Shuobo Shi

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 45

Top Topics

Saccharomyces Cerevisiae

Top Venues

Biotechnology and bioengineering

ACS synthetic biology

Microbiology resource announcements

Journal of agricultural and food chemistry

This page only lists publications with an associated author ORCID identifier.

Publications

Yujing Guo, Guang Cai, Huiying Li, Zhenquan Lin, Shuobo Shi, Jin Jin, Zihe Liu
A CRISPR-Cas9-Mediated Large-Fragment Assembly Method for Cloning Genomes and Biosynthetic Gene Cluster. Microorganisms 12 (7) (2024)
Shijie Xu, Jie Meng, Qi Zhang, Baisong Tong, Zihe Liu, Jinyu Fu, Shuobo Shi
CILF: CRISPR/Cas9 based integration of large DNA fragments in Saccharomyces cerevisiae. Biotechnology and bioengineering (2024)
Ning Qin, Lingyun Li, Xiaozhen Wan, Xu Ji, Yu Chen, Chaokun Li, Ping Liu, Yijie Zhang, Weijie Yang, Junfeng Jiang, Jian-Ye Xia, Shuobo Shi, Tianwei Tan, Jens B Nielsen, Yun Chen, Zihe Liu
Increased CO 2 fixation enables high carbon-yield production of 3-hydroxypropionic acid in yeast. Nature communications 15 (1) (2024)
Xiao Guo, Zhenzhen Bai, Huimin Zhao, Shuobo Shi
Development of a multigene expression system using 2A peptides in Rhodosporidium toruloides. Biotechnology and bioengineering (2024)
Yujing Guo, Guang Cai, Huiying Li, Zhenquan Lin, Shuobo Shi, Jin Jin, Zihe Liu
A CRISPR-Cas9-Mediated Large-Fragment Assembly Method for Cloning Genomes and Biosynthetic Gene Cluster. Microorganisms 12 (7) (2024)
Ning Qin, Lingyun Li, Xiaozhen Wan, Xu Ji, Yu Chen, Chaokun Li, Ping Liu, Yijie Zhang, Weijie Yang, Junfeng Jiang, Jian-Ye Xia, Shuobo Shi, Tianwei Tan, Jens B Nielsen, Yun Chen, Zihe Liu
Increased CO 2 fixation enables high carbon-yield production of 3-hydroxypropionic acid in yeast. Nature communications 15 (1) (2024)
Yujing Guo, Guang Cai, Huiying Li, Zhenquan Lin, Shuobo Shi, Jin Jin, Zihe Liu
A CRISPR-Cas9-Mediated Large-Fragment Assembly Method for Cloning Genomes and Biosynthetic Gene Cluster. Microorganisms 12 (7) (2024)
Ning Qin, Lingyun Li, Xiaozhen Wan, Xu Ji, Yu Chen, Chaokun Li, Ping Liu, Yijie Zhang, Weijie Yang, Junfeng Jiang, Jian-Ye Xia, Shuobo Shi, Tianwei Tan, Jens B Nielsen, Yun Chen, Zihe Liu
Increased CO 2 fixation enables high carbon-yield production of 3-hydroxypropionic acid in yeast. Nature communications 15 (1) (2024)
Shijie Xu, Weibo Qiao, Zuanwen Wang, Xiaoying Fu, Zihe Liu, Shuobo Shi
Exploiting a heterologous construction of the 3-hydroxypropionic acid carbon fixation pathway with mesaconate as an indicator in Saccharomyces cerevisiae. Bioresources and bioprocessing 10 (1) (2023)
Xiao Guo, Zhenzhen Bai, Yang Zhang, Huimin Zhao, Shuobo Shi
Mining and application of constitutive promoters from Rhodosporidium toruloides. AMB Express 13 (1) (2023)
Xiao Guo, Shuobo Shi
De Novo Genome Sequencing and Assembly of Rhodosporidium toruloides Strain Δdao1e. Microbiology resource announcements 12 (2) (2023)
Xiao Guo, Shuobo Shi
De Novo Genome Sequencing and Assembly of Rhodosporidium toruloides Strain Δdao1e. Microbiology resource announcements 12 (2) (2023)
