Sigrid C J De Keersmaecker (Sigrid C J de Keersmaecker)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 30

Top Topics

Antimicrobial Resistance

Top Venues

Foods (Basel, Switzerland)

Life (Basel, Switzerland)

Scientific data

This page only lists publications with an associated author ORCID identifier.

Publications

Alexander Van Uffelen, Andrés Posadas, Nancy H C Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker, Kevin Vanneste
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities. Scientific data 11 (1) (2024)
Alexander Van Uffelen, Andrés Posadas, Nancy H C Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker, Kevin Vanneste
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities. Scientific data 11 (1) (2024)
Alexander Van Uffelen, Andrés Posadas, Nancy H C Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker, Kevin Vanneste
Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities. Scientific data 11 (1) (2024)
Marie-Alice Fraiture, Jolien D'aes, Emmanuel Guiderdoni, Anne-Cécile Meunier, Thomas Delcourt, Stefan Hoffman, Els Vandermassen, Sigrid C J De Keersmaecker, Kevin Vanneste, Nancy H C J Roosens
Targeted High-Throughput Sequencing Enables the Detection of Single Nucleotide Variations in CRISPR/Cas9 Gene-Edited Organisms. Foods (Basel, Switzerland) 12 (3) (2023)
Carine Laurence Yehouenou, Bert Bogaerts, Kevin Vanneste, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Arsène A Kpangon, Dissou Affolabi, Anne Simon, Francis Moise Dossou, Olivia Dalleur
Whole-Genome Sequencing-Based Screening of MRSA in Patients and Healthcare Workers in Public Hospitals in Benin. Microorganisms 11 (8) (2023)
Marie-Alice Fraiture, Jolien D'aes, Emmanuel Guiderdoni, Anne-Cécile Meunier, Thomas Delcourt, Stefan Hoffman, Els Vandermassen, Sigrid C J De Keersmaecker, Kevin Vanneste, Nancy H C J Roosens
Targeted High-Throughput Sequencing Enables the Detection of Single Nucleotide Variations in CRISPR/Cas9 Gene-Edited Organisms. Foods (Basel, Switzerland) 12 (3) (2023)
Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kevin Vanneste
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products. Life (Basel, Switzerland) 12 (12) (2022)
Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kevin Vanneste
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products. Life (Basel, Switzerland) 12 (12) (2022)
Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kevin Vanneste
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products. Life (Basel, Switzerland) 12 (12) (2022)
Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kevin Vanneste
Metagenomic Characterization of Multiple Genetically Modified Bacillus Contaminations in Commercial Microbial Fermentation Products. Life (Basel, Switzerland) 12 (12) (2022)
Florence E Buytaers, Bavo Verhaegen, Mathieu Gand, Jolien D'aes, Kevin Vanneste, Nancy H C J Roosens, Kathleen Marchal, Sarah Denayer, Sigrid C J De Keersmaecker
Metagenomics to Detect and Characterize Viruses in Food Samples at Genome Level? Lessons Learnt from a Norovirus Study. Foods (Basel, Switzerland) 11 (21) (2022)
Sarah J D Nauwelaerts, Koen De Cremer, Natalia Bustos Sierra, Mathieu Gand, Dirk Van Geel, Maud Delvoye, Els Vandermassen, Jordy Vercauteren, Christophe Stroobants, Alfred Bernard, Nelly D Saenen, Tim S Nawrot, Nancy H C J Roosens, Sigrid C J De Keersmaecker
Assessment of the Feasibility of a Future Integrated Larger-Scale Epidemiological Study to Evaluate Health Risks of Air Pollution Episodes in Children. International journal of environmental research and public health 19 (14) (2022)
Claudia E Coipan, Therese Westrell, Angela H A M van Hoek, Erik Alm, Saara Kotila, Bas Berbers, Sigrid C J De Keersmaecker, Pieter-Jan Ceyssens, Maria Louise Borg, Marie Anne Chattaway, Jacquelyn McCormick, Timothy J Dallman, Eelco Franz
Genomic epidemiology of emerging ESBL-producing Salmonella Kentucky bla CTX-M-14b in Europe. Emerging microbes & infections 9 (1) (2021)
Mathieu Gand, Kevin Vanneste, Isabelle Thomas, Steven Van Gucht, Arnaud Capron, Philippe Herman, Nancy H C J Roosens, Sigrid C J De Keersmaecker
Deepening of In Silico Evaluation of SARS-CoV-2 Detection RT-qPCR Assays in the Context of New Variants. Genes 12 (4) (2021)
Jolien D'aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kevin Vanneste
Characterization of Genetically Modified Microorganisms Using Short- and Long-Read Whole-Genome Sequencing Reveals Contaminations of Related Origin in Multiple Commercial Food Enzyme Products. Foods (Basel, Switzerland) 10 (11) (2021)
