Kenneth D Aldape (Kenneth Aldape)

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 90

Top Topics

Dna Methylation

Gene Expression

Top Venues

Nature communications

Journal of neuropathology and experimental neurology

Cancer research

This page only lists publications with an associated author ORCID identifier.

Publications

Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Justin Z Wang, Vikas Patil, Alexander P Landry, Chloe Gui, Andrew Ajisebutu, Jeff Liu, Olli Saarela, Stephanie L Pugh, Minhee Won, Zeel Patel, Rebeca Yakubov, Ramneet Kaloti, Christopher Wilson, Aaron Cohen-Gadol, Mohamed A Zaazoue, Ghazaleh Tabatabai, Marcos Tatagiba, Felix Behling, Damian A Almiron Bonnin, Eric C Holland, Tim J Kruser, Jill S Barnholtz-Sloan, Andrew E Sloan, Craig M Horbinski, Silky Chotai, Lola B Chambless, Andrew Gao, Alexander D Rebchuk, Serge Makarenko, Stephen Yip, Felix Sahm, Sybren L N Maas, Derek S Tsang, null null, C Leland Rogers, Kenneth D Aldape, Farshad Nassiri, Gelareh Zadeh
Molecular classification to refine surgical and radiotherapeutic decision-making in meningioma. Nature medicine (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response Rate and Molecular Correlates to Encorafenib and Binimetinib in BRAF-V600E Mutant High-Grade Glioma. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (10) (2024)
Nicole Briceno, Elizabeth Vera, Edina Komlodi-Pasztor, Zied Abdullaev, Anna Choi, Ewa Grajkowska, Tricia Kunst, Jason Levine, Matthew Lindsley, Kelly Fernandez, Jennifer Reyes, Lisa Boris, Eric Burton, Marissa Panzer, Lily Polskin, Marta Penas-Prado, Tina Pillai, Brett J Theeler, Jing Wu, Kathleen Wall, Antonios Papanicolau-Sengos, Martha Quezado, James Smirniotopoulos, Kenneth D Aldape, Terri S Armstrong, Mark R Gilbert
Long-term survivors of glioblastoma: Tumor molecular, clinical, and imaging findings. Neuro-oncology advances 6 (1) (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response Rate and Molecular Correlates to Encorafenib and Binimetinib in BRAF-V600E Mutant High-Grade Glioma. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (10) (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response rate and molecular correlates to encorafenib and binimetinib in BRAF-V600E mutant high-grade glioma. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
Danh-Tai Hoang, Gal Dinstag, Eldad David Shulman, Leandro C Hermida, Doreen S Ben-Zvi, Efrat Elis, Katherine Caley, Stephen-John Sammut, Sanju Sinha, Neelam Sinha, Christopher H Dampier, Chani Stossel, Tejas Patil, Arun Rajan, Wiem Lassoued, Julius Strauss, Shania Bailey, Clint T Allen, Jason Mark Redman, Tuvik Beker, Peng Jiang, Talia Golan, Scott Wilkinson, Adam G Sowalsky, Sharon R Pine, Carlos Caldas, James L Gulley, Kenneth D Aldape, Ranit Aharonov, Eric A Stone, Eytan Ruppin
A deep-learning framework to predict cancer treatment response from histopathology images through imputed transcriptomics. Nature cancer (2024)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Justin Z Wang, Alexander P Landry, David R Raleigh, Felix Sahm, Kyle M Walsh, Roland Goldbrunner, Leeor S Yefet, Jörg C Tonn, Chloe Gui, Quinn T Ostrom, Jill Barnholtz-Sloan, Arie Perry, Yosef Ellenbogen, C Oliver Hanemann, Gerhard Jungwirth, Michael D Jenkinson, Ghazaleh Tabatabai, Tiit I Mathiesen, Michael W McDermott, Marcos Tatagiba, Christian la Fougère, Sybren L N Maas, Norbert Galldiks, Nathalie L Albert, Priscilla K Brastianos, Felix Ehret, Giuseppe Minniti, Katrin Lamszus, Franz L Ricklefs, Cornelia Brendle, Katharine J Drummond, Ian F Dunn, Omar N Pathmanaban, Aaron Cohen-Gadol, Erik P Sulman, Emeline Tabouret, Emelie Le Rhun, Christian Mawrin, Jennifer Moliterno, Michael Weller, Wenya Linda Bi, Andrew Gao, Stephen Yip, Maximilian Niyazi, null null, Kenneth D Aldape, Patrick Y Wen, Susan Short, Matthias Preusser, Farshad Nassiri, Gelareh Zadeh
Meningioma: International Consortium on Meningiomas (ICOM) consensus review on scientific advances & treatment paradigms for clinicians, researchers, and patients. Neuro-oncology (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response Rate and Molecular Correlates to Encorafenib and Binimetinib in BRAF-V600E Mutant High-Grade Glioma. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (10) (2024)
Justin Z Wang, Vikas Patil, Alexander P Landry, Chloe Gui, Andrew Ajisebutu, Jeff Liu, Olli Saarela, Stephanie L Pugh, Minhee Won, Zeel Patel, Rebeca Yakubov, Ramneet Kaloti, Christopher Wilson, Aaron Cohen-Gadol, Mohamed A Zaazoue, Ghazaleh Tabatabai, Marcos Tatagiba, Felix Behling, Damian A Almiron Bonnin, Eric C Holland, Tim J Kruser, Jill S Barnholtz-Sloan, Andrew E Sloan, Craig M Horbinski, Silky Chotai, Lola B Chambless, Andrew Gao, Alexander D Rebchuk, Serge Makarenko, Stephen Yip, Felix Sahm, Sybren L N Maas, Derek S Tsang, null null, C Leland Rogers, Kenneth D Aldape, Farshad Nassiri, Gelareh Zadeh
