Martin A Lysak

ResearcherID Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 37

Top Venues

The Plant journal : for cell and molecular biology

The Plant cell

Molecular biology and evolution

Communications biology

Masaryk University

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Masaryk University

Czechia

research group leader/Professor :: CEITEC

Publications

Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hong-Wei Hou, Sachihiro Matsunaga, Martin A Lysak, Seisuke Kimura
A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications biology 7 (1) (2024)
Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hong-Wei Hou, Sachihiro Matsunaga, Martin A Lysak, Seisuke Kimura
A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications biology 7 (1) (2024)
Marc Beringer, Rimjhim Roy Choudhury, Terezie M Mandakova, Sandra Grünig, Manuel Poretti, Ilia J Leitch, Martin A Lysak, Christian Parisod
Biased Retention of Environment-Responsive Genes Following Genome Fractionation. Molecular biology and evolution 41 (8) (2024)
Terezie M Mandakova, Alice Krumpolcová, Roman Matyášek, Roman Volkov, Martin A Lysak, Ales Kovařík
Uniparental silencing of 5S rRNA genes in plant allopolyploids - insights from Cardamine (Brassicaceae). The Plant journal : for cell and molecular biology 119 (3) (2024)
Marc Beringer, Rimjhim Roy Choudhury, Terezie M Mandakova, Sandra Grünig, Manuel Poretti, Ilia J Leitch, Martin A Lysak, Christian Parisod
Biased retention of environment-responsive genes following genome fractionation. Molecular biology and evolution (2024)
Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hong-Wei Hou, Sachihiro Matsunaga, Martin A Lysak, Seisuke Kimura
A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications biology 7 (1) (2024)
Marc Beringer, Rimjhim Roy Choudhury, Terezie M Mandakova, Sandra Grünig, Manuel Poretti, Ilia J Leitch, Martin A Lysak, Christian Parisod
Biased Retention of Environment-Responsive Genes Following Genome Fractionation. Molecular biology and evolution 41 (8) (2024)
Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hong-Wei Hou, Sachihiro Matsunaga, Martin A Lysak, Seisuke Kimura
A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications biology 7 (1) (2024)
Terezie M Mandakova, Alice Krumpolcová, Roman Matyášek, Roman Volkov, Martin A Lysak, Ales Kovařík
Uniparental silencing of 5S rRNA genes in plant allopolyploids - insights from Cardamine (Brassicaceae). The Plant journal : for cell and molecular biology (2024)
Tomoaki Sakamoto, Shuka Ikematsu, Hokuto Nakayama, Terezie Mandáková, Gholamreza Gohari, Takuya Sakamoto, Gaojie Li, Hong-Wei Hou, Sachihiro Matsunaga, Martin A Lysak, Seisuke Kimura
A chromosome-level genome assembly for the amphibious plant Rorippa aquatica reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications biology 7 (1) (2024)
Ladislav Mucina, Klaus Mummenhoff, Pieter Winter, Adriaan van Niekerk, Terezie M Mandakova, Martin A Lysak
Drought and life-history strategies in Heliophila (Brassicaceae): Response to Monroe et al. (2019): 'Drought regimens predict life-history strategies in Heliophila'. The New phytologist (2023)
Dmitry A German, Kasper P Hendriks, Marcus A Koch, Frederic Lens, Martin A Lysak, C Donovan Bailey, Klaus Mummenhoff, Ihsan A Al-Shehbaz
An updated classification of the Brassicaceae (Cruciferae). PhytoKeys 220 (2023)