Jinyu Fu, Linghao Zhang, Yanlin Long, Zihe Liu, Geng Meng, Huimin Zhao, Xin Su, Shuobo Shi
Multiplexed CRISPR-Based Nucleic Acid Detection Using a Single Cas Protein. Analytical chemistry (2023)
Genlai Dong, Shijie Xu, Shuobo Shi
De Novo Biosynthesis of Free Vaccenic Acid with a Low Content of Oleic Acid in Saccharomyces cerevisiae . Journal of agricultural and food chemistry (2023)
Xiao Guo, Zhenzhen Bai, Yang Zhang, Huimin Zhao, Shuobo Shi
Mining and application of constitutive promoters from Rhodosporidium toruloides. AMB Express 13 (1) (2023)
Shijie Xu, Weibo Qiao, Zuanwen Wang, Xiaoying Fu, Zihe Liu, Shuobo Shi
Exploiting a heterologous construction of the 3-hydroxypropionic acid carbon fixation pathway with mesaconate as an indicator in Saccharomyces cerevisiae. Bioresources and bioprocessing 10 (1) (2023)
Xiao Guo, Shuobo Shi
De Novo Genome Sequencing and Assembly of Rhodosporidium toruloides Strain Δdao1e. Microbiology resource announcements (2023)
Xiao Guo, Shuobo Shi
De Novo Genome Sequencing and Assembly of Rhodosporidium toruloides Strain Δdao1e. Microbiology resource announcements 12 (2) (2023)
Xiao Guo, Zhenzhen Bai, Yang Zhang, Huimin Zhao, Shuobo Shi
Mining and application of constitutive promoters from Rhodosporidium toruloides. AMB Express 13 (1) (2023)
Yi Yu, Shuobo Shi
Development and Perspective of Rhodotorula toruloides as an Efficient Cell Factory. Journal of agricultural and food chemistry 71 (4) (2023)
Jie Meng, Yue Qiu, Yueping Zhang, Huimin Zhao, Shuobo Shi
CMI: CRISPR/Cas9 Based Efficient Multiplexed Integration in Saccharomyces cerevisiae . ACS synthetic biology (2023)
Yi Yu, Shuobo Shi
Development and Perspective of Rhodotorula toruloides as an Efficient Cell Factory. Journal of agricultural and food chemistry (2023)
Juan Octavio Valle-Rodríguez, Verena Siewers, Jens Nielsen, Shuobo Shi
Directed evolution of a wax ester synthase for production of fatty acid ethyl esters in Saccharomyces cerevisiae. Applied microbiology and biotechnology (2023)
Yi Yu, Shuobo Shi
Development and Perspective of Rhodotorula toruloides as an Efficient Cell Factory. Journal of agricultural and food chemistry 71 (4) (2023)
Qun Yue, Jie Meng, Yue Qiu, Miaomiao Yin, Liwen Zhang, Weiping Zhou, Zhiqiang An, Zihe Liu, Qipeng Yuan, Wentao Sun, Chun Li, Huimin Zhao, István Molnár, Yuquan Xu, Shuobo Shi
A polycistronic system for multiplexed and precalibrated expression of multigene pathways in fungi. Nature communications 14 (1) (2023)
Weibo Qiao, Genlai Dong, Shijie Xu, Lingyun Li, Shuobo Shi
Engineering propionyl-CoA pools for de novo biosynthesis of odd-chain fatty acids in microbial cell factories. Critical reviews in biotechnology (2022)
Faying Zhang, Xian Fan, Ke Xu, Shihui Wang, Shuobo Shi, Li Yi, Guimin Zhang
Development of a Bacterial FhuD-Lysozyme-SsrA Mediated Autolytic (FLSA) System for Effective Release of Intracellular Products. ACS synthetic biology 12 (1) (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering (2022)
