Sridhar Hannenhalli

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 21

Top Topics

Genome Wide Association

Gene Expression

Top Venues

Science advances

Nature communications

PLoS computational biology

This page only lists publications with an associated author ORCID identifier.

Publications

Yingying Cao, Tian-Gen Chang, Fiorella Schischlik, Wang Kun, Sanju Sinha, Sridhar Hannenhalli, Peng Jiang, Eytan Ruppin
Inferring characteristics of the tumor-immune microenvironment of HNSCC patients from single-cell transcriptomics of peripheral blood. Cancer research communications (2024)
Shan Li, Sridhar Hannenhalli, Ivan Ovcharenko
De novo human brain enhancers created by single-nucleotide mutations. Science advances 9 (7) (2023)
Vishaka Gopalan, Sridhar Hannenhalli
Towards a Synthesis of the Non-Genetic and Genetic Views of Cancer in Understanding Pancreatic Ductal Adenocarcinoma Initiation and Prevention. Cancers 15 (7) (2023)
Shan Li, Sridhar Hannenhalli, Ivan Ovcharenko
De novo human brain enhancers created by single-nucleotide mutations. Science advances 9 (7) (2023)
Piyush Agrawal, Navami Jain, Vishaka Gopalan, Annan Timon, Arashdeep Singh, Padma S Rajagopal, Sridhar Hannenhalli
Network-based approach elucidates critical genes in BRCA subtypes and chemotherapy response in Triple Negative Breast Cancer. bioRxiv : the preprint server for biology (2023)
Shan Li, Sridhar Hannenhalli, Ivan Ovcharenko
De novo human brain enhancers created by single-nucleotide mutations. Science advances 9 (7) (2023)
Shan Li, Sridhar Hannenhalli, Ivan Ovcharenko
De novo human brain enhancers created by single-nucleotide mutations. Science advances 9 (7) (2023)
Piyush Agrawal, Narmada Sambaturu, Gulden Olgun, Sridhar Hannenhalli
A path-based analysis of infected cell line and COVID-19 patient transcriptome reveals novel potential targets and drugs against SARS-CoV-2. Research square (2022)
Arashdeep Singh, Arati Rajeevan, Vishaka Gopalan, Piyush Agrawal, Chi-Ping Day, Sridhar Hannenhalli
Broad misappropriation of developmental splicing profile by cancer in multiple organs. Nature communications 13 (1) (2022)
Arashdeep Singh, Arati Rajeevan, Vishaka Gopalan, Piyush Agrawal, Chi-Ping Day, Sridhar Hannenhalli
Broad misappropriation of developmental splicing profile by cancer in multiple organs. Nature communications 13 (1) (2022)
Arashdeep Singh, Arati Rajeevan, Vishaka Gopalan, Piyush Agrawal, Chi-Ping Day, Sridhar Hannenhalli
Broad misappropriation of developmental splicing profile by cancer in multiple organs. Nature communications 13 (1) (2022)
Arashdeep Singh, Arati Rajeevan, Vishaka Gopalan, Piyush Agrawal, Chi-Ping Day, Sridhar Hannenhalli
Broad misappropriation of developmental splicing profile by cancer in multiple organs. Nature communications 13 (1) (2022)
Nishanth Ulhas Nair, Kuoyuan Cheng, Lamis Naddaf, Elad Sharon, Lipika R Pal, Padma Sheila Rajagopal, Irene Unterman, Kenneth D Aldape, Sridhar Hannenhalli, Chi-Ping Day, Yuval Tabach, Eytan Ruppin
Cross-species identification of cancer resistance-associated genes that may mediate human cancer risk. Science advances 8 (31) (2022)
Arashdeep Singh, Arati Rajeevan, Vishaka Gopalan, Piyush Agrawal, Chi-Ping Day, Sridhar Hannenhalli
Broad misappropriation of developmental splicing profile by cancer in multiple organs. Nature communications 13 (1) (2022)
Mahashweta Basu, Wang Kun, Eytan Ruppin, Sridhar Hannenhalli
Predicting tissue-specific gene expression from whole blood transcriptome. Science advances 7 (14) (2021)
Vishaka Gopalan, Arashdeep Singh, Farid Rashidi Mehrabadi, Li Wang, Eytan Ruppin, H Efsun Arda, Sridhar Hannenhalli
A Transcriptionally Distinct Subpopulation of Healthy Acinar Cells Exhibit Features of Pancreatic Progenitors and PDAC. Cancer research 81 (15) (2021)
Gowthami Somepalli, Sarthak Sahoo, Arashdeep Singh, Sridhar Hannenhalli
Prioritizing and characterizing functionally relevant genes across human tissues. PLoS computational biology 17 (7) (2021)
Wang Kun, Mahashweta Basu, Justin Malin, Sridhar Hannenhalli
A transcription-centric model of SNP-age interaction. PLoS genetics 17 (3) (2021)
Bharath Saravanan, Deepanshu Soota, Zubairul Islam, Sudeshna Majumdar, Rajat Mann, Sweety Meel, Umer Farooq, Kaivalya Walavalkar, Srimonta Gayen, Anurag Kumar Singh, Sridhar Hannenhalli, Dimple Notani
Ligand dependent gene regulation by transient ERα clustered enhancers. PLoS genetics 16 (1) (2020)
Mahashweta Basu, Mahfuza Sharmin, Avinash Das, Nishanth Ulhas Nair, Kun Wang, Joo Sang Lee, Yen-Pei Christy Chang, Eytan Ruppin, Sridhar Hannenhalli
Prediction and Subtyping of Hypertension from Pan-Tissue Transcriptomic and Genetic Analyses. Genetics 207 (3) (2017)
Sushant Patkar, Assaf Magen, Roded Sharan, Sridhar Hannenhalli
A network diffusion approach to inferring sample-specific function reveals functional changes associated with breast cancer. PLoS computational biology 13 (11) (2017)