Jennifer Pett-Ridge (J Pett-Ridge)

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 61

Top Topics

Microbial Community

Arabidopsis Thaliana

Top Venues

The ISME journal

ISME communications

Nature microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Peter F Chuckran, Katerina Estera-Molina, Marcel Huntemann, Brian Foster, Simon Roux, Supratim Mukherjee, Patrick Hajek, T B K Reddy, Christopher Daum, I-Min A Chen, Christa Pennacchio, Emiley A Eloe-Fadrosh, Paul Dijkstra, Mary K Firestone, Steven J Blazewicz, Jennifer Pett-Ridge
Metatranscriptomes of California grassland soil microbial communities in response to rewetting. Microbiology resource announcements 13 (6) (2024)
Nicole DiDonato, Albert Rivas-Ubach, William R Kew, Noah W Sokol, Chaevien S Clendinen, Jennifer E Kyle, Carmen Enid Martínez, Megan M Foley, Nikola Tolić, Jennifer Pett-Ridge, Ljiljana Paša-Tolić
Improved Characterization of Soil Organic Matter by Integrating FT-ICR MS, Liquid Chromatography Tandem Mass Spectrometry, and Molecular Networking: A Case Study of Root Litter Decay under Drought Conditions. Analytical chemistry 96 (29) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology (2024)
Megan M Foley, Bram W G Stone, Tristan A Caro, Noah W Sokol, Benjamin J Koch, Steven J Blazewicz, Paul Dijkstra, Michaela Hayer, Kirsten S Hofmockel, Brianna K Finley, Michelle Mack, Jane Marks, Rebecca L Mau, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Alicia M Purcell, Egbert Schwartz, Jennifer Pett-Ridge, Noah Fierer, Bruce A Hungate
Growth rate as a link between microbial diversity and soil biogeochemistry. Nature ecology & evolution (2024)
Peter F Chuckran, Katerina Estera-Molina, Marcel Huntemann, Brian Foster, Simon Roux, Supratim Mukherjee, Patrick Hajek, T B K Reddy, Christopher Daum, I-Min A Chen, Christa Pennacchio, Emiley A Eloe-Fadrosh, Paul Dijkstra, Mary K Firestone, Steven J Blazewicz, Jennifer Pett-Ridge
Metatranscriptomes of California grassland soil microbial communities in response to rewetting. Microbiology resource announcements (2024)
Peter F Chuckran, Katerina Estera-Molina, Marcel Huntemann, Brian Foster, Simon Roux, Supratim Mukherjee, Patrick Hajek, T B K Reddy, Christopher Daum, I-Min A Chen, Christa Pennacchio, Emiley A Eloe-Fadrosh, Paul Dijkstra, Mary K Firestone, Steven J Blazewicz, Jennifer Pett-Ridge
Metatranscriptomes of California grassland soil microbial communities in response to rewetting. Microbiology resource announcements 13 (6) (2024)
Peter F Chuckran, Katerina Estera-Molina, Marcel Huntemann, Brian Foster, Simon Roux, Supratim Mukherjee, Patrick Hajek, T B K Reddy, Christopher Daum, I-Min A Chen, Christa Pennacchio, Emiley A Eloe-Fadrosh, Paul Dijkstra, Mary K Firestone, Steven J Blazewicz, Jennifer Pett-Ridge
Metatranscriptomes of California grassland soil microbial communities in response to rewetting. Microbiology resource announcements 13 (6) (2024)
Anne Kakouridis, Mengting Maggie Yuan, Erin E Nuccio, John A Hagen, Christina A Fossum, Madeline L Moore, Katerina Y Estera-Molina, Peter S Nico, Peter K Weber, Jennifer Pett-Ridge, Mary K Firestone
Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter. The New phytologist (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Gianna L Marschmann, Jinyun Tang, Kateryna Zhalnina, Ulas Karaoz, Heejung Cho, Beatrice Le, Jennifer Pett-Ridge, Eoin L Brodie
