Shidan Wang

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 20

Top Topics

Convolutional Neural Network

Clinical Practice

Top Venues

Cancer research

NPJ digital medicine

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Shidan Wang, Kaiwen Li, Qi Yin, Ji Ren, Jie Zhang
Semi-supervised generative adversarial learning for denoising adaptive optics retinal images. Biomedical optics express 15 (3) (2024)
Shidan Wang, Kaiwen Li, Qi Yin, Ji Ren, Jie Zhang
Semi-supervised generative adversarial learning for denoising adaptive optics retinal images. Biomedical optics express 15 (3) (2024)
Jingwei Huang, Donghan M Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi, Shidan Wang, Xian Cheng, Yujia Guo, Laura J Klesse, Guanghua Xiao, Eric D Peterson, Xiaowei Zhan, Yang Xie
A critical assessment of using ChatGPT for extracting structured data from clinical notes. NPJ digital medicine 7 (1) (2024)
Jingwei Huang, Donghan M Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi, Shidan Wang, Xian Cheng, Yujia Guo, Laura J Klesse, Guanghua Xiao, Eric D Peterson, Xiaowei Zhan, Yang Xie
A critical assessment of using ChatGPT for extracting structured data from clinical notes. NPJ digital medicine 7 (1) (2024)
Shijia Zhu, Naoto Kubota, Shidan Wang, Tao Wang, Guanghua Xiao, Yujin Hoshida
STIE: Single-cell level deconvolution, convolution, and clustering in in situ capturing-based spatial transcriptomics. Nature communications 15 (1) (2024)
Brian S White, Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B Neuhauser, Shidan Wang, Yvonne A Evrard, Li Chen, Ali Foroughi Pour, John D Landua, R Jay Mashl, Sherri R Davies, Bingliang Fang, Maria Gabriela Raso, Kurt W Evans, Matthew H Bailey, Yeqing Chen, Min Xiao, Jill C Rubinstein, Brian J Sanderson, Michael W Lloyd, Sergii Domanskyi, Lacey Elizabeth Dobrolecki, Maihi Fujita, Junya Fujimoto, Guanghua Xiao, Ryan C Fields, Jacqueline L Mudd, George X Xu, Melinda G Hollingshead, Shahanawaz Jiwani, Saul Acevedo, null null, Brandi N Davis-Dusenbery, Peter Nick Robinson, Jeffrey A Moscow, James H Doroshow, Nicholas Mitsiades, Salma Kaochar, Chong-Xian Pan, Luis G Carvajal Carmona, Alana L Welm, Bryan E Welm, Ramaswamy Govindan, Shunqiang Li, Michael A Davies, Jack A Roth, Funda Meric-Bernstam, Yang Xie, Meenhard Herylyn, Li Ding, Michael T Lewis, Carol J Bult, Dennis A Dean, Jeffrey H Chuang
A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis. Cancer research 84 (13) (2024)
Brian S White, Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B Neuhauser, Shidan Wang, Yvonne A Evrard, Li Chen, Ali Foroughi Pour, John D Landua, R Jay Mashl, Sherri R Davies, Bingliang Fang, Maria Gabriela Raso, Kurt W Evans, Matthew H Bailey, Yeqing Chen, Min Xiao, Jill C Rubinstein, Brian J Sanderson, Michael W Lloyd, Sergii Domanskyi, Lacey Elizabeth Dobrolecki, Maihi Fujita, Junya Fujimoto, Guanghua Xiao, Ryan C Fields, Jacqueline L Mudd, George X Xu, Melinda G Hollingshead, Shahanawaz Jiwani, Saul Acevedo, null null, Brandi N Davis-Dusenbery, Peter Nick Robinson, Jeffrey A Moscow, James H Doroshow, Nicholas Mitsiades, Salma Kaochar, Chong-Xian Pan, Luis G Carvajal Carmona, Alana L Welm, Bryan E Welm, Ramaswamy Govindan, Shunqiang Li, Michael A Davies, Jack A Roth, Funda Meric-Bernstam, Yang Xie, Meenhard Herylyn, Li Ding, Michael T Lewis, Carol J Bult, Dennis A Dean, Jeffrey H Chuang
A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis. Cancer research 84 (13) (2024)