Molecular classification to refine surgical and radiotherapeutic decision-making in meningioma. Nature medicine (2024)
Sanju Sinha, Rahulsimham Vegesna, Sumit Mukherjee, Ashwin V Kammula, Saugato Rahman Dhruba, Wei Wu, D Lucas Kerr, Nishanth Ulhas Nair, Matthew G Jones, Nir Yosef, Oleg V Stroganov, Ivan Grishagin, Kenneth D Aldape, Collin M Blakely, Peng Jiang, Craig J Thomas, Cyril H Benes, Trever G Bivona, Alejandro A Schäffer, Eytan Ruppin
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors. Nature cancer 5 (6) (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response Rate and Molecular Correlates to Encorafenib and Binimetinib in BRAF-V600E Mutant High-Grade Glioma. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (10) (2024)
Nicole Briceno, Elizabeth Vera, Edina Komlodi-Pasztor, Zied Abdullaev, Anna Choi, Ewa Grajkowska, Tricia Kunst, Jason Levine, Matthew Lindsley, Kelly Fernandez, Jennifer Reyes, Lisa Boris, Eric Burton, Marissa Panzer, Lily Polskin, Marta Penas-Prado, Tina Pillai, Brett J Theeler, Jing Wu, Kathleen Wall, Antonios Papanicolau-Sengos, Martha Quezado, James Smirniotopoulos, Kenneth D Aldape, Terri S Armstrong, Mark R Gilbert
Long-term survivors of glioblastoma: Tumor molecular, clinical, and imaging findings. Neuro-oncology advances 6 (1) (2024)
Andrew E Sloan, Kathryn Winter, Mark R Gilbert, Kenneth D Aldape, Serah Choi, Patrick Yung Wen, Nicholas Butowski, Fabio M Iwamoto, Raju R Raval, Alfredo D Voloschin, Carlos Kamiya-Matsuoka, Minhee Won, Minesh P Mehta
NRG-BN002: Phase I Study of Ipilimumab, Nivolumab, and the Combination in Patients with Newly Diagnosed GBM. Neuro-oncology (2024)
Fouad El-Dana, Kenneth D Aldape, Zied Abdullaev, Sameer Anil Sheth, Jacob Mandel, Hsiang-Chih Lu
Low-grade glial/glioneuronal tumor with YAP1::FAM118B fusion: A novel molecular finding. Journal of neuropathology and experimental neurology (2024)
Sanju Sinha, Rahulsimham Vegesna, Sumit Mukherjee, Ashwin V Kammula, Saugato Rahman Dhruba, Wei Wu, D Lucas Kerr, Nishanth Ulhas Nair, Matthew G Jones, Nir Yosef, Oleg V Stroganov, Ivan Grishagin, Kenneth D Aldape, Collin M Blakely, Peng Jiang, Craig J Thomas, Cyril H Benes, Trever G Bivona, Alejandro A Schäffer, Eytan Ruppin
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors. Nature cancer 5 (6) (2024)
Danh-Tai Hoang, Eldad David Shulman, Rust Turakulov, Zied Abdullaev, Omkar Singh, Emma M Campagnolo, H Lalchungnunga, Eric A Stone, Mac Lean P Nasrallah, Eytan Ruppin, Kenneth D Aldape
Prediction of DNA methylation-based tumor types from histopathology in central nervous system tumors with deep learning. Nature medicine (2024)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Zhichao Wu, Karen Dazelle, Zied Abdullaev, Hye-Jung Chung, Sonika Dahiya, Matthew Wood, Han Lee, Calixto-Hope G Lucas, Qinwen Mao, Lorraina Robinson, Igor Fernandes, Matthew McCord, Peter Pytel, Kyle S Conway, Rebecca Yoda, Jennifer M Eschbacher, Ossama M Maher, Martin Hasselblatt, Bret C Mobley, Jack M Raisanen, Kimmo J Hatanpaa, Joshua Byers, Norman L Lehman, Patrick J Cimino, Drew Pratt, Martha Quezado, Kenneth D Aldape
Papillary tumor of the pineal region: analysis of DNA methylation profiles and clinical outcomes in 76 cases. Acta neuropathologica communications 12 (1) (2024)
Regina Rose Reimann, Dorothee Gramatzki, Andrea Bink, Juergen Hench, Stephan Frank, Martina Haberecker, Hortobágyi Tibor, Kristof Egervari, Doron Merkler, Kenneth D Aldape, Michael Weller
Long survival in a patient with fumarate hydratase mutation-associated glioma. Journal of neuropathology and experimental neurology (2024)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Felipe Andreiuolo, Christina K Ferrone, Sharika Rajan, Arie Perry, Ekin Guney, Elaine Cham, Caterina Giannini, Angus Toland, Nicholas Willard, Andrea Silveira de Souza, Karen Dazelle, Hye-Jung Chung, Omkar Singh, Kyle Conway, Nicholas Coley, Christopher Dampier, Zied Abdullaev, Drew Pratt, Patrick J Cimino, Martha Quezado, Kenneth D Aldape
Molecular and clinicopathologic characteristics of CNS embryonal tumors with BRD4::LEUTX fusion. Acta neuropathologica communications 12 (1) (2024)