Predictions of rhizosphere microbiome dynamics with a genome-informed and trait-based energy budget model. Nature microbiology 9 (2) (2024)
Anne Kakouridis, Mengting Maggie Yuan, Erin E Nuccio, John A Hagen, Christina A Fossum, Madeline L Moore, Katerina Y Estera-Molina, Peter S Nico, Peter K Weber, Jennifer Pett-Ridge, Mary K Firestone
Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter. The New phytologist (2024)
Anne Kakouridis, Mengting Maggie Yuan, Erin E Nuccio, John A Hagen, Christina A Fossum, Madeline L Moore, Katerina Y Estera-Molina, Peter S Nico, Peter K Weber, Jennifer Pett-Ridge, Mary K Firestone
Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter. The New phytologist 242 (4) (2024)
Nicole DiDonato, Albert Rivas-Ubach, William R Kew, Noah W Sokol, Chaevien S Clendinen, Jennifer E Kyle, Carmen Enid Martínez, Megan M Foley, Nikola Tolić, Jennifer Pett-Ridge, Ljiljana Paša-Tolić
Improved Characterization of Soil Organic Matter by Integrating FT-ICR MS, Liquid Chromatography Tandem Mass Spectrometry, and Molecular Networking: A Case Study of Root Litter Decay under Drought Conditions. Analytical chemistry (2024)
Bram W G Stone, Paul Dijkstra, Brianna K Finley, Raina Fitzpatrick, Megan M Foley, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Junhui Li, Xiao-Jun Allen Liu, Ayla Martinez, Rebecca L Mau, Jane Marks, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Jennifer Pett-Ridge, Alicia M Purcell, Egbert Schwartz, Bruce A Hungate
Life history strategies among soil bacteria-dichotomy for few, continuum for many. The ISME journal 17 (4) (2023)
Marike Palmer, Jonathan K Covington, En-Min Zhou, Scott C Thomas, Neeli Habib, Cale O Seymour, Dengxun Lai, Juliet Johnston, Ameena Hashimi, Jian-Yu Jiao, Alise R Muok, Lan Liu, Wen-Dong Xian, Xiao-Yang Zhi, Meng-Meng Li, Leslie P Silva, Benjamin P Bowen, Katherine Louie, Ariane Briegel, Jennifer Pett-Ridge, Peter K Weber, Elitza I Tocheva, Tanja Woyke, Trent R Northen, Xavier Mayali, Wen-Jun Li, Brian P Hedlund
Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past. The ISME journal (2023)
Georgios A Pavlopoulos, Fotis A Baltoumas, Sirui Liu, Oguz Selvitopi, Antonio Pedro Camargo, Stephen Nayfach, Ariful Azad, Simon Roux, Lee Call, Natalia N Ivanova, I Min Chen, A David Páez-Espino, Evangelos Karatzas, null null, Ioannis Iliopoulos, Konstantinos T Konstantinidis, James M Tiedje, Jennifer Pett-Ridge, Julien S Baker, Axel Visel, Christos A Ouzounis, Sergey Ovchinnikov, Aydın Buluç, Nikos C Kyrpides
Unraveling the functional dark matter through global metagenomics. Nature (2023)
Bram W G Stone, Paul Dijkstra, Brianna K Finley, Raina Fitzpatrick, Megan M Foley, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Junhui Li, Xiao-Jun Allen Liu, Ayla Martinez, Rebecca L Mau, Jane Marks, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Jennifer Pett-Ridge, Alicia M Purcell, Egbert Schwartz, Bruce A Hungate
Life history strategies among soil bacteria-dichotomy for few, continuum for many. The ISME journal 17 (4) (2023)
Robert Riley, Robert M Bowers, Antonio Pedro Camargo, Ashley Campbell, Rob Egan, Emiley A Eloe-Fadrosh, Brian Foster, Steven Hofmeyr, Marcel Huntemann, Matthew Kellom, Jeffrey A Kimbrel, Leonid Oliker, Katherine Yelick, Jennifer Pett-Ridge, Asaf Salamov, Neha J Varghese, Alicia Clum
Terabase-Scale Coassembly of a Tropical Soil Microbiome. Microbiology spectrum (2023)
Christian Santos-Medellin, Steven J Blazewicz, Jennifer Pett-Ridge, Mary K Firestone, Joanne B Emerson