Jingwei Huang, Donghan M Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi, Shidan Wang, Xian Cheng, Yujia Guo, Laura J Klesse, Guanghua Xiao, Eric D Peterson, Xiaowei Zhan, Yang Xie
A critical assessment of using ChatGPT for extracting structured data from clinical notes. NPJ digital medicine 7 (1) (2024)
Shijia Zhu, Naoto Kubota, Shidan Wang, Tao Wang, Guanghua Xiao, Yujin Hoshida
STIE: Single-cell level deconvolution, convolution, and clustering in in situ capturing-based spatial transcriptomics. Nature communications 15 (1) (2024)
Shidan Wang, Ruichen Rong, Qin Zhou, Donghan M Yang, Xinyi Zhang, Xiaowei Zhan, Justin Bishop, Zhikai Chi, Clare J Wilhelm, Siyuan Zhang, Curtis R Pickering, Mark G Kris, John D Minna, Yang Xie, Guanghua Xiao
Deep learning of cell spatial organizations identifies clinically relevant insights in tissue images. Nature communications 14 (1) (2023)
Zhuoyu Wen, Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W Jin, Donghan M Yang, Bo Yao, Shengjie Yang, Tao Wang, Yang Xie, Yujin Hoshida, Hao Zhu, Guanghua Xiao
Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images. Genes 14 (4) (2023)
Zhuoyu Wen, Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W Jin, Donghan M Yang, Bo Yao, Shengjie Yang, Tao Wang, Yang Xie, Yujin Hoshida, Hao Zhu, Guanghua Xiao
Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images. Genes 14 (4) (2023)
Xi Jiang, Lei Dong, Shidan Wang, Zhuoyu Wen, Mingyi Chen, Lin Xu, Guanghua Xiao, Qiwei Li
Reconstructing Spatial Transcriptomics at the Single-cell Resolution with BayesDeep. bioRxiv : the preprint server for biology (2023)
Zhuoyu Wen, Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W Jin, Donghan M Yang, Bo Yao, Shengjie Yang, Tao Wang, Yang Xie, Yujin Hoshida, Hao Zhu, Guanghua Xiao
Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images. Genes 14 (4) (2023)
Xinyi Zhang, Frederico Omar Gleber-Netto, Shidan Wang, Kevin W Jin, Donghan M Yang, Ann M Gillenwater, Jeffrey N Myers, Renata Ferrarotto, Curtis R Pickering, Guanghua Xiao
A Deep Learning Onion Peeling Approach to Measure Oral Epithelium Layer Number. Cancers 15 (15) (2023)
Zhuoyu Wen, Yu-Hsuan Lin, Shidan Wang, Naoto Fujiwara, Ruichen Rong, Kevin W Jin, Donghan M Yang, Bo Yao, Shengjie Yang, Tao Wang, Yang Xie, Yujin Hoshida, Hao Zhu, Guanghua Xiao
Deep-Learning-Based Hepatic Ploidy Quantification Using H&E Histopathology Images. Genes 14 (4) (2023)
Guanghua Xiao, Shidan Wang, Ruichen Rong, Donghan Yang, Xinyi Zhang, Xiaowei Zhan, Justin Bishop, Clare Wilhelm, Siyuan Zhang, Curtis Pickering, Mark Kris, John D Minna, Yang Xie
Deep Learning of Cell Spatial Organizations Identifies Clinically Relevant Insights in Tissue Images. Research square (2023)
Xi Jiang, Lei Dong, Shidan Wang, Zhuoyu Wen, Mingyi Chen, Lin Xu, Guanghua Xiao, Qiwei Li
Reconstructing Spatial Transcriptomics at the Single-cell Resolution with BayesDeep. bioRxiv : the preprint server for biology (2023)
Shidan Wang, Ruichen Rong, Donghan M Yang, Junya Fujimoto, Shirley Yan, Ling Cai, Danni Luo, Carmen Behrens, Edwin Roger Parra Cuentes, Bo Yao, Lin Xu, Xiaowei Zhan, Ignacio I Wistuba, John Minna, Yang Xie, Guanghua Xiao
Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer. Cancer research 80 (10) (2020)
Tianshi Lu, Shidan Wang, Lin Xu, Qinbo Zhou, Nirmish Singla, Jianjun Gao, Subrata Manna, Laurentiu M Pop, Zhiqun Xie, Mingyi Chen, Jason John Luke, James Brugarolas, Raquibul Hannan, Tao Wang
Tumor neoantigenicity assessment with CSiN score incorporates clonality and immunogenicity to predict immunotherapy outcomes. Science immunology 5 (44) (2020)