Tomoo Ogi

Scopus Author ID Researcher Name Resolver ID ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 29

Top Topics

Intellectual Disability

Top Venues

Nature cell biology

Nature communications

Journal of human genetics

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Paniz Farshadyeganeh, Takahiro Yamada, Hirofumi Ohashi, Gen Nishimura, Hiroki Fujita, Yuriko Oishi, Misa Nunode, Shuku Ishikawa, Jun Murotsuki, Yuri Yamashita, Shiro Ikegawa, Tomoo Ogi, Eri Arikawa-Hirasawa, Kinji Ohno
Dyssegmental dysplasia Rolland-Desbuquois type is caused by pathogenic variants in HSPG2 - a founder haplotype shared in five patients. Journal of human genetics 69 (6) (2024)
Paniz Farshadyeganeh, Takahiro Yamada, Hirofumi Ohashi, Gen Nishimura, Hiroki Fujita, Yuriko Oishi, Misa Nunode, Shuku Ishikawa, Jun Murotsuki, Yuri Yamashita, Shiro Ikegawa, Tomoo Ogi, Eri Arikawa-Hirasawa, Kinji Ohno
Dyssegmental dysplasia Rolland-Desbuquois type is caused by pathogenic variants in HSPG2 - a founder haplotype shared in five patients. Journal of human genetics 69 (6) (2024)
Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna W Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred C O Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen, Alex Pines
The small CRL4 CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics. Nature communications 15 (1) (2024)
Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna W Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred C O Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen, Alex Pines
The small CRL4 CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics. Nature communications 15 (1) (2024)
Paniz Farshadyeganeh, Takahiro Yamada, Hirofumi Ohashi, Gen Nishimura, Hiroki Fujita, Yuriko Oishi, Misa Nunode, Shuku Ishikawa, Jun Murotsuki, Yuri Yamashita, Shiro Ikegawa, Tomoo Ogi, Eri Arikawa-Hirasawa, Kinji Ohno
Dyssegmental dysplasia Rolland-Desbuquois type is caused by pathogenic variants in HSPG2 - a founder haplotype shared in five patients. Journal of human genetics (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology 26 (5) (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology 26 (5) (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology 26 (5) (2024)
Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna W Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred C O Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen, Alex Pines
The small CRL4 CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics. Nature communications 15 (1) (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology (2024)
Paniz Farshadyeganeh, Takahiro Yamada, Hirofumi Ohashi, Gen Nishimura, Hiroki Fujita, Yuriko Oishi, Misa Nunode, Shuku Ishikawa, Jun Murotsuki, Yuri Yamashita, Shiro Ikegawa, Tomoo Ogi, Eri Arikawa-Hirasawa, Kinji Ohno
Dyssegmental dysplasia Rolland-Desbuquois type is caused by pathogenic variants in HSPG2 - a founder haplotype shared in five patients. Journal of human genetics 69 (6) (2024)
Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna W Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred C O Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen, Alex Pines
The small CRL4 CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics. Nature communications 15 (1) (2024)
Paniz Farshadyeganeh, Takahiro Yamada, Hirofumi Ohashi, Gen Nishimura, Hiroki Fujita, Yuriko Oishi, Misa Nunode, Shuku Ishikawa, Jun Murotsuki, Yuri Yamashita, Shiro Ikegawa, Tomoo Ogi, Eri Arikawa-Hirasawa, Kinji Ohno