Viral but not bacterial community successional patterns reflect extreme turnover shortly after rewetting dry soils. Nature ecology & evolution (2023)
François Maillard, Talia J Michaud, Craig R See, Lang C DeLancey, Steven J Blazewicz, Jeffrey A Kimbrel, Jennifer Pett-Ridge, Peter G Kennedy
Melanization slows the rapid movement of fungal necromass carbon and nitrogen into both bacterial and fungal decomposer communities and soils. mSystems (2023)
Dariia Vyshenska, Pranav Sampara, Kanwar Singh, Andy Tomatsu, W Berkeley Kauffman, Erin E Nuccio, Steven J Blazewicz, Jennifer Pett-Ridge, Katherine B Louie, Neha Varghese, Matthew Kellom, Alicia Clum, Robert Riley, Simon Roux, Emiley A Eloe-Fadrosh, Ryan M Ziels, Rex R Malmstrom
A standardized quantitative analysis strategy for stable isotope probing metagenomics. mSystems (2023)
Bram W G Stone, Paul Dijkstra, Brianna K Finley, Raina Fitzpatrick, Megan M Foley, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Junhui Li, Xiao-Jun Allen Liu, Ayla Martinez, Rebecca L Mau, Jane Marks, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Jennifer Pett-Ridge, Alicia M Purcell, Egbert Schwartz, Bruce A Hungate
Life history strategies among soil bacteria-dichotomy for few, continuum for many. The ISME journal (2023)
Ella T Sieradzki, Erin E Nuccio, Jennifer Pett-Ridge, Mary K Firestone
Correction to: Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass. The ISME journal (2023)
Ella T Sieradzki, Erin E Nuccio, Jennifer Pett-Ridge, Mary K Firestone
Expression of macromolecular organic nitrogen degrading enzymes identifies potential mediators of soil organic N availability to an annual grass. The ISME journal (2023)
Alexa M Nicolas, Ella T Sieradzki, Jennifer Pett-Ridge, Jillian F Banfield, Michiko E Taga, Mary K Firestone, Steven J Blazewicz
A subset of viruses thrives following microbial resuscitation during rewetting of a seasonally dry California grassland soil. Nature communications 14 (1) (2023)
Ella T Sieradzki, Erin E Nuccio, Jennifer Pett-Ridge, Mary K Firestone
Rhizosphere and detritusphere habitats modulate expression of soil N-cycling genes during plant development. mSystems (2023)
Bram W G Stone, Paul Dijkstra, Brianna K Finley, Raina Fitzpatrick, Megan M Foley, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Junhui Li, Xiao-Jun Allen Liu, Ayla Martinez, Rebecca L Mau, Jane Marks, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Jennifer Pett-Ridge, Alicia M Purcell, Egbert Schwartz, Bruce A Hungate
Life history strategies among soil bacteria-dichotomy for few, continuum for many. The ISME journal 17 (4) (2023)
Jeth G V Walkup, Chansotheary Dang, Rebecca L Mau, Michaela Hayer, Egbert Schwartz, Bram W Stone, Kirsten S Hofmockel, Benjamin J Koch, Alicia M Purcell, Jennifer Pett-Ridge, Chao Wang, Bruce A Hungate, Ember M Morrissey
The predictive power of phylogeny on growth rates in soil bacterial communities. ISME communications 3 (1) (2023)
Bram W G Stone, Paul Dijkstra, Brianna K Finley, Raina Fitzpatrick, Megan M Foley, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Junhui Li, Xiao-Jun Allen Liu, Ayla Martinez, Rebecca L Mau, Jane Marks, Victoria Monsaint-Queeney, Ember M Morrissey, Jeffrey Propster, Jennifer Pett-Ridge, Alicia M Purcell, Egbert Schwartz, Bruce A Hungate
Life history strategies among soil bacteria-dichotomy for few, continuum for many. The ISME journal (2023)
Jennifer Pett-Ridge, Peter K Weber