Makenzie E Mabry, R Shawn Abrahams, Ihsan A Al-Shehbaz, William J Baker, Simon Barak, Michael S Barker, Russell L Barrett, Aleksandra Beric, Samik Bhattacharya, Sarah B Carey, Gavin C Conant, John G Conran, Maheshi Dassanayake, Patrick P Edger, Jocelyn C Hall, Yue Hao, Kasper P Hendriks, Julian M Hibberd, Graham John King, Daniel J Kliebenstein, Marcus A Koch, Ilia J Leitch, Frederic Lens, Martin A Lysak, Alex C McAlvay, Michael T W McKibben, Francesco Mercati, Richard C Moore, Klaus Mummenhoff, Daniel J Murphy, Lachezar A Nikolov, Michael T Pisias, Eric H Roalson, Michael Eric Schranz, Shawn K Thomas, Qingyi Yu, Alan E Yocca, Joseph Chris Pires, Alex E Harkess
Complementing model species with model clades. The Plant cell (2023)
Yile Huang, Xinyi Guo, Kang Zhang, Terezie M Mandakova, Feng Cheng, Martin A Lysak
The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora. The Plant journal : for cell and molecular biology (2023)
Fei Shen, Shixiao Xu, Qi Shen, Changwei Bi, Martin A Lysak
The allotetraploid horseradish genome provides insights into subgenome diversification and formation of critical traits. Nature communications 14 (1) (2023)
László Bartha, Terezie M Mandakova, Ales Kovařík, Paul-Adrian Bulzu, Nathalie Rodde, Václav Mahelka, Martin A Lysak, Margaux-Alison Fustier, Jan Šafář, Petr Cápal, Lujza Keresztes, Horia Leonard Banciu
Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot-to-monocot horizontal transfer. The New phytologist 235 (3) (2022)
Sheng Zuo 左胜, Jianquan Liu, Terezie M Mandakova, Mark Edginton, Ihsan A Al-Shehbaz, Martin A Lysak
Genome diploidization associates with cladogenesis, trait disparity, and plastid gene evolution. Plant physiology 190 (1) (2022)
Yalu Ru, Terezie M Mandáková, Martin A Lysak, Marcus A Koch
The evolutionary history of Cardamine bulbifera shows a successful rapid postglacial Eurasian range expansion in the absence of sexual reproduction. Annals of botany 130 (2) (2022)
Terezie M Mandakova, Martin A Lysak
The identification of the missing maternal genome of the allohexaploid camelina (Camelina sativa). The Plant journal : for cell and molecular biology 112 (3) (2022)
Mert Dogan, Terezie M Mandakova, Jianquan Liu, Martin A Lysak
Idahoa and Subularia: Hidden polyploid origins of two enigmatic genera of crucifers. American journal of botany 109 (8) (2022)
Ricardo S Randall, Claire Jourdain, Anna Nowicka, Kateřina Kaduchová, Michaela Kubová, Mohammad A Ayoub, Veit Schubert, Christophe Tatout, Isabelle Colas, Kalyanikrishna ., Sophie Desset, Sarah Mermet, Aurélia Boulaflous-Stevens, Ivona Kubalová, Terezie M Mandakova, Stefan Heckmann, Martin A Lysak, Martina Panatta, Raffaella Santoro, Daniel Schubert, Ales Pecinka, Devin Routh, Célia Baroux
Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes. Nucleus (Austin, Tex.) 13 (1) (2022)
Sheng Zuo 左胜, Terezie M Mandakova, Michaela Kubová, Martin A Lysak
Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales). The Plant journal : for cell and molecular biology 110 (5) (2022)
Sheng Zuo 左胜, Ramakrishna Yadala, Fen Yang, Paul Talbert, Joerg Fuchs, Veit Schubert, Ulkar Ahmadli, Twan Rutten, Ales Pecinka, Martin A Lysak, Inna Lermontova
Recurrent Plant-Specific Duplications of KNL2 and Its Conserved Function as a Kinetochore Assembly Factor. Molecular biology and evolution (2022)
Martin A Lysak
Celebrating Mendel, McClintock, and Darlington: On end-to-end chromosome fusions and nested chromosome fusions. The Plant cell 34 (7) (2022)
Robin Burns, Terezie Mandáková, Joanna Gunis, Luz Mayela Soto-Jiménez, Chang Liu, Martin A Lysak, Polina Yu Novikova, Magnus Nordborg
Gradual evolution of allopolyploidy in Arabidopsis suecica. Nature ecology & evolution 5 (10) (2021)
Soheila Bayat, Martin A Lysak, Terezie M Mandakova
Genome structure and evolution in the cruciferous tribe Thlaspideae (Brassicaceae). The Plant journal : for cell and molecular biology (2021)