Danh-Tai Hoang, Gal Dinstag, Eldad David Shulman, Leandro C Hermida, Doreen S Ben-Zvi, Efrat Elis, Katherine Caley, Stephen-John Sammut, Sanju Sinha, Neelam Sinha, Christopher H Dampier, Chani Stossel, Tejas Patil, Arun Rajan, Wiem Lassoued, Julius Strauss, Shania Bailey, Clint T Allen, Jason Mark Redman, Tuvik Beker, Peng Jiang, Talia Golan, Scott Wilkinson, Adam G Sowalsky, Sharon R Pine, Carlos Caldas, James L Gulley, Kenneth D Aldape, Ranit Aharonov, Eric A Stone, Eytan Ruppin
A deep-learning framework to predict cancer treatment response from histopathology images through imputed transcriptomics. Nature cancer (2024)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Felipe Andreiuolo, Christina K Ferrone, Sharika Rajan, Arie Perry, Ekin Guney, Elaine Cham, Caterina Giannini, Angus Toland, Nicholas Willard, Andrea Silveira de Souza, Karen Dazelle, Hye-Jung Chung, Omkar Singh, Kyle Conway, Nicholas Coley, Christopher Dampier, Zied Abdullaev, Drew Pratt, Patrick J Cimino, Martha Quezado, Kenneth D Aldape
Molecular and clinicopathologic characteristics of CNS embryonal tumors with BRD4::LEUTX fusion. Acta neuropathologica communications 12 (1) (2024)
Nishanth Ulhas Nair, Alejandro A Schäffer, Edward Michael Gertz, Kuoyuan Cheng, Johanna Zerbib, Avinash Das Sahu, Gil Leor, Eldad David Shulman, Kenneth D Aldape, Uri Ben-David, Eytan Ruppin
Chromosome 7 gain compensates for chromosome 10 loss in glioma. Cancer research (2024)
Sanju Sinha, Rahulsimham Vegesna, Sumit Mukherjee, Ashwin V Kammula, Saugato Rahman Dhruba, Wei Wu, D Lucas Kerr, Nishanth Ulhas Nair, Matthew G Jones, Nir Yosef, Oleg V Stroganov, Ivan Grishagin, Kenneth D Aldape, Collin M Blakely, Peng Jiang, Craig J Thomas, Cyril H Benes, Trever G Bivona, Alejandro A Schäffer, Eytan Ruppin
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors. Nature cancer (2024)
M Adelita Vizcaino, Caterina Giannini, Daniel Lalich, Ali Nael, Robert B Jenkins, Quynh Tran, Brent A Orr, Zied Abdullaev, Kenneth D Aldape, Rachael Ann Vaubel
Ganglioglioma with anaplastic/high-grade transformation: Histopathologic, molecular, and epigenetic characterization of 3 cases. Journal of neuropathology and experimental neurology (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response rate and molecular correlates to encorafenib and binimetinib in BRAF-V600E mutant high-grade glioma. Clinical cancer research : an official journal of the American Association for Cancer Research (2024)
Kee Kiat Yeo, Cassie B Macrae, Bradley Gampel, Jared T Ahrendsen, Hart Lidov, Karen D Wright, Susan Chi, Katie Fehnel, Lissa Baird, Jessica Clymer, Kenneth D Aldape, Sanda Alexandrescu
Clinical utility of DNA methylation profiling for choroid plexus tumors. Neuro-oncology advances 6 (1) (2024)
Danh-Tai Hoang, Eldad David Shulman, Rust Turakulov, Zied Abdullaev, Omkar Singh, Emma M Campagnolo, H Lalchungnunga, Eric A Stone, Mac Lean P Nasrallah, Eytan Ruppin, Kenneth D Aldape
Prediction of DNA methylation-based tumor types from histopathology in central nervous system tumors with deep learning. Nature medicine 30 (7) (2024)
Felipe Andreiuolo, Christina K Ferrone, Sharika Rajan, Arie Perry, Ekin Guney, Elaine Cham, Caterina Giannini, Angus Toland, Nicholas Willard, Andrea Silveira de Souza, Karen Dazelle, Hye-Jung Chung, Omkar Singh, Kyle Conway, Nicholas Coley, Christopher Dampier, Zied Abdullaev, Drew Pratt, Patrick J Cimino, Martha Quezado, Kenneth D Aldape
Molecular and clinicopathologic characteristics of CNS embryonal tumors with BRD4::LEUTX fusion. Acta neuropathologica communications 12 (1) (2024)
Sanju Sinha, Rahulsimham Vegesna, Sumit Mukherjee, Ashwin V Kammula, Saugato Rahman Dhruba, Wei Wu, D Lucas Kerr, Nishanth Ulhas Nair, Matthew G Jones, Nir Yosef, Oleg V Stroganov, Ivan Grishagin, Kenneth D Aldape, Collin M Blakely, Peng Jiang, Craig J Thomas, Cyril H Benes, Trever G Bivona, Alejandro A Schäffer, Eytan Ruppin
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors. Nature cancer (2024)
Andrew E Sloan, Kathryn Winter, Mark R Gilbert, Kenneth D Aldape, Serah Choi, Patrick Yung Wen, Nicholas Butowski, Fabio M Iwamoto, Raju R Raval, Alfredo D Voloschin, Carlos Kamiya-Matsuoka, Minhee Won, Minesh P Mehta
NRG-BN002: Phase I Study of Ipilimumab, Nivolumab, and the Combination in Patients with Newly Diagnosed GBM. Neuro-oncology (2024)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, null null, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The Epigenetic Evolution of Glioma Is Determined by the IDH1 Mutation Status and Treatment Regimen. Cancer research 84 (5) (2024)