NanoSIP: NanoSIMS Applications for Microbial Biology. Methods in molecular biology (Clifton, N.J.) 2349 (2022)
Anne Kakouridis, John A Hagen, Megan P Kan, Stefania Mambelli, Lewis J Feldman, Donald J Herman, Peter K Weber, Jennifer Pett-Ridge, Mary K Firestone
Routes to roots: direct evidence of water transport by arbuscular mycorrhizal fungi to host plants. The New phytologist 236 (1) (2022)
Rachel Hestrin, Megan Kan, Marissa Lafler, Jessica R Wollard, Jeffrey A Kimbrel, Prasun Ray, Steven J Blazewicz, Rhona K Stuart, Kelly Craven, Mary Firestone, Erin E Nuccio, Jennifer Pett-Ridge
Plant-associated fungi support bacterial resilience following water limitation. The ISME journal 16 (12) (2022)
Eric W Slessarev, Allegra C Mayer, Courtland Kelly, Katerina Georgiou, Jennifer Pett-Ridge, Erin E Nuccio
Initial soil organic carbon stocks govern changes in soil carbon: Reality or artifact? Global change biology (2022)
Janghyuk Lee, Rachel Hestrin, Erin E Nuccio, Keith D Morrison, Christina E Ramon, Ty J Samo, Jennifer Pett-Ridge, Sonny S Ly, Ted A Laurence, Peter K Weber
Label-Free Multiphoton Imaging of Microbes in Root, Mineral, and Soil Matrices with Time-Gated Coherent Raman and Fluorescence Lifetime Imaging. Environmental science & technology 56 (3) (2022)
Alex Greenlon, Ella Sieradzki, Olivier Zablocki, Benjamin J Koch, Megan M Foley, Jeffrey A Kimbrel, Bruce A Hungate, Steven J Blazewicz, Erin E Nuccio, Christine L Sun, Aaron Chew, Cynthia-Jeanette Mancilla, Matthew B Sullivan, Mary K Firestone, Jennifer Pett-Ridge, Jillian F Banfield
Quantitative Stable-Isotope Probing (qSIP) with Metagenomics Links Microbial Physiology and Activity to Soil Moisture in Mediterranean-Climate Grassland Ecosystems. mSystems (2022)
Steffen Buessecker, Marike Palmer, Dengxun Lai, Joshua Dimapilis, Xavier Mayali, Damon Mosier, Jian-Yu Jiao, Daniel R Colman, Lisa M Keller, Emily St John, Michelle Miranda, Cristina Gonzalez, Lizett Gonzalez, Christian Sam, Christopher Villa, Madeline Zhuo, Nicholas Bodman, Fernando Robles, Eric S Boyd, Alysia D Cox, Brian St Clair, Zheng-Shuang Hua, Wen-Jun Li, Anna-Louise Reysenbach, Matthew B Stott, Peter K Weber, Jennifer Pett-Ridge, Anne E Dekas, Brian P Hedlund, Jeremy A Dodsworth
An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea. Nature communications 13 (1) (2022)
Noah W Sokol, Eric W Slessarev, Gianna L Marschmann, Alexa M Nicolas, Steven J Blazewicz, Eoin L Brodie, Mary K Firestone, Megan M Foley, Rachel Hestrin, Bruce A Hungate, Benjamin J Koch, Bram W G Stone, Matthew B Sullivan, Olivier Zablocki, null null, Jennifer Pett-Ridge
Life and death in the soil microbiome: how ecological processes influence biogeochemistry. Nature reviews. Microbiology 20 (7) (2022)
Bram W G Stone, Junhui Li, Benjamin J Koch, Steven J Blazewicz, Paul Dijkstra, Michaela Hayer, Kirsten S Hofmockel, Xiao-Jun Allen Liu, Rebecca L Mau, Ember M Morrissey, Jennifer Pett-Ridge, Egbert Schwartz, Bruce A Hungate
Nutrients cause consolidation of soil carbon flux to small proportion of bacterial community. Nature communications 12 (1) (2021)
César Terrer, Richard P Phillips, Bruce A Hungate, J Rosende, Jennifer Pett-Ridge, M E Craig, Kees Jan van Groenigen, Trevor F Keenan, Benjamin N Sulman, B D Stocker, Peter B Reich, Adam F A Pellegrini, Elise Pendall, H Zhang, R D Evans, Yolima Carrillo, J B Fisher, K Van Sundert, Sara Vicca, Robert B Jackson