Dyssegmental dysplasia Rolland-Desbuquois type is caused by pathogenic variants in HSPG2 - a founder haplotype shared in five patients. Journal of human genetics 69 (6) (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology 26 (5) (2024)
Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna W Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred C O Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen, Alex Pines
The small CRL4 CSA ubiquitin ligase component DDA1 regulates transcription-coupled repair dynamics. Nature communications 15 (1) (2024)
Yasuyoshi Oka, Yuka Nakazawa, Mayuko Shimada, Tomoo Ogi
Endogenous aldehyde-induced DNA-protein crosslinks are resolved by transcription-coupled repair. Nature cell biology 26 (5) (2024)
Akiko Tomita, Hiroyuki Sasanuma, Tomoo Owa, Yuka Nakazawa, Mayuko Shimada, Takahiro Fukuoka, Tomoo Ogi, Shinichiro Nakada
Inducing multiple nicks promotes interhomolog homologous recombination to correct heterozygous mutations in somatic cells. Nature communications 14 (1) (2023)
Chikako Senju, Yuka Nakazawa, Taichi Oso, Mayuko Shimada, Kana Kato, Michiko Matsuse, Mariko Tsujimoto, Taro Masaki, Yasushi Miyazaki, Satoshi Fukushima, Satoshi Tateishi, Atsushi Utani, Hiroyuki Murota, Katsumi Tanaka, Norisato Mitsutake, Shinichi Moriwaki, Chikako Nishigori, Tomoo Ogi
Deep intronic founder mutations identified in the ERCC4 / XPF gene are potential therapeutic targets for a high-frequency form of xeroderma pigmentosum. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Chikako Senju, Yuka Nakazawa, Taichi Oso, Mayuko Shimada, Kana Kato, Michiko Matsuse, Mariko Tsujimoto, Taro Masaki, Yasushi Miyazaki, Satoshi Fukushima, Satoshi Tateishi, Atsushi Utani, Hiroyuki Murota, Katsumi Tanaka, Norisato Mitsutake, Shinichi Moriwaki, Chikako Nishigori, Tomoo Ogi
Deep intronic founder mutations identified in the ERCC4 / XPF gene are potential therapeutic targets for a high-frequency form of xeroderma pigmentosum. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Chikako Senju, Yuka Nakazawa, Taichi Oso, Mayuko Shimada, Kana Kato, Michiko Matsuse, Mariko Tsujimoto, Taro Masaki, Yasushi Miyazaki, Satoshi Fukushima, Satoshi Tateishi, Atsushi Utani, Hiroyuki Murota, Katsumi Tanaka, Norisato Mitsutake, Shinichi Moriwaki, Chikako Nishigori, Tomoo Ogi
Deep intronic founder mutations identified in the ERCC4 / XPF gene are potential therapeutic targets for a high-frequency form of xeroderma pigmentosum. Proceedings of the National Academy of Sciences of the United States of America 120 (27) (2023)
Michiko Itoh, Atsushi Tamura, Sayaka Kanai, Miyako Tanaka, Yohei Kanamori, Ibuki Shirakawa, Ayaka Ito, Yasuyoshi Oka, Isao Hidaka, Taro Takami, Yasushi Honda, Mitsuyo Maeda, Yasuyuki Saito, Yoji Murata, Takashi Matozaki, Hirokazu Takahashi, Yosky Kataoka, Tomoo Ogi, Yoshihiro Ogawa, Takayoshi Suganami
Lysosomal cholesterol overload in macrophages promotes liver fibrosis in a mouse model of NASH. The Journal of experimental medicine 220 (11) (2023)
Seiji Watanabe, Yuri Murata, Yasuyoshi Oka, Kotaro Oiwa, Mai Horiuchi, Yohei Iguchi, Okiru Komine, Akira Sobue, Masahisa Katsuno, Tomoo Ogi, Koji Yamanaka
Mitochondria-associated membrane collapse impairs TBK1-mediated proteostatic stress response in ALS. Proceedings of the National Academy of Sciences of the United States of America 120 (47) (2023)
