirel, Ruth M Hall, Johanna J Kenyon
Characterization of the carbapenem-resistant Acinetobacter baumannii clinical reference isolate BAL062 (CC2:KL58:OCL1): resistance properties and capsular polysaccharide structure. mSystems (2024)
Christopher J Harmer, Sarah M Cahill, Johanna J Kenyon, Ruth M Hall
Aminoglycoside resistance genes in early members of the Acinetobacter baumannii ST78A (SMAL, Italian clone) reside in an IS26-bounded island in the chromosome. The Journal of antimicrobial chemotherapy 79 (5) (2024)
Christopher J Harmer, Sarah M Cahill, Johanna J Kenyon, Ruth M Hall
Aminoglycoside resistance genes in early members of the Acinetobacter baumannii ST78A (SMAL, Italian clone) reside in an IS26-bounded island in the chromosome. The Journal of antimicrobial chemotherapy (2024)
Christopher J Harmer, Sarah M Cahill, Johanna J Kenyon, Ruth M Hall
Aminoglycoside resistance genes in early members of the Acinetobacter baumannii ST78A (SMAL, Italian clone) reside in an IS26-bounded island in the chromosome. The Journal of antimicrobial chemotherapy 79 (5) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy 79 (7) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy 79 (7) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR 88 (2) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy 79 (7) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy 79 (7) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy 79 (7) (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR 88 (2) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR 88 (2) (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Christopher J Harmer, Ruth M Hall
IS 26 and the IS 26 family: versatile resistance gene movers and genome reorganizers. Microbiology and molecular biology reviews : MMBR 88 (2) (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Christopher J Harmer, Messiah J Nelson, Francois Lebreton, Paphavee Lertsethtakarn, Patrick T McGann, Ruth M Hall
Distribution and expression of the aac(6')-Im (aacA16) aminoglycoside resistance gene. The Journal of antimicrobial chemotherapy (2024)
Rezwan Siddiquee, Carol H Pong, Ruth M Hall, Sandro F Ataide
A programmable seekRNA guides target selection by IS1111 and IS110 type insertion sequences. Nature communications 15 (1) (2024)
Olga Y Timoshina, Anastasiya A Kasimova, Mikhail M Shneider, Nikolay P Arbatsky, Alexander S Shashkov, Andrey A Shelenkov, Yuliya V Mikhailova, Anastasiya V Popova, Ruth M Hall, Yuriy A Knirel, Johanna J Kenyon
Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1. Microbiology spectrum 11 (1) (2023)
Carol H Pong, Jade E Peace, Christopher J Harmer, Ruth M Hall
The RuvABC Holliday Junction Processing System Is Not Required for IS 26 -Mediated Targeted Conservative Cointegrate Formation. Microbiology spectrum (2023)
Christopher J Harmer, Steven J Nigro, Ruth M Hall
Acinetobacter baumannii GC2 Sublineage Carrying the aac ( 6 ')- Im Amikacin, Netilmicin, and Tobramycin Resistance Gene Cassette. Microbiology spectrum (2023)
Olga Y Timoshina, Anastasiya A Kasimova, Mikhail M Shneider, Nikolay P Arbatsky, Alexander S Shashkov, Andrey A Shelenkov, Yuliya V Mikhailova, Anastasiya V Popova, Ruth M Hall, Yuriy A Knirel, Johanna J Kenyon
Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1. Microbiology spectrum 11 (1) (2023)
Nabil Karah, Valeria Mateo-Estrada, Santiago Castillo-Ramírez, Paul G Higgins, Benjamin Havenga, Wesaal Khan, Sara Domingues, Gabriela Jorge Da Silva, Laurent Poirel, Patrice Nordmann, Cecilia Ambrosi, Chaoying Ma, Siobhán McClean, María Paula Quiroga, Verónica E Alvarez, Daniela Centron, Raffaele Zarrilli, Johanna J Kenyon, Thomas A Russo, Benjamin A Evans, Andrés Opazo-Capurro, Rayane Rafei, Mounzer Hamze, Ziad Daoud, Irfan Ahmad, Philip N Rather, Ruth M Hall, Gottfried Wilharm, Bernt Eric Uhlin