A trade-off between plant and soil carbon storage under elevated CO2. Nature 591 (7851) (2021)
Benjamin Bolduc, Olivier Zablocki, Jiarong Guo, Ahmed A Zayed, Dean Vik, Paramvir Dehal, Elisha M Wood-Charlson, Adam Arkin, Nirav Merchant, Jennifer Pett-Ridge, Simon Roux, Matthew W Vaughn, Matthew B Sullivan
iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. ISME communications 1 (1) (2021)
Rachel A Neurath, Jennifer Pett-Ridge, Ilexis Chu-Jacoby, Donald Herman, Thea L Whitman, Peter S Nico, Andrew S Lipton, Jennifer Kyle, Malak M Tfaily, Allison M Thompson, Mary K Firestone
Root Carbon Interaction with Soil Minerals Is Dynamic, Leaving a Legacy of Microbially Derived Residues. Environmental science & technology 55 (19) (2021)
Erin E Nuccio, Nhu H Nguyen, Ulisses Nunes da Rocha, Xavier Mayali, Jeremy Bougoure, Peter K Weber, Eoin L Brodie, Mary Firestone, Jennifer Pett-Ridge
Community RNA-Seq: multi-kingdom responses to living versus decaying roots in soil. ISME communications 1 (1) (2021)
Benjamin Bolduc, Olivier Zablocki, Jiarong Guo, Ahmed A Zayed, Dean Vik, Paramvir Dehal, Elisha M Wood-Charlson, Adam Arkin, Nirav Merchant, Jennifer Pett-Ridge, Simon Roux, Matthew W Vaughn, Matthew B Sullivan
iVirus 2.0: Cyberinfrastructure-supported tools and data to power DNA virus ecology. ISME communications 1 (1) (2021)
Colin T Bates, Arthur Escalas, Jialiang Kuang, Lauren Hale, Yuan Wang, Don Herman, Erin E Nuccio, Xiaoling Wan, Amrita Bhattacharyya, Ying Fu, Ren-Mao Tian, Gangsheng Wang, Daliang Ning, Yunfeng Yang, Liyou Wu, Jennifer Pett-Ridge, Malay Saha, Kelly Craven, Eoin L Brodie, Mary Firestone, Jizhong Zhou
Conversion of marginal land into switchgrass conditionally accrues soil carbon but reduces methane consumption. The ISME journal (2021)
Chao Wang, Ember M Morrissey, Rebecca L Mau, Michaela Hayer, Juan Piñeiro, Michelle C Mack, Jane C Marks, Sheryl L Bell, Samantha N Miller, Egbert Schwartz, Paul Dijkstra, Benjamin J Koch, Bram W Stone, Alicia M Purcell, Steven J Blazewicz, Kirsten S Hofmockel, Jennifer Pett-Ridge, Bruce A Hungate
The temperature sensitivity of soil: microbial biodiversity, growth, and carbon mineralization. The ISME journal 15 (9) (2021)
Evan P Starr, Shengjing Shi, Steven J Blazewicz, Benjamin J Koch, Alexander J Probst, Bruce A Hungate, Jennifer Pett-Ridge, Mary K Firestone, Jillian F Banfield
Stable-Isotope-Informed, Genome-Resolved Metagenomics Uncovers Potential Cross-Kingdom Interactions in Rhizosphere Soil. mSphere 6 (5) (2021)
Alicia M Purcell, Michaela Hayer, Benjamin J Koch, Rebecca L Mau, Steven J Blazewicz, Paul Dijkstra, Michelle C Mack, Jane C Marks, Ember M Morrissey, Jennifer Pett-Ridge, Rachel L Rubin, Egbert Schwartz, Natasja C van Gestel, Bruce A Hungate
Decreased growth of wild soil microbes after 15 years of transplant-induced warming in a montane meadow. Global change biology 28 (1) (2021)
Bruce A Hungate, Jane C Marks, Mary E Power, Egbert Schwartz, Kees Jan van Groenigen, Steven J Blazewicz, Peter F Chuckran, Paul Dijkstra, Brianna K Finley, Mary K Firestone, Megan Foley, Alex Greenlon, Michaela Hayer, Kirsten S Hofmockel, Benjamin J Koch, Michelle C Mack, Rebecca L Mau, Samantha N Miller, Ember M Morrissey, Jeffrey R Propster, Alicia M Purcell, Ella T Sieradzki, Evan P Starr, Bram W G Stone, César Terrer, Jennifer Pett-Ridge
The Functional Significance of Bacterial Predators. mBio 12 (2) (2021)
