Ulas Karaoz

ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 14

Top Venues

Nature microbiology

mBio

Nature communications

The ISME journal

Lawrence Berkeley National Laboratory

Boston University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Lawrence Berkeley National Laboratory

United States

Research Scientist :: Ecology

Lawrence Berkeley National Laboratory

United States

Project Scientist :: Ecology Department

Lawrence Berkeley National Laboratory

United States

Postdoctoral Fellow :: Ecology Department

Education History

Boston University

United States

PHD :: Graduate Program in Bioinformatics

Bilkent Üniversitesi Sep 01 1996 - May 31 2001

Turkey

BSC :: Electrical and Electronics Engineering

Publications

Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Johnny Hong, Ulas Karaoz, Perry de Valpine, William Fithian
To rarefy or not to rarefy: robustness and efficiency trade-offs of rarefying microbiome data. Bioinformatics (Oxford, England) 38 (9) (2022)
Christina Balle, Iyaloo N Konstantinus, Shameem Z Jaumdally, Enock Havyarimana, Katie Lennard, Rachel Esra, Shaun L Barnabas, Anna-Ursula Happel, Zoe Moodie, Katherine Gill, Tanya Pidwell, Ulas Karaoz, Eoin L Brodie, Venessa Maseko, Hoyam Gamieldien, Steven E Bosinger, Landon Myer, Linda-Gail Bekker, Jo-Ann S Passmore, Heather B Jaspan
Hormonal contraception alters vaginal microbiota and cytokines in South African adolescents in a randomized trial. Nature communications 11 (1) (2020)
Erin E Nuccio, Evan Starr, Ulas Karaoz, Eoin L Brodie, Jizhong Zhou, Susannah G Tringe, Rex R Malmstrom, Tanja Woyke, Jillian F Banfield, Mary K Firestone, Jennifer Pett-Ridge
Niche differentiation is spatially and temporally regulated in the rhizosphere. The ISME journal 14 (4) (2020)
Javier A Ceja-Navarro, Ulas Karaoz, Markus Bill, Zhao Hao, Richard A White, Abelardo Arellano, Leila Ramanculova, Timothy R Filley, Timothy D Berry, Mark E Conrad, Meredith Blackwell, Carrie D Nicora, Young-Mo Kim, Patrick N Reardon, Mary S Lipton, Joshua N Adkins, Jennifer Pett-Ridge, Eoin L Brodie
Gut anatomical properties and microbial functional assembly promote lignocellulose deconstruction and colony subsistence of a wood-feeding beetle. Nature microbiology 4 (5) (2019)
Alexander B Chase, Philip Arevalo, Eoin L Brodie, Martin F Polz, Ulas Karaoz, Jennifer B H Martiny
Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria. mBio 10 (5) (2019)
Ulas Karaoz, Estelle Couradeau, Ulisses Nunes da Rocha, Hsiao-Chien Lim, Trent Northen, Ferran Garcia-Pichel, Eoin L Brodie
Large Blooms of Bacillales (Firmicutes) Underlie the Response to Wetting of Cyanobacterial Biocrusts at Various Stages of Maturity. mBio 9 (2) (2018)
Tami L Swenson, Ulas Karaoz, Joel M Swenson, Benjamin P Bowen, Trent R Northen
Linking soil biology and chemistry in biological soil crust using isolate exometabolomics. Nature communications 9 (1) (2018)
Kateryna Zhalnina, Katherine B Louie, Zhao Hao, Nasim Mansoori, Ulisses Nunes da Rocha, Shengjing Shi, Heejung Cho, Ulas Karaoz, Dominique Loqué, Benjamin P Bowen, Mary K Firestone, Trent R Northen, Eoin L Brodie
Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly. Nature microbiology 3 (4) (2018)
Alexander B Chase, Ulas Karaoz, Eoin L Brodie, Zulema Gomez-Lunar, Adam C Martiny, Jennifer B H Martiny
Microdiversity of an Abundant Terrestrial Bacterium Encompasses Extensive Variation in Ecologically Relevant Traits. mBio 8 (6) (2017)

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Publication Activity (10 Years)

Top Topics

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Ulas Karaoz