Zhichao Wu, Karen Dazelle, Zied Abdullaev, Hye-Jung Chung, Sonika Dahiya, Matthew Wood, Han Lee, Calixto-Hope G Lucas, Qinwen Mao, Lorraina Robinson, Igor Fernandes, Matthew McCord, Peter Pytel, Kyle S Conway, Rebecca Yoda, Jennifer M Eschbacher, Ossama M Maher, Martin Hasselblatt, Bret C Mobley, Jack M Raisanen, Kimmo J Hatanpaa, Joshua Byers, Norman L Lehman, Patrick J Cimino, Drew Pratt, Martha Quezado, Kenneth D Aldape
Papillary tumor of the pineal region: analysis of DNA methylation profiles and clinical outcomes in 76 cases. Acta neuropathologica communications 12 (1) (2024)
Kee Kiat Yeo, Cassie B Macrae, Bradley Gampel, Jared T Ahrendsen, Hart Lidov, Karen D Wright, Susan Chi, Katie Fehnel, Lissa Baird, Jessica Clymer, Kenneth D Aldape, Sanda Alexandrescu
Clinical utility of DNA methylation profiling for choroid plexus tumors. Neuro-oncology advances 6 (1) (2024)
Karisa C Schreck, Strowd Re, Louis Burt Nabors, Benjamin M Ellingson, Michael Chang, Sze Kiat Tan, Zied Abdullaev, Rust Turakulov, Kenneth D Aldape, Neeraja Danda, Serena Desideri, Joy Fisher, Michaella Iacoboni, Trisha Surakus, Michelle A Rudek, Chetan Bettegowda, Stuart A Grossman, Xiaobu Ye
Response Rate and Molecular Correlates to Encorafenib and Binimetinib in BRAF-V600E Mutant High-Grade Glioma. Clinical cancer research : an official journal of the American Association for Cancer Research 30 (10) (2024)
Danh-Tai Hoang, Eldad David Shulman, Rust Turakulov, Zied Abdullaev, Omkar Singh, Emma M Campagnolo, H Lalchungnunga, Eric A Stone, Mac Lean P Nasrallah, Eytan Ruppin, Kenneth D Aldape
Prediction of DNA methylation-based tumor types from histopathology in central nervous system tumors with deep learning. Nature medicine 30 (7) (2024)
Martin J van den Bent, Pim J French, Daniel J Brat, Joerg-Christian Tonn, Mehdi Touat, Benjamin M Ellingson, Robert J Young, Johan Pallud, Andreas von Deimling, Felix Sahm, Dominique Figarella Branger, Raymond Y Huang, Michael Weller, Ingo K Mellinghoff, Tim F Cloughsey, Jason T Huse, Kenneth D Aldape, Guido Reifenberger, Gilbert Youssef, Philipp Karschnia, Houtan Noushmehr, Katherine B Peters, Francois Ducray, Matthias Preusser, Patrick Yung Wen
The biological significance of tumor grade, age, enhancement and extent of resection in IDH mutant gliomas: how should they inform treatment decision in the era of IDH inhibitors? Invited review. Neuro-oncology (2024)
M Adelita Vizcaino, Caterina Giannini, Daniel Lalich, Ali Nael, Robert B Jenkins, Quynh Tran, Brent A Orr, Zied Abdullaev, Kenneth D Aldape, Rachael Ann Vaubel
Ganglioglioma with anaplastic/high-grade transformation: Histopathologic, molecular, and epigenetic characterization of 3 cases. Journal of neuropathology and experimental neurology 83 (6) (2024)
Shadin Ahmed, Mary Frances Wedekind Malone, Jaydira Del Rivero, Margarita Raygada, Robin Lockridge, John W Glod, Crystal Flowers, B J Thomas, Donna B Bernstein, Oxana B Kapustina, Ashish Jain, Markku M Miettinen, Mark Raffeld, Liqiang Xi, Manoj Tyagi, Jung Kim, Kenneth D Aldape, Ashkan A Malayeri, Rosandra N Kaplan, Taryn M Allen, Christina A Vivelo, Abby B Sandler, Brigitte C Widemann, Karlyne M Reilly
Longitudinal Natural History Study of Children and Adults with Rare Solid Tumors: Initial Results for First 200 Participants. Cancer research communications (2023)
Amir Nazem, Jonathan Lavezo, Zied Abdullaev, Kenneth D Aldape, Martha Quezado, Patrick Joseph Cimino, Drew W Pratt, Robert B Jenkins, Cristiane M Ida
Diffuse hemispheric glioma with H3-3B G34R mutation: Expanding the spectrum of histone H3 genes in diffuse hemispheric glioma, H3 G34-mutant. Journal of neuropathology and experimental neurology (2023)
Mac Lean P Nasrallah, Kenneth D Aldape
Molecular classification and grading of meningioma. Journal of neuro-oncology 161 (2) (2023)
Norman L Lehman, Nathalie Spassky, Müge Sak, Amy Webb, Cory T Zumbar, Aisulu Usubalieva, Khaled J Alkhateeb, Joseph P McElroy, Kirsteen H Maclean, Paola Fadda, Tom Liu, Vineela Gangalapudi, Jamie Carver, Zied Abdullaev, Cynthia Timmers, John R Parker, Christopher R Pierson, Bret C Mobley, Murat Gokden, Eyas M Hattab, Timothy Parrett, Ralph X Cooke, Trang D Lehman, Stefan Costinean, Anil Parwani, Brian J Williams, Randy L Jensen, Kenneth D Aldape, Akshitkumar M Mistry
Author Correction: Astroblastomas exhibit radial glia stem cell lineages and differential expression of imprinted and X-inactivation escape genes. Nature communications 14 (1) (2023)
Beibei Ru, Jinlin Huang, Yu Zhang, Kenneth D Aldape, Peng Jiang
Estimation of cell lineages in tumors from spatial transcriptomics data. Nature communications 14 (1) (2023)