Wentao Ding, Qiongyu Meng, Genlai Dong, Nailing Qi, Huimin Zhao, Shuobo Shi
Metabolic engineering of threonine catabolism enables Saccharomyces cerevisiae to produce propionate under aerobic conditions. Biotechnology journal 17 (3) (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering 120 (4) (2022)
Faying Zhang, Xian Fan, Ke Xu, Shihui Wang, Shuobo Shi, Li Yi, Guimin Zhang
Development of a Bacterial FhuD-Lysozyme-SsrA Mediated Autolytic (FLSA) System for Effective Release of Intracellular Products. ACS synthetic biology 12 (1) (2022)
Nailing Qi, Wentao Ding, Genlai Dong, Zhihui Wang, Shuobo Shi
De novo bio-production of odd-chain fatty acids in Saccharomyces cerevisiae through a synthetic pathway via 3-hydroxypropionic acid. Biotechnology and bioengineering (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering 120 (4) (2022)
Faying Zhang, Xian Fan, Ke Xu, Shihui Wang, Shuobo Shi, Li Yi, Guimin Zhang
Development of a Bacterial FhuD-Lysozyme-SsrA Mediated Autolytic (FLSA) System for Effective Release of Intracellular Products. ACS synthetic biology 12 (1) (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering 120 (4) (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering 120 (4) (2022)
Faying Zhang, Xian Fan, Ke Xu, Shihui Wang, Shuobo Shi, Li Yi, Guimin Zhang
Development of a Bacterial FhuD-Lysozyme-SsrA Mediated Autolytic (FLSA) System for Effective Release of Intracellular Products. ACS synthetic biology (2022)
Liyang Wang, Jinyu Fu, Guang Cai, Xiyu Cheng, Di Zhang, Shuobo Shi, Yueping Zhang
Rapid and Visual RPA-Cas12a Fluorescence Assay for Accurate Detection of Dermatophytes in Cats and Dogs. Biosensors 12 (8) (2022)
Ning Qin, Lingyun Li, Zheng Wang, Shuobo Shi
Microbial production of odd-chain fatty acids. Biotechnology and bioengineering (2022)
Faying Zhang, Xian Fan, Ke Xu, Shihui Wang, Shuobo Shi, Li Yi, Guimin Zhang
Development of a Bacterial FhuD-Lysozyme-SsrA Mediated Autolytic (FLSA) System for Effective Release of Intracellular Products. ACS synthetic biology 12 (1) (2022)
Yang Zhang, Jie Peng, Huimin Zhao, Shuobo Shi
Engineering oleaginous yeast Rhodotorula toruloides for overproduction of fatty acid ethyl esters. Biotechnology for biofuels 14 (1) (2021)
Jinyu Fu, Yueping Zhang, Guang Cai, Geng Meng, Shuobo Shi
Rapid and sensitive RPA-Cas12a-fluorescence assay for point-of-care detection of African swine fever virus. PloS one 16 (7) (2021)
Guiping Gong, Yueping Zhang, Zibai Wang, Luo Liu, Shuobo Shi, Verena Siewers, Qipeng Yuan, Jens Nielsen, Xu Zhang, Zihe Liu
GTR 2.0: gRNA-tRNA Array and Cas9-NG Based Genome Disruption and Single-Nucleotide Conversion in Saccharomyces cerevisiae. ACS synthetic biology 10 (6) (2021)
Jinyu Fu, Junjie Li, Jing Chen, Yabei Li, Jiajia Liu, Xin Su, Shuobo Shi
Ultra-specific nucleic acid testing by target-activated nucleases. Critical reviews in biotechnology (2021)
Yang Zhang, Wentao Ding, Zhihui Wang, Huimin Zhao, Shuobo Shi
Development of Host-Orthogonal Genetic Systems for Synthetic Biology. Advanced biology 5 (3) (2021)