Susannah G Tringe (Susannah Tringe)

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2015-2024
Publications (10 Years): 59

Top Venues

Lawrence Berkeley National Laboratory

Stanford University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Lawrence Berkeley National Laboratory

United States

Senior Scientist :: Environmental Genomics and Systems Biology

DOE Joint Genome Institute

United States

Deputy for User Programs

Education History

Stanford University Sep 01 1994 - Dec 15 2000

United States

PHD :: Biophysics

Publications

Yaoming Li, Yaxin Xue, Taniya Roy Chowdhury, David E Graham, Susannah G Tringe, Janet K Jansson, Neslihan Taş
Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost. mSphere (2024)
Antarpreet S Jutla, Gabriel M Filippelli, Katherine D McMahon, Susannah G Tringe, Rita R Colwell, Helen Nguyen, Michael J Imperiale
One Health, climate change, and infectious microbes: a joint effort between AGU and ASM to understand impacts of changing climate and microbes on human well-being across scales. mSphere (2024)
Antarpreet S Jutla, Gabriel M Filippelli, Katherine D McMahon, Susannah G Tringe, Rita R Colwell, Helen Nguyen, Michael J Imperiale
One Health, climate change, and infectious microbes: a joint effort between AGU and ASM to understand impacts of changing climate and microbes on human well-being across scales. mSphere 9 (2) (2024)
Yaoming Li, Yaxin Xue, Taniya Roy Chowdhury, David E Graham, Susannah G Tringe, Janet K Jansson, Neslihan Taş
Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost. mSphere 9 (7) (2024)
Wyatt H Hartman, Clifton P Bueno de Mesquita, Susanna M Theroux, Connor Morgan-Lang, Dennis D Baldocchi, Susannah G Tringe
Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient. mSystems 9 (1) (2024)
Antarpreet S Jutla, Gabriel M Filippelli, Katherine D McMahon, Susannah G Tringe, Rita R Colwell, Helen Nguyen, Michael J Imperiale
One Health, climate change, and infectious microbes: a joint effort between AGU and ASM to understand impacts of changing climate and microbes on human well-being across scales. mSphere (2024)
Yaoming Li, Yaxin Xue, Taniya Roy Chowdhury, David E Graham, Susannah G Tringe, Janet K Jansson, Neslihan Taş
Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost. mSphere 9 (7) (2024)
Wyatt H Hartman, Clifton P Bueno de Mesquita, Susanna M Theroux, Connor Morgan-Lang, Dennis D Baldocchi, Susannah G Tringe
Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient. mSystems 9 (1) (2024)
Wyatt H Hartman, Clifton P Bueno de Mesquita, Susanna M Theroux, Connor Morgan-Lang, Dennis D Baldocchi, Susannah G Tringe
Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient. mSystems (2024)
Antarpreet S Jutla, Gabriel M Filippelli, Katherine D McMahon, Susannah G Tringe, Rita R Colwell, Helen Nguyen, Michael J Imperiale
One Health, climate change, and infectious microbes: a joint effort between AGU and ASM to understand impacts of changing climate and microbes on human well-being across scales. mSphere 9 (2) (2024)
Wyatt H Hartman, Clifton P Bueno de Mesquita, Susanna M Theroux, Connor Morgan-Lang, Dennis D Baldocchi, Susannah G Tringe
Multiple microbial guilds mediate soil methane cycling along a wetland salinity gradient. mSystems 9 (1) (2024)
Yaoming Li, Yaxin Xue, Taniya Roy Chowdhury, David E Graham, Susannah G Tringe, Janet K Jansson, Neslihan Taş
Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost. mSphere 9 (7) (2024)
Antarpreet S Jutla, Gabriel M Filippelli, Katherine D McMahon, Susannah G Tringe, Rita R Colwell, Helen Nguyen, Michael J Imperiale
One Health, climate change, and infectious microbes: a joint effort between AGU and ASM to understand impacts of changing climate and microbes on human well-being across scales. mSphere 9 (2) (2024)