The Acinetobacter baumannii website (Ab-web): a multidisciplinary knowledge hub, communication platform, and workspace. FEMS microbes 4 (2023)
Ting L Luo, Christopher J Harmer, Francois Lebreton, Jason Stam, Jason W Bennett, Ruth M Hall, Patrick T Mc Gann
Identification of an Outbreak Cluster of Extensively Antibiotic-Resistant GC1 Acinetobacter baumannii Isolates in U.S. Military Treatment Facilities. Microbiology spectrum (2023)
Olga Y Timoshina, Anastasiya A Kasimova, Mikhail M Shneider, Nikolay P Arbatsky, Alexander S Shashkov, Andrey A Shelenkov, Yuliya V Mikhailova, Anastasiya V Popova, Ruth M Hall, Yuriy A Knirel, Johanna J Kenyon
Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1. Microbiology spectrum (2023)
Anastasiya A Kasimova, Nowshin S Sharar, Stephanie J Ambrose, Yuriy A Knirel, Mikhail M Shneider, Olga Y Timoshina, Anastasiya V Popova, Andrey V Perepelov, Andrey S Dmitrenok, Li Yang Hsu, Ruth M Hall, Johanna J Kenyon
The Acinetobacter baumannii K70 and K9 capsular polysaccharides consist of related K-units linked by the same Wzy polymerase and cleaved by the same phage depolymerases. Microbiology spectrum (2023)
Olga Y Timoshina, Anastasiya A Kasimova, Mikhail M Shneider, Nikolay P Arbatsky, Alexander S Shashkov, Andrey A Shelenkov, Yuliya V Mikhailova, Anastasiya V Popova, Ruth M Hall, Yuriy A Knirel, Johanna J Kenyon
Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1. Microbiology spectrum 11 (1) (2023)
Nikolay P Arbatsky, Anastasiya A Kasimova, Alexander S Shashkov, Mikhail M Shneider, Anastasiya V Popova, Dmitry A Shagin, Andrey A Shelenkov, Yuliya V Mikhailova, Yurii G Yanushevich, Ruth M Hall, Yuriy A Knirel, Johanna J Kenyon
Involvement of a Phage-Encoded Wzy Protein in the Polymerization of K127 Units To Form the Capsular Polysaccharide of Acinetobacter baumannii Isolate 36-1454. Microbiology spectrum 10 (3) (2022)
Christopher J Harmer, Francois Lebreton, Jason Stam, Patrick T Mc Gann, Ruth M Hall
Complete genome of the extensively antibiotic-resistant GC1 Acinetobacter baumannii isolate MRSN 56 reveals a novel route to fluoroquinolone resistance. The Journal of antimicrobial chemotherapy 77 (7) (2022)
Margaret M C Lam, Jonathan Koong, Kathryn E Holt, Ruth M Hall, Mohammad Hamidian
Detection and Typing of Plasmids in Acinetobacter baumannii Using rep Genes Encoding Replication Initiation Proteins. Microbiology spectrum (2022)
Stephanie J Ambrose, Mohammad Hamidian, Ruth M Hall
Extensively resistant Acinetobacter baumannii isolate RCH52 carries several resistance genes derived from an IncC plasmid. The Journal of antimicrobial chemotherapy 77 (4) (2022)
Christopher J Harmer, Francois Lebreton, Jason Stam, Patrick T McGann, Ruth M Hall
Mechanisms of IS 26 -Mediated Amplification of the aphA1 Gene Leading to Tobramycin Resistance in an Acinetobacter baumannii Isolate. Microbiology spectrum 10 (5) (2022)
Ruth M Hall
Comment on "the IS6 family, a clinically important group of insertion sequences including IS26" by Varani and co-authors. Mobile DNA 13 (1) (2022)
Stephanie J Ambrose, Benjamin A Evans, Ruth M Hall
Origin of the oxa235 carbapenem resistance gene found in transposon Tn6252. The Journal of antimicrobial chemotherapy 77 (4) (2022)
Johanna J Kenyon, Ruth M Hall
Updated analysis of the surface carbohydrate gene clusters in the diverse panel of Acinetobacter baumannii isolates. Antimicrobial agents and chemotherapy (2021)
Christopher J Harmer, Ruth M Hall
IS26 cannot move alone. The Journal of antimicrobial chemotherapy 76 (6) (2021)
Stephanie J Ambrose, Ruth M Hall
Origin of the dfrA44 trimethoprim resistance gene. The Journal of antimicrobial chemotherapy 76 (12) (2021)