Eytan Ruppin, Danh-Tai Hoang, Gal Dinstag, Leandro Hermida, Doreen S Ben-Zvi, Efrat Elis, Katherine Caley, Stephen-John Sammut, Sanju Sinha, Neelam Sinha, Christopher H Dampier, Chani Stossel, Tejas Patil, Arun Rajan, Wiem Lassoued, Julius Strauss, Shania Bailey, Clint T Allen, Jason Redman, Tuvik Beker, Peng Jiang, Talia Golan, Scott Wilkinson, Adam G Sowalsky, Sharon R Pine, Carlos Caldas, James L Gulley, Kenneth D Aldape, Ranit Aharonov, Eric Stone
Prediction of cancer treatment response from histopathology images through imputed transcriptomics. Research square (2023)
Maria A Gubbiotti, Mariarita Santi, Philip B Storm, Marilyn Li, Feng Xu, Zied Abdullaev, Kenneth D Aldape, Angela N Viaene
First-time identification of a KIF5B-NTRK2 fusion in extraventricular neurocytoma. Journal of neuropathology and experimental neurology 82 (3) (2023)
Farshad Nassiri, Vikas Patil, Leeor S Yefet, Olivia Singh, Jeff Liu, Rachel M A Dang, Takafumi N Yamaguchi, Mariza Daras, Timothy F Cloughesy, Howard Colman, Priya U Kumthekar, Clark C Chen, Robert Aiken, Morris D Groves, Shirley S Ong, Rohan Ramakrishna, Michael A Vogelbaum, Simon Khagi, Thomas Kaley, Jason M Melear, David M Peereboom, Analiz Rodriguez, Maxim Yankelevich, Suresh G Nair, Vinay K Puduvalli, Kenneth D Aldape, Andrew Gao, Álvaro López-Janeiro, Carlos E de Andrea, Marta Marija Alonso, Paul C Boutros, Joan Robbins, Warren P Mason, Adam M Sonabend, Roger Stupp, Juan Fueyo, Candelaria Gomez-Manzano, Frederick F Lang, Gelareh Zadeh
Oncolytic DNX-2401 virotherapy plus pembrolizumab in recurrent glioblastoma: a phase 1/2 trial. Nature medicine (2023)
Mac Lean P Nasrallah, Kenneth D Aldape
Molecular classification and grading of meningioma. Journal of neuro-oncology 161 (2) (2023)
Tathiane Maistro Malta, Thais S Sabedot, Natalia S Morosini, Indrani Datta, Luciano Garofano, Wies R Vallentgoed, Frederick S Varn, Kenneth D Aldape, Fulvio D'Angelo, Spyridon Bakas, Jill S Barnholtz-Sloan, Hui Kong Gan, Mohammad Hasanain, Ann-Christin Hau, Kevin C Johnson, Simona Cazacu, Ana C deCarvalho, Mustafa Khasraw, Emre Kocakavuk, Mathilde C M Kouwenhoven, Simona Migliozzi, Simone P Niclou, Johanna M Niers, David Ryan Ormond, Sun Ha Paek, Guido Reifenberger, Peter A E Sillevis Smitt, Marion Smits, Lucy F Stead, Martin J Van Den Bent, Erwin G Van Meir, Annemiek M E Walenkamp, Tobias Weiss, Michael Weller, Bart A Westerman, Bauke Ylstra, Pieter Wesseling, Anna Lasorella, Pim J French, Laila M Poisson, The Glass Consortium, Roel G W Verhaak, Antonio Iavarone, Houtan Noushmehr
The epigenetic evolution of glioma is determined by the IDH1 mutation status and treatment regimen. Cancer research (2023)
Suganth Suppiah, Sheila Mansouri, Yasin Mamatjan, Jeffrey C Liu, Minu M Bhunia, Vikas Patil, Prisni Rath, Bharati Mehani, Pardeep Heir, Severa Bunda, German L Velez-Reyes, Olivia Singh, Nazanin Ijad, Neda Pirouzmand, Tatyana Dalcourt, Ying Meng, Shirin Karimi, Qingxia Wei, Farshad Nassiri, Trevor J Pugh, Gary D Baider, Kenneth D Aldape, David A Largaespada, Gelareh Zadeh
Multiplatform molecular profiling uncovers two subgroups of malignant peripheral nerve sheath tumors with distinct therapeutic vulnerabilities. Nature communications 14 (1) (2023)
Kristyn Galbraith, Jonathan Serrano, Guomiao Shen, Ivy Tran, Cheyanne C Slocum, Courtney Ketchum, Zied Abdullaev, Rust Turakulov, Tejus A Bale, Marc Ladanyi, Purvil Sukhadia, Michael Zaidinski, Kerry Mullaney, Sara DiNapoli, Benjamin L Liechty, Marissa Barbaro, Jeffrey C Allen, Sharon L Gardner, Jeffrey Wisoff, David Harter, Eveline Teresa Hidalgo, John G Golfinos, Daniel A Orringer, Kenneth D Aldape, Jamal K Benhamida, Kazimierz O Wrzeszczynski, George Jour, Matija Snuderl
Impact of rare and multiple concurrent gene fusions on diagnostic DNA methylation classifier in brain tumors. Molecular cancer research : MCR (2023)
Justin Z Wang, Farshad Nassiri, Kenneth D Aldape, Gelareh Zadeh
Introduction: Ongoing clinical challenges in the management of meningiomas and future directions. Neuro-oncology advances 5 (Suppl 1) (2023)
Yuelin Liu, Xuan Cindy Li, Farid Rashidi Mehrabadi, Alejandro A Schäffer, Drew Pratt, David R Crawford, Salem Malikic, Erin K Molloy, Vishaka Gopalan, Steve M Mount, Eytan Ruppin, Kenneth D Aldape, S Cenk Sahinalp
Single-cell methylation sequencing data reveal succinct metastatic migration histories and tumor progression models. Genome research (2023)
Cristiane M Ida, Kenneth D Aldape
Atypical Neurofibromatous Lesions: Epigenetic Cousins of Other Benign Peripheral Nerve Sheath Tumors? Neuro-oncology (2023)
