Thomas R Ioerger (Thomas Ioerger)

Publication Activity (10 Years)

Years Active: 2018-2021
Publications (10 Years): 9

Top Topics

Dna Methylation

Mycobacterium Tuberculosis

Top Venues

BMC bioinformatics

Evolutionary bioinformatics online

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Esha Dutta, Michael A DeJesus, Nadine Ruecker, Anisha Zaveri, Eun-Ik Koh, Christopher M Sassetti, Dirk Schnappinger, Thomas R Ioerger
An improved statistical method to identify chemical-genetic interactions by exploiting concentration-dependence. PloS one 16 (10) (2021)
Sanjeevani Choudhery, A Jacob Brown, Chidiebere Akusobi, Eric J Rubin, Christopher M Sassetti, Thomas R Ioerger
Modeling Site-Specific Nucleotide Biases Affecting Himar1 Transposon Insertion Frequencies in TnSeq Data Sets. mSystems 6 (5) (2021)
Hongwei Su, Kan Lin, Divya Tiwari, Claire Healy, Carolina M Trujillo, Yao Liu, Thomas R Ioerger, Dirk Schnappinger, Sabine Ehrt
Genetic models of latent tuberculosis in mice reveal differential influence of adaptive immunity. The Journal of experimental medicine 218 (9) (2021)
Yi-Pin Lai, Thomas R Ioerger
Exploiting Homoplasy in Genome-Wide Association Studies to Enhance Identification of Antibiotic-Resistance Mutations in Bacterial Genomes. Evolutionary bioinformatics online 16 (2020)
Divya Tiwari, Sae Woong Park, Maram M Essawy, Surendra Dawadi, Alan Mason, Madhumitha Nandakumar, Matthew Zimmerman, Marizel Mina, Hsin Pin Ho, Curtis A Engelhart, Thomas R Ioerger, James C Sacchettini, Kyu Rhee, Sabine Ehrt, Courtney C Aldrich, Veronique Anne Dartois, Dirk Schnappinger
Targeting protein biotinylation enhances tuberculosis chemotherapy. Science translational medicine 10 (438) (2019)
Siddharth Subramaniyam, Michael A DeJesus, Anisha Zaveri, Clare M Smith, Richard E Baker, Sabine Ehrt, Dirk Schnappinger, Christopher M Sassetti, Thomas R Ioerger
Statistical analysis of variability in TnSeq data across conditions using zero-inflated negative binomial regression. BMC bioinformatics 20 (1) (2019)
Elaine Ballinger, John Mosior, Travis E Hartman, Kristin Burns-Huang, Ben S Gold, Roxanne Morris, Laurent Goullieux, Isabelle Blanc, Julien Vaubourgeix, Sophie Lagrange, Laurent Fraisse, Stéphanie Sans, Cedric Couturier, Eric Bacqué, Kyu Rhee, Sarah M Scarry, Jeffrey Aube, Guangbin Yang, Ouathek Ouerfelli, Dirk Schnappinger, Thomas R Ioerger, Curtis A Engelhart, Jennifer A McConnell, Kathrine McAulay, Allison Fay, Christine Roubert, James C Sacchettini, Carl F Nathan
Opposing reactions in coenzyme A metabolism sensitize Mycobacterium tuberculosis to enzyme inhibition. Science (New York, N.Y.) 363 (6426) (2019)
Allison F Carey, Jeremy M Rock, Inna V Krieger, Michael R Chase, Marta F Suarez, Sebastien Gagneux, James C Sacchettini, Thomas R Ioerger, Sarah M Fortune
TnSeq of Mycobacterium tuberculosis clinical isolates reveals strain-specific antibiotic liabilities. PLoS pathogens 14 (3) (2018)
Yi-Pin Lai, Thomas R Ioerger
A statistical method to identify recombination in bacterial genomes based on SNP incompatibility. BMC bioinformatics 19 (1) (2018)