Christopher J Harmer, Ruth M Hall
Targeted Conservative Cointegrate Formation Mediated by IS26 Family Members Requires Sequence Identity at the Reacting End. mSphere 6 (1) (2021)
Stephanie J Ambrose, Ruth M Hall
Identification of the dfrA4 trimethoprim resistance gene. The Journal of antimicrobial chemotherapy 76 (7) (2021)
Stephanie J Ambrose, Ruth M Hall
dfrA trimethoprim resistance genes found in Gram-negative bacteria: compilation and unambiguous numbering. The Journal of antimicrobial chemotherapy 76 (11) (2021)
Christopher J Harmer, Carol H Pong, Ruth M Hall
A brief guide to correct annotation of IS26 and variants. The Journal of antimicrobial chemotherapy 76 (8) (2021)
Christopher J Harmer, Ruth M Hall
IS26 Family Members IS257 and IS1216 Also Form Cointegrates by Copy-In and Targeted Conservative Routes. mSphere 5 (1) (2020)
Claire de Curraize, Eliane Siebor, Véronique Varin, Catherine Neuwirth, Ruth M Hall
Two New SGI1-LK Variants Found in Proteus mirabilis and Evolution of the SGI1-HKL Group of Salmonella Genomic Islands. mSphere 5 (2) (2020)
Claire de Curraize, Eliane Siebor, Véronique Varin, Catherine Neuwirth, Ruth M Hall
Erratum for de Curraize et al., "Two New SGI1-LK Variants Found in Proteus mirabilis and Evolution of the SGI1-HKL Group of Salmonella Genomic Islands". mSphere 5 (3) (2020)
Mohammad Hamidian, Ryan R Wick, Louise M Judd, Kathryn E Holt, Ruth M Hall
Complete Genome Sequence of A388, an Antibiotic-Resistant Acinetobacter baumannii Global Clone 1 Isolate from Greece. Microbiology resource announcements 8 (41) (2019)
Johanna J Kenyon, Nikolay P Arbatsky, Mikhail M Shneider, Anastasiya V Popova, Andrei S Dmitrenok, Anastasiya A Kasimova, Alexander S Shashkov, Ruth M Hall, Yuriy A Knirel
The K46 and K5 capsular polysaccharides produced by Acinetobacter baumannii NIPH 329 and SDF have related structures and the side-chain non-ulosonic acids are 4-O-acetylated by phage-encoded O-acetyltransferases. PloS one 14 (6) (2019)
Steven J Nigro, Ryan Wick, Kathryn E Holt, Ruth M Hall
Complete Genome Sequence of WM99c, an Antibiotic-Resistant Acinetobacter baumannii Global Clone 2 (GC2) Strain Representing an Australian GC2 Lineage. Microbiology resource announcements 7 (22) (2018)
Grace A Blackwell, Ruth M Hall
The tet39 Determinant and the msrE-mphE Genes in Acinetobacter Plasmids Are Each Part of Discrete Modules Flanked by Inversely Oriented pdif (XerC-XerD) Sites. Antimicrobial agents and chemotherapy 61 (8) (2017)
Mohammad Hamidian, Pratap Venepally, Ruth M Hall, Mark D Adams
Corrected Genome Sequence of Acinetobacter baumannii Strain AB0057, an Antibiotic-Resistant Isolate from Lineage 1 of Global Clone 1. Genome announcements 5 (35) (2017)
Mohammad Hamidian, Steven J Nigro, Ruth M Hall
Problems with the Oxford Multilocus Sequence Typing Scheme for Acinetobacter baumannii: Do Sequence Type 92 (ST92) and ST109 Exist? Journal of clinical microbiology 55 (7) (2017)
Grace A Blackwell, Mohammad Hamidian, Ruth M Hall
IncM Plasmid R1215 Is the Source of Chromosomally Located Regions Containing Multiple Antibiotic Resistance Genes in the Globally Disseminated Acinetobacter baumannii GC1 and GC2 Clones. mSphere 1 (3) (2016)
Mohammad Hamidian, Ruth M Hall
Acinetobacter baumannii ATCC 19606 Carries GIsul2 in a Genomic Island Located in the Chromosome. Antimicrobial agents and chemotherapy 61 (1) (2016)
Christopher J Harmer, Ruth M Hall
IS26-Mediated Formation of Transposons Carrying Antibiotic Resistance Genes. mSphere 1 (2) (2016)
Grace A Blackwell, Steven J Nigro, Ruth M Hall
Evolution of AbGRI2-0, the Progenitor of the AbGRI2 Resistance Island in Global Clone 2 of Acinetobacter baumannii. Antimicrobial agents and chemotherapy 60 (3) (2015)