Stephen Woloszynek

Publication Activity (10 Years)

Years Active: 2019-2021
Publications (10 Years): 4

Top Topics

Cross Sectional

Antibiotic Resistance Genes

Top Venues

PLoS computational biology

Journal of the Royal Society, Interface

This page only lists publications with an associated author ORCID identifier.

Publications

Zhengqiao Zhao, Stephen Woloszynek, Felix Agbavor, Joshua Chang Mell, Bahrad A Sokhansanj, Gail L Rosen
Learning, visualizing and exploring 16S rRNA structure using an attention-based deep neural network. PLoS computational biology 17 (9) (2021)
Travers Ching, Daniel Scott Himmelstein, Brett K Beaulieu-Jones, Alexandr A Kalinin, Brian T Do, Gregory P Way, Enrico Ferrero, Paul-Michael Agapow, Michael Zietz, Michael M Hoffman, Wei Xie, Gail L Rosen, Benjamin J Lengerich, Johnny Israeli, Jack Lanchantin, Stephen Woloszynek, Anne E Carpenter, Avanti Shrikumar, Jinbo Xu, Evan M Cofer, Christopher A Lavender, Srinivas C Turaga, Amr M Alexandari, Zhiyong Lu, David J Harris, Dave DeCaprio, Yanjun Qi, Anshul Kundaje, Yifan Peng, Laura K Wiley, Marwin H S Segler, Simina M Boca, S Joshua Swamidass, Austin Huang, Anthony Gitter, Casey S Greene
Opportunities and obstacles for deep learning in biology and medicine. Journal of the Royal Society, Interface 15 (141) (2019)
Stephen Woloszynek, Joshua Chang Mell, Zhengqiao Zhao, Gideon Simpson, Michael P O'Connor, Gail L Rosen
Exploring thematic structure and predicted functionality of 16S rRNA amplicon data. PloS one 14 (12) (2019)
Stephen Woloszynek, Zhengqiao Zhao, Jian Chen, Gail L Rosen
16S rRNA sequence embeddings: Meaningful numeric feature representations of nucleotide sequences that are convenient for downstream analyses. PLoS computational biology 15 (2) (2019)