Clifton P Bueno de Mesquita, Dongying Wu, Susannah G Tringe
Methyl-Based Methanogenesis: an Ecological and Genomic Review. Microbiology and molecular biology reviews : MMBR 87 (1) (2023)
Yen Ning Chai, Yunhui Qi, Emily Goren, Dawn Chiniquy, Amy M Sheflin, Susannah G Tringe, Jessica E Prenni, Peng Liu, Daniel P Schachtman
Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum. mSystems 9 (1) (2023)
Yen Ning Chai, Yunhui Qi, Emily Goren, Dawn Chiniquy, Amy M Sheflin, Susannah G Tringe, Jessica E Prenni, Peng Liu, Daniel P Schachtman
Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum. mSystems 9 (1) (2023)
Mingsheng Qi, Jeffrey C Berry, Kira W Veley, Lily O'Connor, Omri M Finkel, Isai Salas-González, Molly A Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina Del Rio, Cody Creech, Peng Liu, Susannah G Tringe, Jeffery L Dangl, Daniel P Schachtman, Rebecca S Bart
Correction: Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons. The ISME journal (2023)
Clifton P Bueno de Mesquita, Dongying Wu, Susannah G Tringe
Methyl-Based Methanogenesis: an Ecological and Genomic Review. Microbiology and molecular biology reviews : MMBR (2023)
Qing Zheng, Yuntao Hu, Suzanne M Kosina, Marc W Van Goethem, Susannah G Tringe, Benjamin P Bowen, Trent R Northen
Conservation of beneficial microbes between the rhizosphere and the cyanosphere. The New phytologist (2023)
Yen Ning Chai, Yunhui Qi, Emily Goren, Dawn Chiniquy, Amy M Sheflin, Susannah G Tringe, Jessica E Prenni, Peng Liu, Daniel P Schachtman
Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum. mSystems 9 (1) (2023)
Clifton P Bueno de Mesquita, Dongying Wu, Susannah G Tringe
Methyl-Based Methanogenesis: an Ecological and Genomic Review. Microbiology and molecular biology reviews : MMBR 87 (1) (2023)
Clifton P Bueno de Mesquita, Dongying Wu, Susannah G Tringe
Methyl-Based Methanogenesis: an Ecological and Genomic Review. Microbiology and molecular biology reviews : MMBR 87 (1) (2023)
Yen Ning Chai, Yunhui Qi, Emily Goren, Dawn Chiniquy, Amy M Sheflin, Susannah G Tringe, Jessica E Prenni, Peng Liu, Daniel P Schachtman
Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum. mSystems (2023)
Clifton P Bueno de Mesquita, Dongying Wu, Susannah G Tringe
Methyl-Based Methanogenesis: an Ecological and Genomic Review. Microbiology and molecular biology reviews : MMBR (2023)
Igor Brown, Tanja Woyke, Natalia Ivanova, Nicole Shapiro, Jaime Alcorta, Andrei Chistoserdov, Donald Pan, Svetlana Sarkisova, Susannah G Tringe
High-Quality Draft Genome Sequence of Fischerella thermalis JSC-11, a Siderophilic Cyanobacterium with Bioremediation Potential. Microbiology resource announcements 11 (11) (2022)
Susannah G Tringe
A toolkit for microbial community editing. Nature reviews. Microbiology 20 (7) (2022)
Elle M Barnes, Susannah G Tringe
Exploring the roles of microbes in facilitating plant adaptation to climate change. The Biochemical journal 479 (3) (2022)
Clifton P Bueno de Mesquita, Jinglie Zhou, Susanna Theroux, Susannah G Tringe
Correction: Bueno de Mesquita et al. Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns. Genes 2022, 13 , 148. Genes 13 (3) (2022)
Clifton P Bueno de Mesquita, Jinglie Zhou, Susanna Theroux, Susannah G Tringe
Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns. Genes 13 (1) (2022)
Mingsheng Qi, Jeffrey C Berry, Kira W Veley, Lily O'Connor, Omri M Finkel, Isai Salas-González, Molly A Kuhs, Julietta Jupe, Emily Holcomb, Tijana Glavina Del Rio, Cody Creech, Peng Liu, Susannah G Tringe, Jeffery L Dangl, Daniel P Schachtman, Rebecca S Bart
Identification of beneficial and detrimental bacteria impacting sorghum responses to drought using multi-scale and multi-system microbiome comparisons. The ISME journal 16 (8) (2022)