Matthew Naish, Michael Alonge, Piotr Wlodzimierz, Andrew J Tock, Bradley W Abramson, Anna Schmücker, Terezie M Mandakova, Bhagyshree Jamge, Christophe Lambing, Pallas C Kuo, Natasha Yelina, Nolan T Hartwick, Kelly Colt, Lisa M Smith, Jurriaan Ton, Tetsuji Kakutani, Robert A Martienssen, Korbinian Schneeberger, Martin A Lysak, Frederic Berger, Alexandros Bousios, Todd P Michael, Michael C Schatz, Ian R Henderson
The genetic and epigenetic landscape of the Arabidopsis centromeres. Science (New York, N.Y.) 374 (6569) (2021)
Jianquan Liu, Terezie M Mandakova, Karolína Trachtová, Barış Özüdoğru, Jian-Quan Liu, Martin A Lysak
Linked by Ancestral Bonds: Multiple Whole-Genome Duplications and Reticulate Evolution in a Brassicaceae Tribe. Molecular biology and evolution 38 (5) (2021)
Wenbo Shan, Michaela Kubová, Terezie M Mandakova, Martin A Lysak
Nuclear organization in crucifer genomes: nucleolus-associated telomere clustering is not a universal interphase configuration in Brassicaceae. The Plant journal : for cell and molecular biology 108 (2) (2021)
Wenjie Yang, Lei Zhang, Terezie Mandáková, Li Huang, Ting Li, Jiebei Jiang, Yongzhi Yang, Martin A Lysak, Jianquan Liu, Quan-Jun Hu
The chromosome-level genome sequence and karyotypic evolution of Megadenia pygmaea (Brassicaceae). Molecular ecology resources 21 (3) (2020)
Michael D Nowak, Siri Birkeland, Terezie Mandáková, Rimjhim Roy Choudhury, Xinyi Guo, Anna Lovisa S Gustafsson, Abel Gizaw, Audun Schrøder-Nielsen, Marco Fracassetti, Anne K Brysting, Loren Rieseberg, Tanja Slotte, Christian Parisod, Martin A Lysak, Christian Brochmann
The genome of Draba nivalis shows signatures of adaptation to the extreme environmental stresses of the Arctic. Molecular ecology resources 21 (3) (2020)
Terezie M Mandakova, Petra Hloušková, Marcus A Koch, Martin A Lysak
Genome Evolution in Arabideae Was Marked by Frequent Centromere Repositioning. The Plant cell 32 (3) (2020)
Terezie M Mandakova, Milan Pouch, Jordan R Brock, Ihsan A Al-Shehbaz, Martin A Lysak
Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. The Plant cell 31 (11) (2019)
Terezie M Mandakova, Martin A Lysak
Healthy Roots and Leaves: Comparative Genome Structure of Horseradish and Watercress. Plant physiology 179 (1) (2018)
Terezie M Mandakova, Petra Hloušková, Dmitry A German, Martin A Lysak
Monophyletic Origin and Evolution of the Largest Crucifer Genomes. Plant physiology 174 (4) (2017)
Terezie M Mandakova, Milan Pouch, Klára Harmanová, Shing Hei Zhan, Itay Mayrose, Martin A Lysak
Multispeed genome diploidization and diversification after an ancient allopolyploidization. Molecular ecology 26 (22) (2017)
Jan Janečka, Martin A Lysak
chromDraw: an R package for visualization of linear and circular karyotypes. Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology 24 (2) (2016)
Terezie Mandáková, Vasantika Singh, Ute Krämer, Martin A Lysak
Genome Structure of the Heavy Metal Hyperaccumulator Noccaea caerulescens and Its Stability on Metalliferous and Nonmetalliferous Soils. Plant physiology 169 (1) (2015)
Nora Hohmann, Eva M Wolf, Martin A Lysak, Marcus A Koch
A Time-Calibrated Road Map of Brassicaceae Species Radiation and Evolutionary History. The Plant cell 27 (10) (2015)
Céline Geiser, Terezie Mandáková, Nils Arrigo, Martin A Lysak, Christian Parisod
Repeated Whole-Genome Duplication, Karyotype Reshuffling, and Biased Retention of Stress-Responding Genes in Buckler Mustard. The Plant cell 28 (1) (2015)

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Publication Activity (10 Years)

Top Topics

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Martin A Lysak