Guanghua Xiao

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 20

Top Topics

Small Cell Lung Cancer

High Throughput

Top Venues

BMC bioinformatics

Cancer research

Nature communications

Molecular cancer research : MCR

This page only lists publications with an associated author ORCID identifier.

Publications

Jackson Barth, Yuqiu Yang, Guanghua Xiao, Xinlei Wang
MetaNorm: incorporating meta-analytic priors into normalization of NanoString nCounter data. Bioinformatics (Oxford, England) 40 (1) (2024)
Jackson Barth, Yuqiu Yang, Guanghua Xiao, Xinlei Wang
MetaNorm: incorporating meta-analytic priors into normalization of NanoString nCounter data. Bioinformatics (Oxford, England) 40 (1) (2024)
James Zhu, Yunguan Wang, Woo Yong Chang, Alicia Malewska, Fabiana Napolitano, Jeffrey C Gahan, Nisha Unni, Min Zhao, Rongqing Yuan, Fangjiang Wu, Lauren Yue, Lei Guo, Zhuo Zhao, Danny Z Chen, Raquibul Hannan, Siyuan Zhang, Guanghua Xiao, Ping Mu, Ariella B Hanker, Douglas Strand, Carlos L Arteaga, Neil Desai, Xinlei Wang, Yang Xie, Tao Wang
Mapping cellular interactions from spatially resolved transcriptomics data. Nature methods (2024)
Shijia Zhu, Naoto Kubota, Shidan Wang, Tao Wang, Guanghua Xiao, Yujin Hoshida
STIE: Single-cell level deconvolution, convolution, and clustering in in situ capturing-based spatial transcriptomics. Nature communications 15 (1) (2024)
Brian S White, Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B Neuhauser, Shidan Wang, Yvonne A Evrard, Li Chen, Ali Foroughi Pour, John D Landua, R Jay Mashl, Sherri R Davies, Bingliang Fang, Maria Gabriela Raso, Kurt W Evans, Matthew H Bailey, Yeqing Chen, Min Xiao, Jill C Rubinstein, Brian J Sanderson, Michael W Lloyd, Sergii Domanskyi, Lacey Elizabeth Dobrolecki, Maihi Fujita, Junya Fujimoto, Guanghua Xiao, Ryan C Fields, Jacqueline L Mudd, George X Xu, Melinda G Hollingshead, Shahanawaz Jiwani, Saul Acevedo, null null, Brandi N Davis-Dusenbery, Peter Nick Robinson, Jeffrey A Moscow, James H Doroshow, Nicholas Mitsiades, Salma Kaochar, Chong-Xian Pan, Luis G Carvajal Carmona, Alana L Welm, Bryan E Welm, Ramaswamy Govindan, Shunqiang Li, Michael A Davies, Jack A Roth, Funda Meric-Bernstam, Yang Xie, Meenhard Herylyn, Li Ding, Michael T Lewis, Carol J Bult, Dennis A Dean, Jeffrey H Chuang
A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis. Cancer research 84 (13) (2024)
Brian S White, Xing Yi Woo, Soner Koc, Todd Sheridan, Steven B Neuhauser, Shidan Wang, Yvonne A Evrard, Li Chen, Ali Foroughi Pour, John D Landua, R Jay Mashl, Sherri R Davies, Bingliang Fang, Maria Gabriela Raso, Kurt W Evans, Matthew H Bailey, Yeqing Chen, Min Xiao, Jill C Rubinstein, Brian J Sanderson, Michael W Lloyd, Sergii Domanskyi, Lacey Elizabeth Dobrolecki, Maihi Fujita, Junya Fujimoto, Guanghua Xiao, Ryan C Fields, Jacqueline L Mudd, George X Xu, Melinda G Hollingshead, Shahanawaz Jiwani, Saul Acevedo, null null, Brandi N Davis-Dusenbery, Peter Nick Robinson, Jeffrey A Moscow, James H Doroshow, Nicholas Mitsiades, Salma Kaochar, Chong-Xian Pan, Luis G Carvajal Carmona, Alana L Welm, Bryan E Welm, Ramaswamy Govindan, Shunqiang Li, Michael A Davies, Jack A Roth, Funda Meric-Bernstam, Yang Xie, Meenhard Herylyn, Li Ding, Michael T Lewis, Carol J Bult, Dennis A Dean, Jeffrey H Chuang
A Pan-Cancer Patient-Derived Xenograft Histology Image Repository with Genomic and Pathologic Annotations Enables Deep Learning Analysis. Cancer research 84 (13) (2024)
Shijia Zhu, Naoto Kubota, Shidan Wang, Tao Wang, Guanghua Xiao, Yujin Hoshida
STIE: Single-cell level deconvolution, convolution, and clustering in in situ capturing-based spatial transcriptomics. Nature communications 15 (1) (2024)
Ling Cai, Ralph J DeBerardinis, Xiaowei Zhan, Guanghua Xiao, Yang Xie