Suganth Suppiah, Sheila Mansouri, Yasin Mamatjan, Jeffrey C Liu, Minu M Bhunia, Vikas Patil, Prisni Rath, Bharati Mehani, Pardeep Heir, Severa Bunda, German L Velez-Reyes, Olivia Singh, Nazanin Ijad, Neda Pirouzmand, Tatyana Dalcourt, Ying Meng, Shirin Karimi, Qingxia Wei, Farshad Nassiri, Trevor J Pugh, Gary D Baider, Kenneth D Aldape, David A Largaespada, Gelareh Zadeh
Multiplatform molecular profiling uncovers two subgroups of malignant peripheral nerve sheath tumors with distinct therapeutic vulnerabilities. Nature communications 14 (1) (2023)
Maria A Gubbiotti, Mariarita Santi, Philip B Storm, Marilyn Li, Feng Xu, Zied Abdullaev, Kenneth D Aldape, Angela N Viaene
First-time identification of a KIF5B-NTRK2 fusion in extraventricular neurocytoma. Journal of neuropathology and experimental neurology 82 (3) (2023)
Maria A Gubbiotti, Mariarita Santi, Philip B Storm, Marilyn Li, Feng Xu, Zied Abdullaev, Kenneth D Aldape, Angela N Viaene
First-time identification of a KIF5B-NTRK2 fusion in extraventricular neurocytoma. Journal of neuropathology and experimental neurology (2023)
Mac Lean P Nasrallah, Kenneth D Aldape
Molecular classification and grading of meningioma. Journal of neuro-oncology (2023)
Suganth Suppiah, Sheila Mansouri, Yasin Mamatjan, Jeffrey C Liu, Minu M Bhunia, Vikas Patil, Prisni Rath, Bharati Mehani, Pardeep Heir, Severa Bunda, German L Velez-Reyes, Olivia Singh, Nazanin Ijad, Neda Pirouzmand, Tatyana Dalcourt, Ying Meng, Shirin Karimi, Qingxia Wei, Farshad Nassiri, Trevor J Pugh, Gary D Baider, Kenneth D Aldape, David A Largaespada, Gelareh Zadeh
Multiplatform molecular profiling uncovers two subgroups of malignant peripheral nerve sheath tumors with distinct therapeutic vulnerabilities. Nature communications 14 (1) (2023)
Beibei Ru, Jinlin Huang, Yu Zhang, Kenneth D Aldape, Peng Jiang
Estimation of cell lineages in tumors from spatial transcriptomics data. Nature communications 14 (1) (2023)
Beibei Ru, Jinlin Huang, Yu Zhang, Kenneth D Aldape, Peng Jiang
Estimation of cell lineages in tumors from spatial transcriptomics data. Nature communications 14 (1) (2023)
Beibei Ru, Jinlin Huang, Yu Zhang, Kenneth D Aldape, Peng Jiang
Estimation of cell lineages in tumors from spatial transcriptomics data. Nature communications 14 (1) (2023)
Norman L Lehman, Nathalie Spassky, Müge Sak, Amy Webb, Cory T Zumbar, Aisulu Usubalieva, Khaled J Alkhateeb, Joseph P McElroy, Kirsteen H Maclean, Paola Fadda, Tom Liu, Vineela Gangalapudi, Jamie Carver, Zied Abdullaev, Cynthia Timmers, John R Parker, Christopher R Pierson, Bret C Mobley, Murat Gokden, Eyas M Hattab, Timothy Parrett, Ralph X Cooke, Trang D Lehman, Stefan Costinean, Anil Parwani, Brian J Williams, Randy L Jensen, Kenneth D Aldape, Akshitkumar M Mistry
Author Correction: Astroblastomas exhibit radial glia stem cell lineages and differential expression of imprinted and X-inactivation escape genes. Nature communications 14 (1) (2023)
Mac Lean P Nasrallah, Kenneth D Aldape
Molecular classification and grading of meningioma. Journal of neuro-oncology 161 (2) (2023)
Maria A Gubbiotti, Mariarita Santi, Philip B Storm, Marilyn Li, Feng Xu, Zied Abdullaev, Kenneth D Aldape, Angela N Viaene
First-time identification of a KIF5B-NTRK2 fusion in extraventricular neurocytoma. Journal of neuropathology and experimental neurology 82 (3) (2023)
Beibei Ru, Jinlin Huang, Yu Zhang, Kenneth D Aldape, Peng Jiang
Estimation of cell lineages in tumors from spatial transcriptomics data. Nature communications 14 (1) (2023)
C Mircea S Tesileanu, Marc Sanson, Wolfgang Wick, Alba A Brandes, Paul M J Clement, Sara C Erridge, Michael A Vogelbaum, Anna K Nowak, Jean-Francois Baurain, Warren P Mason, Helen Wheeler, Olivier Louis Chinot, Sanjeev Gill, Matthew Griffin, Leland Rogers, Walter Taal, Roberta Rudà, Michael Weller, Catherine McBain, Myra E van Linde, Kenneth D Aldape, Robert B Jenkins, Johan M Kros, Pieter Wesseling, Andreas von Deimling, Youri Hoogstrate, Iris de Heer, Peggy N Atmodimedjo, Hendrikus Jan Dubbink, Rutger W W Brouwer, Wilfred F J Van IJcken, Kin Jip Cheung, Vassilis Golfinopoulos, Brigitta G Baumert, Thierry Gorlia, Pim J French, Martin J Van Den Bent
Temozolomide and Radiotherapy versus Radiotherapy Alone in Patients with Glioblastoma, IDH-wildtype: Post Hoc Analysis of the EORTC Randomized Phase III CATNON Trial. Clinical cancer research : an official journal of the American Association for Cancer Research 28 (12) (2022)
Neelam Sinha, Sanju Sinha, Kuoyuan Cheng, Sanna Madan, Ayelet Erez, Bríd M Ryan, Alejandro A Schäffer, Kenneth D Aldape, Eytan Ruppin
Using a Recently Approved Tumor Mutational Burden Biomarker to Stratify Patients for Immunotherapy May Introduce a Sex Bias. JCO precision oncology 5 (2022)
