Sangwoo Kim

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 32

Top Venues

NPJ precision oncology

Nature communications

Nucleic acids research

Scientific data

Yonsei University College of Medicine

Korea Advanced Institute of Science and Technology (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Yonsei University College of Medicine Mar 01 2018

South Korea

Assistant professor :: Department of Biomedical Systems Informtics

Yonsei University College of Medicine Mar 01 2014

South Korea

Assistant professor :: Severance Biomedical Science Institute

University of California San Diego Aug 17 2010 - Dec 31 2013

United States

Postdoc Research Associate :: Computer Science and Engineering

Education History

Korea Advanced Institute of Science and Technology Mar 01 2005 - Jan 18 2010

South Korea

PHD :: Bio and Brain Engineering

Korea Advanced Institute of Science and Technology Sep 01 2002 - Aug 31 2004

South Korea

MSC :: Bio and Brain Engineering

Korea Advanced Institute of Science and Technology Mar 01 1998 - Aug 31 2002

South Korea

BSC :: Computer Science

Publications

Jiyun Hong, Eunwoo Choi, Dahee Kim, Mi-Kyoung Seo, Hyundeok Kang, BeumJin Park, Sangwoo Kim
Immunological subtyping of salivary gland cancer identifies histological origin-specific tumor immune microenvironment. NPJ precision oncology 8 (1) (2024)
Jiyun Hong, Eunwoo Choi, Dahee Kim, Mi-Kyoung Seo, Hyundeok Kang, BeumJin Park, Sangwoo Kim
Immunological subtyping of salivary gland cancer identifies histological origin-specific tumor immune microenvironment. NPJ precision oncology 8 (1) (2024)
Jiyun Hong, Eunwoo Choi, Dahee Kim, Mi-Kyoung Seo, Hyundeok Kang, BeumJin Park, Sangwoo Kim
Immunological subtyping of salivary gland cancer identifies histological origin-specific tumor immune microenvironment. NPJ precision oncology 8 (1) (2024)
Jung Ho Kim, Jiyun Hong, Ji Ae Lee, Minsun Jung, Eunwoo Choi, Nam-Yun Cho, Gyeong Hoon Kang, Sangwoo Kim
Immune microenvironmental heterogeneity according to tumor DNA methylation phenotypes in microsatellite instability-high colorectal cancers. Cancer immunology, immunotherapy : CII 73 (11) (2024)
Young Soo Chung, Seungseok Kang, Jisu Kim, Sangbo Lee, Sangwoo Kim
CLEMENT: genomic decomposition and reconstruction of non-tumor subclones. Nucleic acids research 52 (14) (2024)
Dawoon E Jung, Mi-Kyoung Seo, Jung Hyun Jo, Kahee Kim, Chanyang Kim, Hyundeok Kang, Soo Been Park, Hee Seung Lee, Sangwoo Kim, Si Young Song
PUM1-TRAF3 fusion protein activates non-canonical NF-κB signaling via rescued NIK in biliary tract cancer. NPJ precision oncology 8 (1) (2024)
Dawoon E Jung, Mi-Kyoung Seo, Jung Hyun Jo, Kahee Kim, Chanyang Kim, Hyundeok Kang, Soo Been Park, Hee Seung Lee, Sangwoo Kim, Si Young Song
PUM1-TRAF3 fusion protein activates non-canonical NF-κB signaling via rescued NIK in biliary tract cancer. NPJ precision oncology 8 (1) (2024)
Il Bin Kim, Myeong-Heui Kim, Saehoon Jung, Woo Kyeong Kim, Junehawk Lee, Young Seok Ju, Maree J Webster, Sanghyeon Kim, Ja Hye Kim, Hyun Jung Kim, Junho Kim, Sangwoo Kim, Jeong Ho Lee
Low-level brain somatic mutations in exonic regions are collectively implicated in autism with germline mutations in autism risk genes. Experimental & molecular medicine (2024)
