Tim van Opijnen (Tim Van Opijnen)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 33

Top Topics

Acinetobacter Baumannii

Top Venues

Angewandte Chemie (International ed. in English)

Proceedings of the National Academy of Sciences of the United States of America

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) 63 (9) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) 63 (9) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) 63 (9) (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) 63 (9) (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) 63 (9) (2024)
Bimal Jana, Xue Liu, Julien Dénéréaz, Hongshik Park, Dmitry Leshchiner, Bruce Liu, Clement Gallay, Junhao Zhu, Jan-Willem van Groenigen, Tim van Opijnen
CRISPRi-TnSeq maps genome-wide interactions between essential and non-essential genes in bacteria. Nature microbiology (2024)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Kaitlin Malley, Quan Pham, Conor Loynd, Zeyi Huang, Tim van Opijnen, Abhishek Chatterjee
Enhanced Directed Evolution in Mammalian Cells Yields a Hyperefficient Pyrrolysyl tRNA for Noncanonical Amino Acid Mutagenesis. Angewandte Chemie (International ed. in English) (2024)
Evan J Pardue, Mariana G Sartorio, Biswanath Jana, Nichollas E Scott, Wandy L Beatty, Juan C Ortiz-Marquez, Tim van Opijnen, Fong-Fu Hsu, Robert F Potter, Mario F Feldman
Dual membrane-spanning anti-sigma factors regulate vesiculation in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (10) (2024)
Sarah L Price, Derek Thibault, Taylor M Garrison, Amanda Brady, Haixun Guo, Thomas E Kehl-Fie, Sylvie Garneau-Tsodikova, Robert D Perry, Tim van Opijnen, Matthew B Lawrenz
Droplet Tn-Seq identifies the primary secretion mechanism for yersiniabactin in Yersinia pestis. EMBO reports (2023)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods (2022)
Wenwen Huo, Lindsay M Busch, Juan Hernandez-Bird, Efrat Hamami, Christopher W Marshall, Edward Geisinger, Vaughn S Cooper, Tim van Opijnen, Jason W Rosch, Ralph R Isberg
Immunosuppression broadens evolutionary pathways to drug resistance and treatment failure during Acinetobacter baumannii pneumonia in mice. Nature microbiology 7 (6) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Dmitry Leshchiner, Federico Rosconi, Bharathi Sundaresh, Emily Rudmann, Luisa Maria Nieto Ramirez, Andrew T Nishimoto, Stephen J Wood, Bimal Jana, Noemí Buján, Kaicheng Li, Jianmin Gao, Matthew Frank, Stephanie M Reeve, Richard E Lee, Charles O Rock, Jason W Rosch, Tim van Opijnen
A genome-wide atlas of antibiotic susceptibility targets and pathways to tolerance. Nature communications 13 (1) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Federico Rosconi, Emily Rudmann, Jien Li, Defne Surujon, Jon Anthony, Matthew Frank, Dakota S Jones, Charles O Rock, Jason W Rosch, Christopher D Johnston, Tim van Opijnen
A bacterial pan-genome makes gene essentiality strain-dependent and evolvable. Nature microbiology 7 (10) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Delilah Jewel, Rachel E Kelemen, Rachel L Huang, Zeyu Zhu, Bharathi Sundaresh, Xiaofu Cao, Kaitlin Malley, Zeyi Huang, Muhammad Pasha, Jon Anthony, Tim van Opijnen, Abhishek Chatterjee
Virus-assisted directed evolution of enhanced suppressor tRNAs in mammalian cells. Nature methods 20 (1) (2022)
Edward Geisinger, Nadav J Mortman, Yunfei Dai, Murat Cokol, Sapna Syal, Andrew Farinha, Delaney G Fisher, Amy Y Tang, David W Lazinski, Stephen Wood, Jon Anthony, Tim van Opijnen, Ralph R Isberg
Antibiotic susceptibility signatures identify potential antimicrobial targets in the Acinetobacter baumannii cell envelope. Nature communications 11 (1) (2020)
Stacie A Clark, Derek Thibault, Lauren M Shull, Kimberly M Davis, Emily Aunins, Tim van Opijnen, Ralph R Isberg
Topologically correct synthetic reconstruction of pathogen social behavior found during Yersinia growth in deep tissue sites. eLife 9 (2020)
Amy K Cain, Lars Barquist, Andrew L Goodman, Ian T Paulsen, Julian Parkhill, Tim van Opijnen
A decade of advances in transposon-insertion sequencing. Nature reviews. Genetics 21 (9) (2020)
Edward Geisinger, Nadav J Mortman, Yunfei Dai, Murat Cokol, Sapna Syal, Andrew Farinha, Delaney G Fisher, Amy Y Tang, David W Lazinski, Stephen Wood, Jon Anthony, Tim van Opijnen, Ralph R Isberg
Author Correction: Antibiotic susceptibility signatures identify potential antimicrobial targets in the Acinetobacter baumannii cell envelope. Nature communications 11 (1) (2020)
Zeyu Zhu, Defne Surujon, Juan C Ortiz-Marquez, Wenwen Huo, Ralph R Isberg, José Bento, Tim van Opijnen
Entropy of a bacterial stress response is a generalizable predictor for fitness and antibiotic sensitivity. Nature communications 11 (1) (2020)
Derek Thibault, Paul A Jensen, Stephen Wood, Christine Qabar, Stacie Clark, Mara G Shainheit, Ralph R Isberg, Tim van Opijnen
Droplet Tn-Seq combines microfluidics with Tn-Seq for identifying complex single-cell phenotypes. Nature communications 10 (1) (2019)
Indu Warrier, Nikhil Ram-Mohan, Zeyu Zhu, Ariana Hazery, Haley Echlin, Jason Rosch, Michelle M Meyer, Tim van Opijnen
The Transcriptional landscape of Streptococcus pneumoniae TIGR4 reveals a complex operon architecture and abundant riboregulation critical for growth and virulence. PLoS pathogens 14 (12) (2018)