Erin Goode, Liliana Montoya, Eric Graham, Brianna Pruniski, Curtis L Simmons, Alexander Ngwube, Lindsey M Hoffman, Nishant Tiwari, Kenneth D Aldape, Harper N Price, Vera A Paulson, Ross Mangum
Diagnostic and Prognostic Implications of GNAS Inactivation in Sonic Hedgehog-Activated Medulloblastoma: Case Report with Comprehensive Molecular Profiling and Review of Literature. JCO precision oncology 6 (2022)
Norman L Lehman, Nathalie Spassky, Müge Sak, Amy Webb, Cory T Zumbar, Aisulu Usubalieva, Khaled J Alkhateeb, Joseph P McElroy, Kirsteen H Maclean, Paola Fadda, Tom Liu, Vineela Gangalapudi, Jamie Carver, Zied Abdullaev, Cynthia Timmers, John R Parker, Christopher R Pierson, Bret C Mobley, Murat Gokden, Eyas M Hattab, Timothy Parrett, Ralph X Cooke, Trang D Lehman, Stefan Costinean, Anil Parwani, Brian J Williams, Randy L Jensen, Kenneth D Aldape, Akshitkumar M Mistry
Astroblastomas exhibit radial glia stem cell lineages and differential expression of imprinted and X-inactivation escape genes. Nature communications 13 (1) (2022)
Carolyn G Chen, Kenneth D Aldape, Kiratpreet S Dhillon, Douglas W Laske, Zied Abdullaev, Dario A Marotta, Markku Miettinen, Mark T Curtis
DNA methylation profiling and histologic analysis of sellar TTF-1-positive papillary epithelial tumor supports a novel CNS entity. Journal of neuropathology and experimental neurology (2022)
J Franklin Berry, Devan W Vidrine, Antonina A Wojcik, Darshan Trivedi, Joseph Keen, Martha Quezado, Zied Abdullaev, Courtney Ketchum, Drew Pratt, Kenneth D Aldape, Robert Jenkins, Cristiane M Ida
Glioblastoma, IDH-Wildtype Harboring a KIAA1549::BRAF Fusion: Report of a Case With Comprehensive Molecular Profiling. Journal of neuropathology and experimental neurology 81 (12) (2022)
Neelam Sinha, Sanju Sinha, Cristina Valero, Alejandro A Schäffer, Kenneth D Aldape, Kevin Litchfield, Timothy A Chan, Luc G T Morris, Eytan Ruppin
Immune Determinants of the Association between Tumor Mutational Burden and Immunotherapy Response across Cancer Types. Cancer research 82 (11) (2022)
Yu Zhang, Trang Vu, Douglas C Palmer, Rigel J Kishton, Lanqi Gong, Jiao Huang, Thanh Nguyen, Zuojia Chen, Cari Smith, Ferenc Livák, Rohit Paul, Chi-Ping Day, Chuan Wu, Glenn Merlino, Kenneth D Aldape, Xin-Yuan Guan, Peng Jiang
A T cell resilience model associated with response to immunotherapy in multiple tumor types. Nature medicine 28 (7) (2022)
Andrew B Lassman, Stephanie L Pugh, Tony J C Wang, Kenneth D Aldape, Hui K Gan, Matthias Preusser, Michael A Vogelbaum, Erik P Sulman, Minhee Won, Peixin Zhang, Golnaz Moazami, Marian S Macsai, Mark R Gilbert, Earle E Bain, Vincent Blot, Peter J Ansell, Suvajit Samanta, Madan G Kundu, Terri S Armstrong, Jeffrey S Wefel, Clemens Seidel, Filip Y de Vos, Sigmund Hsu, Andrés F Cardona, Giuseppe Lombardi, Dmitry Bentsion, Richard A Peterson, Craig Gedye, Véronique Bourg, Antje Wick, Walter J Curran, Minesh P Mehta
Depatuxizumab-mafodotin in EGFR-amplified newly diagnosed glioblastoma: a phase III randomized clinical trial. Neuro-oncology (2022)
Mark W Youngblood, Anh N Tran, Wenxia Wang, Shejuan An, Denise Scholtens, Lyndsee Zhang, Kaitlyn O'Shea, Jenny L Pokorny, Stephen T Magill, Sean Sachdev, Rimas V Lukas, Atique U Ahmed, Dusten Unruh, Jordain Walshon, Kathleen McCortney, Yufen Wang, Aneta Baran, Felix Sahm, Kenneth D Aldape, James P Chandler, C David James, Amy B Heimberger, Craig M Horbinski
Docetaxel Targets Aggressive Methylation Profiles and Serves as a Radiosensitizer in High-Risk Meningiomas. Neuro-oncology (2022)
Nishanth Ulhas Nair, Kuoyuan Cheng, Lamis Naddaf, Elad Sharon, Lipika R Pal, Padma Sheila Rajagopal, Irene Unterman, Kenneth D Aldape, Sridhar Hannenhalli, Chi-Ping Day, Yuval Tabach, Eytan Ruppin
Cross-species identification of cancer resistance-associated genes that may mediate human cancer risk. Science advances 8 (31) (2022)
Zhichao Wu, Sharika Rajan, Hye-Jung Chung, Mark Raffeld, Pavalan Panneer Selvam, Leonille Schweizer, Arie Perry, David Samuel, Caterina Giannini, Aditya Ragunathan, Matthew P Frosch, Michael S Marshall, Daniel R Boué, Kliment Donev, Stewart G Neill, Igor Fernandes, Adam Resnick, Brian Rood, Thomas J Cummings, Anne F Buckley, Linda Szymanski, Osorio Lopes Abath Neto, Leor Zach, Howard Colman, Samuel Cheshier, Jennifer Ziskin, Manoj Tyagi, David Capper, Zied Abdullaev, Patrick J Cimino, Martha Quezado, Drew Pratt, Kenneth D Aldape
Molecular and clinicopathologic characteristics of gliomas with EP300::BCOR fusions. Acta neuropathologica 144 (6) (2022)