Dawoon E Jung, Mi-Kyoung Seo, Jung Hyun Jo, Kahee Kim, Chanyang Kim, Hyundeok Kang, Soo Been Park, Hee Seung Lee, Sangwoo Kim, Si Young Song
PUM1-TRAF3 fusion protein activates non-canonical NF-κB signaling via rescued NIK in biliary tract cancer. NPJ precision oncology 8 (1) (2024)
Young Soo Chung, Seungseok Kang, Jisu Kim, Sangbo Lee, Sangwoo Kim
CLEMENT: genomic decomposition and reconstruction of non-tumor subclones. Nucleic acids research 52 (14) (2024)
Young Soo Chung, Seungseok Kang, Jisu Kim, Sangbo Lee, Sangwoo Kim
CLEMENT: genomic decomposition and reconstruction of non-tumor subclones. Nucleic acids research (2024)
Eun-Jin Yun, Donghwi Kim, Sangwoo Kim, Jer-Tsong Hsieh, Seung Tae Baek
Targeting Wnt/β-catenin-mediated upregulation of oncogenic NLGN3 suppresses cancer stem cells in glioblastoma. Cell death & disease 14 (7) (2023)
Yoo-Jin Ha, Seungseok Kang, Jisoo Kim, Junhan Kim, Se-Young Jo, Sangwoo Kim
Comprehensive benchmarking and guidelines of mosaic variant calling strategies. Nature methods (2023)
Se-Young Jo, Namki Hong, Seunghyun Lee, Jong Ju Jeong, Jeongsoo Won, Jiho Park, Gi Jeong Kim, Sang Kyum Kim, Sangwoo Kim, Yumie Rhee
Genomic and transcriptomic profiling reveal molecular characteristics of parathyroid carcinoma. Experimental & molecular medicine (2023)
Bhumsuk Keam, Min Hee Hong, Seong Hoon Shin, Seong Gu Heo, Ji Eun Kim, Hee Kyung Ahn, Yun-Gyoo Lee, Keon Uk Park, Tak Yun, Keun-Wook Lee, Sung-Bae Kim, Sang-Cheol Lee, Min Kyoung Kim, Sang Hee Cho, So Yeon Oh, Sang-Gon Park, Shinwon Hwang, Byung-Ho Nam, Sangwoo Kim, Hye Ryun Kim, Hwan Jung Yun, null null
Personalized Biomarker-Based Umbrella Trial for Patients With Recurrent or Metastatic Head and Neck Squamous Cell Carcinoma: KCSG HN 15-16 TRIUMPH Trial. Journal of clinical oncology : official journal of the American Society of Clinical Oncology (2023)
Yoo-Jin Ha, Myung Joon Oh, Junhan Kim, Jisoo Kim, Seungseok Kang, John D Minna, Hyun Seok Kim, Sangwoo Kim
Establishment of reference standards for multifaceted mosaic variant analysis. Scientific data 9 (1) (2022)
Songyeon Lee, Byung-Joon Seung, In Seok Yang, Jueun Lee, Taewoong Ha, Hee-Myung Park, Jae-Ho Cheong, Sangwoo Kim, Jung-Hyang Sur, Geum-Sook Hwang, Hojung Nam
1 H NMR based urinary metabolites profiling dataset of canine mammary tumors. Scientific data 9 (1) (2022)
Jung Ho Kim, Mi-Kyoung Seo, Ji Ae Lee, Seung-Yeon Yoo, Hyeon Jeong Oh, Hyundeok Kang, Nam-Yun Cho, Jeong Mo Bae, Gyeong Hoon Kang, Sangwoo Kim
Genomic and transcriptomic characterization of heterogeneous immune subgroups of microsatellite instability-high colorectal cancers. Journal for immunotherapy of cancer 9 (12) (2022)
Yohan Yang, Eunyoung Kim, Sangwoo Kim
Insignificant effects of loss of heterozygosity in HLA in the efficacy of immune checkpoint blockade treatment. Genes & genomics 44 (4) (2022)
Seong Jin Choi, Dong-Uk Kim, Ji Yun Noh, Sangwoo Kim, Su-Hyung Park, Hye Won Jeong, Eui-Cheol Shin
T cell epitopes in SARS-CoV-2 proteins are substantially conserved in the Omicron variant. Cellular & molecular immunology 19 (3) (2022)
Ja Hye Kim, Shinwon Hwang, Hyeonju Son, Dongsun Kim, Il Bin Kim, Myeong-Heui Kim, Nam Suk Sim, Dong Seok Kim, Yoo-Jin Ha, Junehawk Lee, Hoon Chul Kang, Jeong Ho Lee, Sangwoo Kim
Analysis of low-level somatic mosaicism reveals stage and tissue-specific mutational features in human development. PLoS genetics 18 (9) (2022)
