Xiao-Gen Zhou (Xiaogen Zhou)

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 21

Top Topics

Single Molecule

Electron Microscopy

Top Venues

Communications biology

Nature communications

Briefings in bioinformatics

This page only lists publications with an associated author ORCID identifier.

Publications

Jing Zhang, Shuo Zhang, Wei Zhou, Xiang Zhang, Guanjin Li, Ruoxuan Li, Xingyu Lin, Ziying Chen, Fang Liu, Pan Shen, Xiao-Gen Zhou, Yue Gao, Zhenguo Chen, Yanjie Chao, Chengyuan Wang
A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program. Nature communications 15 (1) (2024)
Ziying Zhang, Yaxian Cai, Biao Zhang, Wei Zheng, Peter L Freddolino, Gui-Jun Zhang, Xiao-Gen Zhou
DEMO-EM2: assembling protein complex structures from cryo-EM maps through intertwined chain and domain fitting. Briefings in bioinformatics 25 (2) (2024)
Jing Zhang, Shuo Zhang, Wei Zhou, Xiang Zhang, Guanjin Li, Ruoxuan Li, Xingyu Lin, Ziying Chen, Fang Liu, Pan Shen, Xiao-Gen Zhou, Yue Gao, Zhenguo Chen, Yanjie Chao, Chengyuan Wang
A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program. Nature communications 15 (1) (2024)
Jing Zhang, Shuo Zhang, Wei Zhou, Xiang Zhang, Guanjin Li, Ruoxuan Li, Xingyu Lin, Ziying Chen, Fang Liu, Pan Shen, Xiao-Gen Zhou, Yue Gao, Zhenguo Chen, Yanjie Chao, Chengyuan Wang
A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program. Nature communications 15 (1) (2024)
Jing Zhang, Shuo Zhang, Wei Zhou, Xiang Zhang, Guanjin Li, Ruoxuan Li, Xingyu Lin, Ziying Chen, Fang Liu, Pan Shen, Xiao-Gen Zhou, Yue Gao, Zhenguo Chen, Yanjie Chao, Chengyuan Wang
A widely conserved protein Rof inhibits transcription termination factor Rho and promotes Salmonella virulence program. Nature communications 15 (1) (2024)
Ziying Zhang, Yaxian Cai, Biao Zhang, Wei Zheng, Peter L Freddolino, Gui-Jun Zhang, Xiao-Gen Zhou
DEMO-EM2: assembling protein complex structures from cryo-EM maps through intertwined chain and domain fitting. Briefings in bioinformatics 25 (2) (2024)
Kailong Zhao, Yuhao Xia, Fujin Zhang, Xiao-Gen Zhou, Stan Ziqing Li, Gui-Jun Zhang
Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader. Communications biology 6 (1) (2023)
Kailong Zhao, Yuhao Xia, Fujin Zhang, Xiao-Gen Zhou, Stan Ziqing Li, Gui-Jun Zhang
Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader. Communications biology 6 (1) (2023)
Kailong Zhao, Yuhao Xia, Fujin Zhang, Xiao-Gen Zhou, Stan Ziqing Li, Gui-Jun Zhang
Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader. Communications biology 6 (1) (2023)
Yuhao Xia, Kailong Zhao, Dong Liu, Xiao-Gen Zhou, Gui-Jun Zhang
Multi-domain and complex protein structure prediction using inter-domain interactions from deep learning. Communications biology 6 (1) (2023)
Kailong Zhao, Yuhao Xia, Fujin Zhang, Xiao-Gen Zhou, Stan Ziqing Li, Gui-Jun Zhang
Protein structure and folding pathway prediction based on remote homologs recognition using PAthreader. Communications biology 6 (1) (2023)
Xiao-Gen Zhou, Yang Li, Chengxin Zhang, Wei Zheng, Guijun Zhang, Yang Zhang
Progressive assembly of multi-domain protein structures from cryo-EM density maps. Nature computational science 2 (4) (2022)
Chun-Xiang Peng, Xiao-Gen Zhou, Yu-Hao Xia, Jun Liu, Ming-Hua Hou, Gui-Jun Zhang
Structural analogue-based protein structure domain assembly assisted by deep learning. Bioinformatics (Oxford, England) 38 (19) (2022)
Xiao-Gen Zhou, Chunxiang Peng, Wei Zheng, Yang Li, Gui-Jun Zhang, Yang Zhang
DEMO2: Assemble multi-domain protein structures by coupling analogous template alignments with deep-learning inter-domain restraint prediction. Nucleic acids research (2022)
Xiao-Gen Zhou, Wei Zheng, Yang Li, Robin Pearce, Chengxin Zhang, Eric W Bell, Guijun Zhang, Yang Zhang
I-TASSER-MTD: a deep-learning-based platform for multi-domain protein structure and function prediction. Nature protocols 17 (10) (2022)
Wei Zheng, Yang Li, Chengxin Zhang, Xiao-Gen Zhou, Robin Pearce, Eric W Bell, Xiaoqiang Huang, Yang Zhang
Protein structure prediction using deep learning distance and hydrogen-bonding restraints in CASP14. Proteins 89 (12) (2021)
Yang Li, Chengxin Zhang, Eric W Bell, Wei Zheng, Xiao-Gen Zhou, Dong-Jun Yu, Yang Zhang
Deducing high-accuracy protein contact-maps from a triplet of coevolutionary matrices through deep residual convolutional networks. PLoS computational biology 17 (3) (2021)
Yang Li, Chengxin Zhang, Wei Zheng, Xiao-Gen Zhou, Eric W Bell, Dong-Jun Yu, Yang Zhang
Protein inter-residue contact and distance prediction by coupling complementary coevolution features with deep residual networks in CASP14. Proteins 89 (12) (2021)
Xiao-Gen Zhou, Yang Li, Chengxin Zhang, Wei Zheng, Guijun Zhang, Yang Zhang
Progressive and accurate assembly of multi-domain protein structures from cryo-EM density maps. bioRxiv : the preprint server for biology (2020)
Chengxin Zhang, Wei Zheng, Xiaoqiang Huang, Eric W Bell, Xiao-Gen Zhou, Yang Zhang
Protein Structure and Sequence Reanalysis of 2019-nCoV Genome Refutes Snakes as Its Intermediate Host and the Unique Similarity between Its Spike Protein Insertions and HIV-1. Journal of proteome research 19 (4) (2020)
Xiao-Gen Zhou, Jun Hu, Chengxin Zhang, Guijun Zhang, Yang Zhang
Assembling multidomain protein structures through analogous global structural alignments. Proceedings of the National Academy of Sciences of the United States of America 116 (32) (2019)