Zhichao Wu, Osorio Lopes Abath Neto, Tejus A Bale, Jamal Benhamida, Douglas Mata, Rust Turakulov, Zied Abdullaev, Daniel Marker, Courtney Ketchum, Hye-Jung Chung, Caterina Giannini, Martha Quezado, Drew Pratt, Kenneth D Aldape
DNA methylation analysis of glioblastomas harboring FGFR3-TACC3 fusions identifies a methylation subclass with better patient survival. Acta neuropathologica 144 (1) (2022)
Bharati Mehani, Saleembhasha Asanigari, Hye-Jung Chung, Karen Dazelle, Arashdeep Singh, Sridhar Hannenhalli, Kenneth D Aldape
Immune cell gene expression signatures in diffuse glioma are associated with IDH mutation status, patient outcome and malignant cell state, and highlight the importance of specific cell subsets in glioma biology. Acta neuropathologica communications 10 (1) (2022)
Zhichao Wu, Zied Abdullaev, Sriram Venneti, Hye-Jung Chung, Shannon Skarshaug, Valerie Zgonc, Candice Perry, Svetlana Pack, Lola Saidkhodjaeva, Sushma Nagaraj, Manoj Tyagi, Vineela Gangalapudi, Kristin Valdez, Rust Turakulov, Liqiang Xi, Mark Raffeld, Antonios Papanicolau-Sengos, Kayla O'Donnell, Michael Newford, Mark R Gilbert, Felix Sahm, Abigail K Suwala, Andreas von Deimling, Yasin Mamatjan, Shirin Karimi, Farshad Nassiri, Gelareh Zadeh, Eytan Ruppin, Martha Quezado, Kenneth D Aldape
Impact of the methylation classifier and ancillary methods on CNS tumor diagnostics. Neuro-oncology (2021)
Sybren L N Maas, Damian Stichel, Thomas Hielscher, Philipp Sievers, Anna Sophie Berghoff, Daniel Schrimpf, Martin Sill, Philipp Euskirchen, Christina Blume, Areeba Patel, Helin Dogan, David Reuss, Hildegard Dohmen, Marco Stein, Annekathrin Reinhardt, Abigail K Suwala, Annika K Wefers, Peter Baumgarten, Franz L Ricklefs, Elisabeth J Rushing, Melanie Bewerunge-Hudler, Ralf Ketter, Cornelia Brendle, Zane Jaunmuktane, Severina Leu, Fay E A Greenway, Leslie R Bridges, Timothy Jones, Conor Grady, Jonathan Serrano, John Golfinos, Chandranath Sen, Christian Mawrin, Christine Jungk, Daniel Hänggi, Manfred Westphal, Katrin Lamszus, Nima Etminan, Gerhard Jungwirth, Christel Herold-Mende, Andreas Unterberg, Patrick N Harter, Hans-Georg Wirsching, Marian C Neidert, Miriam Ratliff, Michael Platten, Matija Snuderl, Kenneth D Aldape, Sebastian Brandner, Juergen Hench, Stephan Frank, Stefan M Pfister, David T W Jones, Guido Reifenberger, Till Acker, Wolfgang Wick, Michael Weller, Matthias Preusser, Andreas von Deimling, Felix Sahm, null null
Integrated Molecular-Morphologic Meningioma Classification: A Multicenter Retrospective Analysis, Retrospectively and Prospectively Validated. Journal of clinical oncology : official journal of the American Society of Clinical Oncology 39 (34) (2021)
Omkar Singh, Drew Pratt, Kenneth D Aldape
Immune cell deconvolution of bulk DNA methylation data reveals an association with methylation class, key somatic alterations, and cell state in glial/glioneuronal tumors. Acta neuropathologica communications 9 (1) (2021)
James L Rogers, Elizabeth Vera, Alvina Acquaye, Nicole Briceno, Varna Jammula, Amanda L King, Heather Leeper, Martha M Quezado, Javier Gonzalez Alarcon, Lisa Boris, Eric Burton, Orieta Celiku, Anna Choi, Alexa Christ, Sonja Crandon, Ewa Grajkowska, Nicole Leggiero, Nicole Lollo, Marta Penas-Prado, Jennifer Reyes, Christine Siegel, Brett J Theeler, Michael Timmer, Kathleen Wall, Jing Wu, Kenneth D Aldape, Mark R Gilbert, Terri S Armstrong
Living with a central nervous system (CNS) tumor: findings on long-term survivorship from the NIH Natural History Study. Neuro-oncology practice 8 (4) (2021)
Joseph Driver, Samantha E Hoffman, Sherwin Tavakol, Eleanor Woodward, Eduardo A Maury, Varun Bhave, Noah F Greenwald, Farshad Nassiri, Kenneth D Aldape, Gelareh Zadeh, Abrar Choudhury, Harish N Vasudevan, Stephen T Magill, David R Raleigh, Malak Abedalthagafi, Ayal A Aizer, Brian M Alexander, Keith L Ligon, David A Reardon, Patrick Y Wen, Ossama Al-Mefty, Azra H Ligon, Adrian M Dubuc, Rameen Beroukhim, Elizabeth B Claus, Ian F Dunn, Sandro Santagata, Wenya Linda Bi
A Molecularly Integrated Grade for Meningioma. Neuro-oncology (2021)
Guangyang Yu, Ying Pang, Mythili Merchant, Chimene A Kesserwan, Vineela Gangalapudi, Abdalla Abdelmaksoud, Alice Ranjan, Olga Kim, Jun S Wei, Hsien-Chao Chou, Xinyu Wen, Sivasish Sindiri, Young K Song, Liqiang Xi, Rosandra N Kaplan, Terri S Armstrong, Mark R Gilbert, Kenneth D Aldape, Javed Khan, Jing Wu
Tumor Mutation Burden, Expressed Neoantigens and the Immune Microenvironment in Diffuse Gliomas. Cancers 13 (23) (2021)
Sriram Venneti, Felix Sahm, Kenneth D Aldape
DNA methylation profiling as a model for discovery and precision diagnostics in neuro-oncology. Neuro-oncology 23 (23 Suppl 5) (2021)