Jinglie Zhou, Susanna M Theroux, Clifton P Bueno de Mesquita, Wyatt H Hartman, Ye Tian, Susannah G Tringe
Microbial drivers of methane emissions from unrestored industrial salt ponds. The ISME journal (2021)
Benjamin J Cole, Susannah G Tringe
Different threats, same response. Nature plants 7 (5) (2021)
Kara Martin, Katrin Schmidt, Andrew Toseland, Chris A Boulton, Kerrie Barry, Bánk Beszteri, Corina P D Brussaard, Alicia Clum, Christopher Daum, Emiley A Eloe-Fadrosh, Allison Fong, Brian Foster, Bryce Foster, Michael Ginzburg, Marcel Huntemann, Natalia N Ivanova, Nikos C Kyrpides, Erika Lindquist, Supratim Mukherjee, Krishnaveni Palaniappan, T B K Reddy, Mariam R Rizkallah, Simon Roux, Klaas Timmermans, Susannah G Tringe, Willem H van de Poll, Neha Varghese, Klaus U Valentin, Timothy M Lenton, Igor V Grigoriev, Richard M Leggett, Vincent Moulton, Thomas Mock
The biogeographic differentiation of algal microbiomes in the upper ocean from pole to pole. Nature communications 12 (1) (2021)
Clifton P Bueno de Mesquita, Jinglie Zhou, Susanna M Theroux, Susannah G Tringe
Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern. Genes 12 (10) (2021)
Live Heldal Hagen, Charles G Brooke, Claire A Shaw, Angela D Norbeck, Hailan Piao, Magnus Øverlie Arntzen, Heather M Brewer, Alex Copeland, Nancy Isern, Anil Shukla, Simon Roux, Vincent Lombard, Bernard Henrissat, Michelle A OʼMalley, Igor V Grigoriev, Susannah G Tringe, Roderick I Mackie, Ljiljana Pasa-Tolic, Phillip Byron Pope, Matthias Hess
Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber. The ISME journal 15 (2) (2020)
Stephen Nayfach, Simon Roux, Rekha Seshadri, Daniel W Udwary, Neha Varghese, Frederik Schulz, Dongying Wu, A David Páez-Espino, I-Min A Chen, Marcel Huntemann, Krishna Palaniappan, Joshua Ladau, Supratim Mukherjee, T B K Reddy, Torben Nielsen, Edward Kirton, José P Faria, Janaka N Edirisinghe, Christopher S Henry, Sean P Jungbluth, Dylan Chivian, Paramvir Dehal, Elisha M Wood-Charlson, Adam P Arkin, Susannah G Tringe, Axel Visel, null null, Tanja Woyke, Nigel J Mouncey, Natalia N Ivanova, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
Publisher Correction: A genomic catalog of Earth's microbiomes. Nature biotechnology (2020)
Pankaj Trivedi, Jan E Leach, Susannah G Tringe, Tong-Min Sa, Brajesh K Singh
Plant-microbiome interactions: from community assembly to plant health. Nature reviews. Microbiology 18 (11) (2020)
Erin E Nuccio, Evan Starr, Ulas Karaoz, Eoin L Brodie, Jizhong Zhou, Susannah G Tringe, Rex R Malmstrom, Tanja Woyke, Jillian F Banfield, Mary K Firestone, Jennifer Pett-Ridge
Niche differentiation is spatially and temporally regulated in the rhizosphere. The ISME journal 14 (4) (2020)
Stephen Nayfach, Simon Roux, Rekha Seshadri, Daniel W Udwary, Neha Varghese, Frederik Schulz, Dongying Wu, A David Páez-Espino, I-Min A Chen, Marcel Huntemann, Krishna Palaniappan, Joshua Ladau, Supratim Mukherjee, T B K Reddy, Torben Nielsen, Edward Kirton, José P Faria, Janaka N Edirisinghe, Christopher S Henry, Sean P Jungbluth, Dylan Chivian, Paramvir Dehal, Elisha M Wood-Charlson, Adam P Arkin, Susannah G Tringe, Axel Visel, null null, Tanja Woyke, Nigel J Mouncey, Natalia N Ivanova, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
A genomic catalog of Earth's microbiomes. Nature biotechnology 39 (4) (2020)
Aaron P Mitchell, Ira J Blader, Patricia A Bradford, Sarah E F D'Orazio, W Paul Duprex, Craig D Ellermeier, Ana Fernandez Sesma, Michael J Imperiale, Katherine D McMahon, Marcela F Pasetti, Susannah G Tringe
mSphere of Influence: the View from the Microbiologists of the Future. mSphere 4 (3) (2019)