Jung Ho Kim, Jeong Hoon Hong, Yoon-La Choi, Ji Ae Lee, Mi-Kyoung Seo, Mi-Sook Lee, Sung Bin An, Min Jung Sung, Nam-Yun Cho, Sung-Su Kim, Young Kee Shin, Sangwoo Kim, Gyeong Hoon Kang
NTRK oncogenic fusions are exclusively associated with the serrated neoplasia pathway in the colorectum and begin to occur in sessile serrated lesions. The Journal of pathology 255 (4) (2021)
Sun Min Lim, Eunyoung Kim, Kyung Hae Jung, Sora Kim, Ja Seung Koo, Seung Il Kim, Seho Park, Hyung Seok Park, Byoung Woo Park, Young Up Cho, Ji Ye Kim, Soonmyung Paik, Nak-Jung Kwon, Gun Min Kim, Ji Hyoung Kim, Min Hwan Kim, Min Kyung Jeon, Sangwoo Kim, Joo Hyuk Sohn
Genomic landscape of extraordinary responses in metastatic breast cancer. Communications biology 4 (1) (2021)
Mi-Kyoung Seo, Soonmyung Paik, Sangwoo Kim
An Improved, Assay Platform Agnostic, Absolute Single Sample Breast Cancer Subtype Classifier. Cancers 12 (12) (2020)
Tae-Min Kim, In Seok Yang, Byung-Joon Seung, Sejoon Lee, Dohyun Kim, Yoo-Jin Ha, Mi-Kyoung Seo, Ka-Kyung Kim, Hyun Seok Kim, Jae-Ho Cheong, Jung-Hyang Sur, Hojung Nam, Sangwoo Kim
Cross-species oncogenic signatures of breast cancer in canine mammary tumors. Nature communications 11 (1) (2020)
Yeomin Yun, Sung-Ah Hong, Ka-Kyung Kim, Daye Baek, Dongsu Lee, Ashwini M Londhe, Minhyung Lee, Jihyeon Yu, Zachary T McEachin, Gary J Bassell, Robert Bowser, Chadwick M Hales, Sung-Rae Cho, Janghwan Kim, Ae Nim Pae, Eunji Cheong, Sangwoo Kim, Nicholas M Boulis, Sangsu Bae, Yoon Ha
CRISPR-mediated gene correction links the ATP7A M1311V mutations with amyotrophic lateral sclerosis pathogenesis in one individual. Communications biology 3 (1) (2020)
Junho Kim, Dachan Kim, Jae Seok Lim, Ju Heon Maeng, Hyeonju Son, Hoon-Chul Kang, Hojung Nam, Jeong Ho Lee, Sangwoo Kim
The use of technical replication for detection of low-level somatic mutations in next-generation sequencing. Nature communications 10 (1) (2019)
Se-Young Jo, Eunyoung Kim, Sangwoo Kim
Impact of mouse contamination in genomic profiling of patient-derived models and best practice for robust analysis. Genome biology 20 (1) (2019)
Gunho Lee, Hyang Joo Ryu, Ji Woon Choi, Hyundeok Kang, Woo Ick Yang, In Seok Yang, Mi-Kyoung Seo, Sangwoo Kim, Sun Och Yoon
Characteristic gene alterations in primary gastrointestinal T- and NK-cell lymphomas. Leukemia 33 (7) (2019)
Ka-Kyung Kim, Byung-Joon Seung, Dohyun Kim, Hee-Myung Park, Sejoon Lee, Doo-Won Song, Gunho Lee, Jae-Ho Cheong, Hojung Nam, Jung-Hyang Sur, Sangwoo Kim
Whole-exome and whole-transcriptome sequencing of canine mammary gland tumors. Scientific data 6 (1) (2019)
Jun Sung Park, Junehawk Lee, Eun Sun Jung, Myeong-Heui Kim, Il Bin Kim, Hyeonju Son, Sangwoo Kim, Sanghyeon Kim, Young Mok Park, Inhee Mook-Jung, Seok Jong Yu, Jeong Ho Lee
Brain somatic mutations observed in Alzheimer's disease associated with aging and dysregulation of tau phosphorylation. Nature communications 10 (1) (2019)
Hyeonju Son, Hyundeok Kang, Hyun Seok Kim, Sangwoo Kim
Somatic mutation driven codon transition bias in human cancer. Scientific reports 7 (1) (2017)

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Publication Activity (10 Years)

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Sangwoo Kim