Laura A E Van Poelvoorde, Mathieu Gand, Marie-Alice Fraiture, Sigrid C J De Keersmaecker, Bavo Verhaegen, Koenraad Van Hoorde, Ann Brigitte Cay, Nadège Balmelle, Philippe Herman, Nancy H C J Roosens
Strategy to Develop and Evaluate a Multiplex RT-ddPCR in Response to SARS-CoV-2 Genomic Evolution. Current issues in molecular biology 43 (3) (2021)
Karine Soetaert, Pieter-Jan Ceyssens, Samira Boarbi, Bert Bogaerts, Thomas Delcourt, Kevin Vanneste, Sigrid C J De Keersmaecker, Nancy H C Roosens, Alexandra Vodolazkaia, Marina Mukovnikova, Vanessa Mathys
Retrospective evaluation of routine whole genome sequencing of Mycobacterium tuberculosis at the Belgian National Reference Center, 2019. Acta clinica Belgica (2021)
Bert Bogaerts, Raf Winand, Julien Van Braekel, Wesley Mattheus, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Kathleen Marchal, Kevin Vanneste, Pieter-Jan Ceyssens
Phylogenomic Investigation of Increasing Fluoroquinolone Resistance among Belgian Cases of Shigellosis between 2013 and 2018 Indicates Both Travel-Related Imports and Domestic Circulation. Microorganisms 9 (4) (2021)
Assia Saltykova, Florence E Buytaers, Sarah Denayer, Bavo Verhaegen, Denis Piérard, Nancy H C J Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker
Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as a Case Study. International journal of molecular sciences 21 (16) (2020)
Marie-Alice Fraiture, Bert Bogaerts, Raf Winand, Marie Deckers, Nina Papazova, Kevin Vanneste, Sigrid C J De Keersmaecker, Nancy H C Roosens
Identification of an unauthorized genetically modified bacteria in food enzyme through whole-genome sequencing. Scientific reports 10 (1) (2020)
Sarah J D Nauwelaerts, Nancy H C Roosens, Koen De Cremer, Alfred Bernard, Sigrid C J De Keersmaecker
Gender-dependent association between exhaled nitric oxide and the CC16 38AA genotype in young school children. Immunity, inflammation and disease 8 (4) (2020)
Mathieu Gand, Kevin Vanneste, Isabelle Thomas, Steven Van Gucht, Arnaud Capron, Philippe Herman, Nancy H C J Roosens, Sigrid C J De Keersmaecker
Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection. International journal of molecular sciences 21 (15) (2020)
Stéphanie Nouws, Bert Bogaerts, Bavo Verhaegen, Sarah Denayer, Florence Crombé, Klara De Rauw, Denis Piérard, Kathleen Marchal, Kevin Vanneste, Nancy H C J Roosens, Sigrid C J De Keersmaecker
The Benefits of Whole Genome Sequencing for Foodborne Outbreak Investigation from the Perspective of a National Reference Laboratory in a Smaller Country. Foods (Basel, Switzerland) 9 (8) (2020)
Thomas Delcourt, Kevin Vanneste, Mohamed Rida Soumali, Wim Coucke, Vanessa Ghislain, Aline Hebrant, Els Van Valckenborgh, Sigrid C J De Keersmaecker, Nancy H C J Roosens, Philippe Van De Walle, Marc Van Den Bulcke, Aline Antoniou
NGS for (Hemato-) Oncology in Belgium: Evaluation of Laboratory Performance and Feasibility of a National External Quality Assessment Program. Cancers 12 (11) (2020)
Bas Berbers, Assia Saltykova, Cristina Garcia-Graells, Patrick Philipp, Fabrice Arella, Kathleen Marchal, Raf Winand, Kevin Vanneste, Nancy H C Roosens, Sigrid C J De Keersmaecker
Combining short and long read sequencing to characterize antimicrobial resistance genes on plasmids applied to an unauthorized genetically modified Bacillus. Scientific reports 10 (1) (2020)
Florence E Buytaers, Assia Saltykova, Sarah Denayer, Bavo Verhaegen, Kevin Vanneste, Nancy H C J Roosens, Denis Piérard, Kathleen Marchal, Sigrid C J De Keersmaecker
A Practical Method to Implement Strain-Level Metagenomics-Based Foodborne Outbreak Investigation and Source Tracking in Routine. Microorganisms 8 (8) (2020)
Bas Berbers, Pieter-Jan Ceyssens, Pierre Bogaerts, Kevin Vanneste, Nancy H C J Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker
Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination. Antibiotics (Basel, Switzerland) 9 (8) (2020)
Xavier Libert, Camille Chasseur, Ann Packeu, Fabrice Bureau, Nancy H Roosens, Sigrid C J De Keersmaecker
Exploiting the Advantages of Molecular Tools for the Monitoring of Fungal Indoor Air Contamination: First Detection of Exophiala jeanselmei in Indoor Air of Air-Conditioned Offices. Microorganisms 7 (12) (2019)
Assia Saltykova, Véronique Wuyts, Wesley Mattheus, Sophie Bertrand, Nancy H C Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker
Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:. PloS one 13 (2) (2018)
Xavier Libert, Ann Packeu, Fabrice Bureau, Nancy H Roosens, Sigrid C J De Keersmaecker
Development and performance assessment of a luminex xMAP® direct hybridization assay for the detection and identification of indoor air fungal contamination. PloS one 12 (3) (2017)