Hao Zheng, Julie Perreau, J Elijah Powell, Benfeng Han, Zi-Jing Zhang, Waldan K Kwong, Susannah G Tringe, Nancy A Moran
Division of labor in honey bee gut microbiota for plant polysaccharide digestion. Proceedings of the National Academy of Sciences of the United States of America 116 (51) (2019)
Simon Roux, Evelien M Adriaenssens, Bas E Dutilh, Eugene V Koonin, Andrew M Kropinski, Mart Krupovic, Jens H Kuhn, Rob Lavigne, J Rodney Brister, Darren P Martin, Clara Amid, Ramy K Aziz, Seth R Bordenstein, Peer Bork, Mya Breitbart, Guy R Cochrane, Rebecca A Daly, Christelle Desnues, Melissa B Duhaime, Joanne B Emerson, François Enault, Jed A Fuhrman, Pascal Hingamp, Philip Hugenholtz, Bonnie L Hurwitz, Natalia N Ivanova, Jessica M Labonté, Kyung-Bum Lee, Rex R Malmstrom, Manuel Martinez-Garcia, Ilene Karsch Mizrachi, Hiroyuki Ogata, A David Páez-Espino, Marie-Agnès Petit, Catherine Putonti, Thomas Rattei, Alejandro Reyes, Francisco Rodriguez-Valera, Karyna Rosario, Lynn Schriml, Frederik Schulz, Grieg F Steward, Matthew B Sullivan, Shinichi Sunagawa, Curtis A Suttle, Ben Temperton, Susannah G Tringe, Rebecca Vega Thurber, Nicole Suzanne Webster, Katrine L Whiteson, Steven W Wilhelm, K Eric Wommack, Tanja Woyke, Kelly C Wrighton, Pelin Yilmaz, Takashi Yoshida, Mark J Young, Natalya Yutin, Lisa Zeigler Allen, Nikos C Kyrpides, Emiley A Eloe-Fadrosh
Minimum Information about an Uncultivated Virus Genome (MIUViG). Nature biotechnology 37 (1) (2018)
Qiuming Yao, Zhou Li, Yang C Song, S Joseph Wright, Xuan Guo, Susannah G Tringe, Malak M Tfaily, Ljiljana Paša-Tolić, Terry C Hazen, Benjamin L Turner, Melanie A Mayes, Chongle Pan
Community proteogenomics reveals the systemic impact of phosphorus availability on microbial functions in tropical soil. Nature ecology & evolution 2 (3) (2018)
William A Walters, Zhao Jin, Nicholas Youngblut, Jason G Wallace, Jessica Sutter, Wei Zhang, Antonio González-Peña, Jason Peiffer, Omry Koren, Qiaojuan Shi, Rob Knight, Tijana Glavina Del Rio, Susannah G Tringe, Edward S Buckler, Jeffery L Dangl, Ruth E Ley
Large-scale replicated field study of maize rhizosphere identifies heritable microbes. Proceedings of the National Academy of Sciences of the United States of America 115 (28) (2018)
Christian M K Sieber, Alexander J Probst, Allison Sharrar, Brian C Thomas, Matthias Hess, Susannah G Tringe, Jillian F Banfield
Recovery of genomes from metagenomes via a dereplication, aggregation and scoring strategy. Nature microbiology 3 (7) (2018)
Harry R Beller, Andria V Rodrigues, Kamrun Zargar, Yu-Wei Wu, Avneesh K Saini, Renee M Saville, Jose H Pereira, Paul D Adams, Susannah G Tringe, Christopher J Petzold, Jay D Keasling
Discovery of enzymes for toluene synthesis from anoxic microbial communities. Nature chemical biology 14 (5) (2018)
Bela Hausmann, Claus Pelikan, Craig W Herbold, Stephan Köstlbacher, Mads Albertsen, Stephanie A Eichorst, Tijana Glavina Del Rio, Martin Huemer, Per Halkjaer Nielsen, Thomas Rattei, Ulrich Stingl, Susannah G Tringe, Daniela Trojan, Cecilia Wentrup, Dagmar Woebken, Michael Pester, Alexander Loy
Peatland Acidobacteria with a dissimilatory sulfur metabolism. The ISME journal 12 (7) (2018)
Susannah G Tringe
Single-cell genomics for the masses. Nature biotechnology 35 (7) (2018)
Neslihan Taş, Emmanuel Prestat, Shi Wang, Yuxin Wu, Craig Ulrich, Timothy Kneafsey, Susannah G Tringe, Margaret S Torn, Susan S Hubbard, Janet K Jansson
Landscape topography structures the soil microbiome in arctic polygonal tundra. Nature communications 9 (1) (2018)
Wyatt H Hartman, Rongzhong Ye, William R Horwath, Susannah G Tringe
A genomic perspective on stoichiometric regulation of soil carbon cycling. The ISME journal 11 (12) (2017)
Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas, Miranda Harmon-Smith, Devin Doud, T B K Reddy, Frederik Schulz, Jessica Jarett, Adam R Rivers, Emiley A Eloe-Fadrosh, Susannah G Tringe, Natalia N Ivanova, Alex Copeland, Alicia Clum, Eric D Becraft, Rex R Malmstrom, Bruce Birren, Mircea Podar, Peer Bork, George M Weinstock, George M Garrity, Jeremy A Dodsworth, Shibu Yooseph, Granger G Sutton, Frank O Glöckner, Jack A Gilbert, William C Nelson, Steven J Hallam, Sean P Jungbluth, Thijs J G Ettema, Scott Tighe, Konstantinos T Konstantinidis, Wen-Tso Liu, Brett J Baker, Thomas Rattei, Jonathan A Eisen, Brian Hedlund, Katherine D McMahon, Noah Fierer, Rob Knight, Rob Finn, Guy Cochrane, Ilene Karsch-Mizrachi, Gene W Tyson, Christian Rinke, null null, Alla L Lapidus, Folker Meyer, Pelin Yilmaz, Donovan H Parks, A Murat Eren, Lynn Schriml, Jillian F Banfield, Philip Hugenholtz, Tanja Woyke
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea. Nature biotechnology 35 (8) (2017)
Sarahi L Garcia, Sarah L R Stevens, Benjamin Crary, Manuel Martinez-Garcia, Ramunas Stepanauskas, Tanja Woyke, Susannah G Tringe, Siv G E Andersson, Stefan Bertilsson, Rex R Malmstrom, Katherine D McMahon
Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations. The ISME journal 12 (3) (2017)
Asaf Levy, Isai Salas Gonzalez, Maximilian Mittelviefhaus, Scott Clingenpeel, Sur Herrera Paredes, Jiamin Miao, Kunru Wang, Giulia Devescovi, Kyra Stillman, Freddy Monteiro, Bryan Rangel Alvarez, Derek S Lundberg, Tse-Yuan Lu, Sarah Lebeis, Zhao Jin, Meredith McDonald, Andrew P Klein, Meghan E Feltcher, Tijana Glavina Rio, Sarah R Grant, Sharon Lafferty Doty, Ruth E Ley, Bingyu Zhao, Vittorio Venturi, Dale A Pelletier, Julia A Vorholt, Susannah G Tringe, Tanja Woyke, Jeffery L Dangl
Genomic features of bacterial adaptation to plants. Nature genetics 50 (1) (2017)
Matthew L Bendall, Sarah Lr Stevens, Leong-Keat Chan, Stephanie Malfatti, Patrick Schwientek, Julien Tremblay, Wendy Schackwitz, Joel Martin, Amrita Pati, Brian Bushnell, Jeff Froula, Dongwan Kang, Susannah G Tringe, Stefan Bertilsson, Mary Ann Moran, Ashley Shade, Ryan J Newton, Katherine D McMahon, Rex R Malmstrom
Genome-wide selective sweeps and gene-specific sweeps in natural bacterial populations. The ISME journal 10 (7) (2016)
Bela Hausmann, Klaus-Holger Knorr, Katharina Schreck, Susannah G Tringe, Tijana Glavina Del Rio, Alexander Loy, Michael Pester
Consortia of low-abundance bacteria drive sulfate reduction-dependent degradation of fermentation products in peat soil microcosms. The ISME journal 10 (10) (2016)
Maggie R Wagner, Derek S Lundberg, Tijana G Del Rio, Susannah G Tringe, Jeffery L Dangl, Thomas Mitchell-Olds
Host genotype and age shape the leaf and root microbiomes of a wild perennial plant. Nature communications 7 (2016)
Ben O Oyserman, Daniel R Noguera, Tijana Glavina del Rio, Susannah G Tringe, Katherine D McMahon
Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis. The ISME journal 10 (4) (2015)
Jacob P Beam, Zackary J Jay, Markus C Schmid, Douglas B Rusch, Margaret F Romine, Ryan de M Jennings, Mark A Kozubal, Susannah G Tringe, Michael Wagner, William P Inskeep
Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous 'streamer' community. The ISME journal 10 (1) (2015)
Birgit Luef, Kyle R Frischkorn, Kelly C Wrighton, Hoi-Ying N Holman, Giovanni Birarda, Brian C Thomas, Andrea Singh, Kenneth H Williams, Cristina E Siegerist, Susannah G Tringe, Kenneth H Downing, Luis R Comolli, Jillian F Banfield
Diverse uncultivated ultra-small bacterial cells in groundwater. Nature communications 6 (2015)

Susannah G Tringe.css-eqlu8i{font-size:small;padding-left:4px;} (Susannah Tringe)

Publication Activity (10 Years)

Top Topics

Top Venues

Susannah G Tringe (Susannah Tringe)