Alex Pines, Diana Llerena Schiffmacher, Shun-Hsiao Lee, Katarzyna Kliza, Arjan F Theil, Masaki Akita, Angela Helfricht, Karel Bezstarosti, Camila Gonzalo-Hansen, Haico van Attikum, Matty Verlaan-de Vries, Alfred Vertegaal, Jan H J Hoeijmakers, Jurgen A Marteijn, Hannes Lans, Jeroen A A Demmers, Michiel Vermeulen, Titia K Sixma, Tomoo Ogi, Wim Vermeulen
DDA1, a novel factor in transcription-coupled repair, modulates CRL4CSA dynamics at DNA damage-stalled RNA polymerase II. Research square (2023)
Eri Koyanagi, Yoko Kakimoto, Tamiko Minamisawa, Fumiya Yoshifuji, Toyoaki Natsume, Atsushi Higashitani, Tomoo Ogi, Antony M Carr, Masato T Kanemaki, Yasukazu Daigaku
Global landscape of replicative DNA polymerase usage in the human genome. Nature communications 13 (1) (2022)
Yana van der Weegen, Klaas de Lint, Diana van den Heuvel, Yuka Nakazawa, Tycho E T Mevissen, Janne J M van Schie, Marta San Martin Alonso, Daphne E C Boer, Román González-Prieto, Ishwarya V Narayanan, Noud H M Klaassen, Annelotte P Wondergem, Khashayar Roohollahi, Josephine C Dorsman, Yuichiro Hara, Alfred C O Vertegaal, Job de Lange, Johannes C Walter, Sylvie M Noordermeer, Mats Ljungman, Tomoo Ogi, Rob M F Wolthuis, Martijn S Luijsterburg
ELOF1 is a transcription-coupled DNA repair factor that directs RNA polymerase II ubiquitylation. Nature cell biology 23 (6) (2021)
Tadashi Nagata, Masaki Matsushita, Kenichi Mishima, Yasunari Kamiya, Kohji Kato, Miho Toyama, Tomoo Ogi, Naoki Ishiguro, Hiroshi Kitoh
Severe achondroplasia due to two de novo variants in the transmembrane domain of FGFR3 on the same allele: A case report. Molecular genetics & genomic medicine 8 (3) (2020)
Yasuyoshi Oka, Motoharu Hamada, Yuka Nakazawa, Hideki Muramatsu, Yusuke Okuno, Koichiro Higasa, Mayuko Shimada, Honoka Takeshima, Katsuhiro Hanada, Taichi Hirano, Toshiro Kawakita, Hirotoshi Sakaguchi, Takuya Ichimura, Shuichi Ozono, Kotaro Yuge, Yoriko Watanabe, Yuko Kotani, Mutsumi Yamane, Yumiko Kasugai, Miyako Tanaka, Takayoshi Suganami, Shinichiro Nakada, Norisato Mitsutake, Yuichiro Hara, Kohji Kato, Seiji Mizuno, Noriko Miyake, Yosuke Kawai, Katsushi Tokunaga, Masao Nagasaki, Seiji Kito, Keiichi Isoyama, Masafumi Onodera, Hideo Kaneko, Naomichi Matsumoto, Fumihiko Matsuda, Keitaro Matsuo, Yoshiyuki Takahashi, Tomoji Mashimo, Seiji Kojima, Tomoo Ogi
Digenic mutations in ALDH2 and ADH5 impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome. Science advances 6 (51) (2020)
Kohji Kato, Seiji Mizuno, Jenny Morton, Miho Toyama, Yuichiro Hara, Evangeline Wasmer, Alan Lehmann, Tomoo Ogi
Expanding the phenotype of biallelic loss-of-function variants in the NSUN2 gene: Description of four individuals with juvenile cataract, chronic nephritis, or brain anomaly as novel complications. American journal of medical genetics. Part A 185 (1) (2020)
Takeshi Yasuda, Wataru Kagawa, Tomoo Ogi, Takamitsu A Kato, Takehiro Suzuki, Naoshi Dohmae, Kazuya Takizawa, Yuka Nakazawa, Matthew D Genet, Mika Saotome, Michio Hama, Teruaki Konishi, Nakako Izumi Nakajima, Masaharu Hazawa, Masanori Tomita, Manabu Koike, Katsuko Noshiro, Kenichi Tomiyama, Chizuka Obara, Takaya Gotoh, Ayako Ui, Akira Fujimori, Fumiaki Nakayama, Fumio Hanaoka, Kaoru Sugasawa, Ryuichi Okayasu, Penelope A Jeggo, Katsushi Tajima
Novel function of HATs and HDACs in homologous recombination through acetylation of human RAD52 at double-strand break sites. PLoS genetics 14 (3) (2018)