Erin E Nuccio, Nhu H Nguyen, Ulisses Nunes da Rocha, Xavier Mayali, Jeremy Bougoure, Peter K Weber, Eoin L Brodie, Mary Firestone, Jennifer Pett-Ridge
Community RNA-Seq: multi-kingdom responses to living versus decaying roots in soil. ISME communications 1 (1) (2021)
Bram W G Stone, Junhui Li, Benjamin J Koch, Steven J Blazewicz, Paul Dijkstra, Michaela Hayer, Kirsten S Hofmockel, Xiao-Jun Allen Liu, Rebecca L Mau, Ember M Morrissey, Jennifer Pett-Ridge, Egbert Schwartz, Bruce A Hungate
Author Correction: Nutrients cause consolidation of soil carbon flux to small proportion of bacterial community. Nature communications 12 (1) (2021)
Mengting Maggie Yuan, Anne Kakouridis, Evan Starr, Nhu Nguyen, Shengjing Shi, Jennifer Pett-Ridge, Erin Nuccio, Jizhong Zhou, Mary K Firestone
Fungal-Bacterial Cooccurrence Patterns Differ between Arbuscular Mycorrhizal Fungi and Nonmycorrhizal Fungi across Soil Niches. mBio 12 (2) (2021)
Rachel Hestrin, Peter K Weber, Jennifer Pett-Ridge, Johannes Lehmann
Plants and mycorrhizal symbionts acquire substantial soil nitrogen from gaseous ammonia transport. The New phytologist 231 (5) (2021)
Steven J Blazewicz, Bruce A Hungate, Benjamin J Koch, Erin E Nuccio, Ember M Morrissey, Eoin L Brodie, Egbert Schwartz, Jennifer Pett-Ridge, Mary K Firestone
Taxon-specific microbial growth and mortality patterns reveal distinct temporal population responses to rewetting in a California grassland soil. The ISME journal 14 (6) (2020)
Erin E Nuccio, Evan Starr, Ulas Karaoz, Eoin L Brodie, Jizhong Zhou, Susannah G Tringe, Rex R Malmstrom, Tanja Woyke, Jillian F Banfield, Mary K Firestone, Jennifer Pett-Ridge
Niche differentiation is spatially and temporally regulated in the rhizosphere. The ISME journal 14 (4) (2020)
Ella T Sieradzki, Benjamin J Koch, Alex Greenlon, Rohan Sachdeva, Rex R Malmstrom, Rebecca L Mau, Steven J Blazewicz, Mary K Firestone, Kirsten S Hofmockel, Egbert Schwartz, Bruce A Hungate, Jennifer Pett-Ridge
Measurement Error and Resolution in Quantitative Stable Isotope Probing: Implications for Experimental Design. mSystems 5 (4) (2020)
Ember M Morrissey, Rebecca L Mau, Michaela Hayer, Xiao-Jun Allen Liu, Egbert Schwartz, Paul Dijkstra, Benjamin J Koch, Kara Allen, Steven J Blazewicz, Kirsten S Hofmockel, Jennifer Pett-Ridge, Bruce A Hungate
Evolutionary history constrains microbial traits across environmental variation. Nature ecology & evolution 3 (7) (2019)
Volkan Sevim, Juna Lee, Robert Egan, Alicia Clum, Hope Hundley, Janey Lee, R Craig Everroad, Angela M Detweiler, Brad M Bebout, Jennifer Pett-Ridge, Markus Göker, Alison E Murray, Stephen R Lindemann, Hans-Peter Klenk, Ronan O'Malley, Matthew Zane, Jan-Fang Cheng, Alex Copeland, Christopher Daum, Esther Singer, Tanja Woyke
Shotgun metagenome data of a defined mock community using Oxford Nanopore, PacBio and Illumina technologies. Scientific data 6 (1) (2019)
Cheri M Ackerman, Peter K Weber, Tong Xiao, Bao Thai, Tiffani J Kuo, Emily Zhang, Jennifer Pett-Ridge, Christopher J Chang
Multimodal LA-ICP-MS and nanoSIMS imaging enables copper mapping within photoreceptor megamitochondria in a zebrafish model of Menkes disease. Metallomics : integrated biometal science 10 (3) (2018)
Amrita Bhattacharyya, Ashley N Campbell, Malak M Tfaily, Yang Lin, Ravi K Kukkadapu, Whendee L Silver, Peter S Nico, Jennifer Pett-Ridge
Redox Fluctuations Control the Coupled Cycling of Iron and Carbon in Tropical Forest Soils. Environmental science & technology 52 (24) (2018)