Navigating electronic health record accuracy by examination of sex incongruent conditions. Journal of the American Medical Informatics Association : JAMIA (2024)
Shidan Wang, Ruichen Rong, Qin Zhou, Donghan M Yang, Xinyi Zhang, Xiaowei Zhan, Justin Bishop, Zhikai Chi, Clare J Wilhelm, Siyuan Zhang, Curtis R Pickering, Mark G Kris, John D Minna, Yang Xie, Guanghua Xiao
Deep learning of cell spatial organizations identifies clinically relevant insights in tissue images. Nature communications 14 (1) (2023)
Xinyi Zhang, Frederico Omar Gleber-Netto, Shidan Wang, Roberta Rayra Martins-Chaves, Ricardo Santiago Gomez, Nadarajah Vigneswaran, Arunangshu Sarkar, William N William, Vassiliki Papadimitrakopoulou, Michelle Williams, Diana Bell, Doreen Palsgrove, Justin Bishop, John V Heymach, Ann M Gillenwater, Jeffrey N Myers, Renata Ferrarotto, Scott M Lippman, Curtis Rg Pickering, Guanghua Xiao
Deep learning-based pathology image analysis predicts cancer progression risk in patients with oral leukoplakia. Cancer medicine (2023)
Xinyi Zhang, Frederico Omar Gleber-Netto, Shidan Wang, Roberta Rayra Martins-Chaves, Ricardo Santiago Gomez, Nadarajah Vigneswaran, Arunangshu Sarkar, William N William, Vassiliki Papadimitrakopoulou, Michelle Williams, Diana Bell, Doreen Palsgrove, Justin Bishop, John V Heymach, Ann M Gillenwater, Jeffrey N Myers, Renata Ferrarotto, Scott M Lippman, Curtis Rg Pickering, Guanghua Xiao
Deep learning-based pathology image analysis predicts cancer progression risk in patients with oral leukoplakia. Cancer medicine (2023)
Ling Cai, Ralph J DeBerardinis, Yang Xie, John D Minna, Guanghua Xiao
A comparative study of neuroendocrine heterogeneity in small cell lung cancer and neuroblastoma. Molecular cancer research : MCR (2023)
Ling Cai, Ralph J DeBerardinis, Yang Xie, John D Minna, Guanghua Xiao
A Comparative Study of Neuroendocrine Heterogeneity in Small Cell Lung Cancer and Neuroblastoma. Molecular cancer research : MCR (2023)
Shidan Wang, Ruichen Rong, Donghan M Yang, Junya Fujimoto, Shirley Yan, Ling Cai, Danni Luo, Carmen Behrens, Edwin Roger Parra Cuentes, Bo Yao, Lin Xu, Xiaowei Zhan, Ignacio I Wistuba, John Minna, Yang Xie, Guanghua Xiao
Computational Staining of Pathology Images to Study the Tumor Microenvironment in Lung Cancer. Cancer research 80 (10) (2020)
Jiwoong Kim, David E Greenberg, Reed Pifer, Shuang Jiang, Guanghua Xiao, Samuel A Shelburne, Andrew Y Koh, Yang Xie, Xiaowei Zhan
VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning. PLoS computational biology 16 (1) (2020)
Minzhe Zhang, Qiwei Li, Donghyeon Yu, Bo Yao, Wei Guo, Yang Xie, Guanghua Xiao
GeNeCK: a web server for gene network construction and visualization. BMC bioinformatics 20 (1) (2019)
Yang Xie, Wei Lu, Shidan Wang, Ximing Tang, Hao Tang, Yunyun Zhou, Cesar Moran, Carmen Behrens, Jack A Roth, Qinghua Zhou, David H Johnson, Stephen G Swisher, John Victor Heymach, Vassiliki A Papadimitrakopoulou, Guanghua Xiao, John D Minna, Ignacio I Wistuba
Validation of the 12-gene Predictive Signature for Adjuvant Chemotherapy Response in Lung Cancer. Clinical cancer research : an official journal of the American Association for Cancer Research 25 (1) (2018)
Faliu Yi, Lin Yang, Shidan Wang, Lei Guo, Chenglong Huang, Yang Xie, Guanghua Xiao
Microvessel prediction in H&E Stained Pathology Images using fully convolutional neural networks. BMC bioinformatics 19 (1) (2018)
Donghyeon Yu, Johan Lim, Xinlei Wang, Faming Liang, Guanghua Xiao
Enhanced construction of gene regulatory networks using hub gene information. BMC bioinformatics 18 (1) (2017)
Gaoxiang Jia, Xinlei Wang, Guanghua Xiao
A permutation-based non-parametric analysis of CRISPR screen data. BMC genomics 18 (1) (2017)