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Xiaoxu Yang

Scopus Author ID ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2017-2023
Publications (10 Years): 27

Top Venues

University of California San Diego

Peking University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of California San Diego Aug 6o 2018

United States

Postdoctoral Scholar :: Neurosciences

Education History

Peking University - Jul 12o 2018

China

PHD :: Center for Bioinformatics, School of Life Sciences

Publications

Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
McKinzie A Garrison, Yeongjun Jang, Taejeong Bae, Adriana Cherskov, Sarah B Emery, Liana Fasching, Attila Jones, John B Moldovan, Cindy Molitor, Sirisha Pochareddy, Mette A Peters, Joo Heon Shin, Yifan Wang, Xiaoxu Yang, Schahram Akbarian, Andrew Chess, Fred H Gage, Joseph G Gleeson, Jeffrey M Kidd, Michael J McConnell, Ryan E Mills, John V Moran, Peter J Park, Nenad Sestan, Alexander Eckehart Urban, Flora M Vaccarino, Christopher A Walsh, Daniel R Weinberger, Sarah J Wheelan, Alexej Abyzov, null null
Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases. Scientific data 10 (1) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics (2023)
Xiaoxu Yang, Xin Xu, Martin W Breuss, Danny Antaki, Laurel L Ball, Changuk Chung, Jiawei Shen, Chen Li, Renee D George, Yifan Wang, Taejeong Bae, Yuhe Cheng, Alexej Abyzov, Liping Wei, Ludmil B Alexandrov, Jonathan L Sebat, null null, Joseph G Gleeson
Control-independent mosaic single nucleotide variant detection with DeepMosaic. Nature biotechnology (2023)
Changuk Chung, Xiaoxu Yang, Robert F Hevner, Katie Kennedy, Keng Ioi Vong, Yang Liu, Arzoo Patel, Rahul Nedunuri, Scott T Barton, Chelsea Barrows, Valentina Stanley, Swapnil Mittal, Martin W Breuss, Johannes C M Schlachetzki, Joseph G Gleeson
Cell-type-resolved somatic mosaicism reveals clonal dynamics of the human forebrain. bioRxiv : the preprint server for biology (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Joseph G Gleeson
Post-zygotic brain mosaicism as a result of partial reversion of pre-zygotic aneuploidy. Nature genetics (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Changuk Chung, Xiaoxu Yang, Taejeong Bae, Keng Ioi Vong, Swapnil Mittal, Catharina Donkels, H Westley Phillips, Zhen Li, Ashley P L Marsh, Martin W Breuss, Laurel L Ball, Camila Araújo Bernardino Garcia, Renee D George, Jing Gu, Mingchu Xu, Chelsea Barrows, Kiely N James, Valentina Stanley, Anna S Nidhiry, Sami Khoury, Gabrielle Howe, Emily Riley, Xin Xu, Brett Copeland, Yifan Wang, Se-Hoon Kim, Hoon-Chul Kang, Andreas Schulze-Bonhage, Carola A Haas, Horst Urbach, Marco Prinz, David D Limbrick, Christina A Gurnett, Matthew D Smyth, Shifteh Sattar, Mark Nespeca, David D Gonda, Katsumi Imai, Yukitoshi Takahashi, Hsin-Hung Chen, Jin-Wu Tsai, Valerio Conti, Renzo Guerrini, Orrin Devinsky, Wilson Araújo da Silva Junior, Helio R Machado, Gary W Mathern, Alexej Abyzov, Sara Baldassari, Stéphanie Baulac, null null, null null, Joseph G Gleeson
Comprehensive multi-omic profiling of somatic mutations in malformations of cortical development. Nature genetics 55 (2) (2023)
Jared H Graham, Johannes C M Schlachetzki, Xiaoxu Yang, Martin W Breuss
Genomic Mosaicism of the Brain: Origin, Impact, and Utility. Neuroscience bulletin (2023)
Martin W Breuss, Xiaoxu Yang, Valentina Stanley, Jennifer McEvoy-Venneri, Xin Xu, Arlene J Morales, Joseph G Gleeson
Unbiased mosaic variant assessment in sperm: a cohort study to test predictability of transmission. eLife 11 (2022)
Martin W Breuss, Xiaoxu Yang, Johannes C M Schlachetzki, Danny Antaki, Addison J Lana, Xin Xu, Changuk Chung, Guoliang Chai, Valentina Stanley, Qiong Song, Traci F Newmeyer, An Nguyen, Sydney O'Brien, Marten A Hoeksema, Beibei Cao, Alexi Nott, Jennifer McEvoy-Venneri, Martina P Pasillas, Scott T Barton, Brett R Copeland, Shareef Nahas, Lucitia Van Der Kraan, Yan Ding, null null, Christopher K Glass, Joseph G Gleeson
Somatic mosaicism reveals clonal distributions of neocortical development. Nature 604 (7907) (2022)
Camila A B Garcia, Simone C S Carvalho, Xiaoxu Yang, Laurel L Ball, Renee D George, Kiely N James, Valentina Stanley, Martin W Breuss, Ursula Thomé, Marcelo Volpon Santos, Fabiano P Saggioro, Luciano Neder Serafini, Wilson Araújo da Silva Junior, Joseph G Gleeson, Hélio Rubens Machado
mTOR pathway somatic variants and the molecular pathogenesis of hemimegalencephaly. Epilepsia open 5 (1) (2020)
Martin W Breuss, Danny Antaki, Renee D George, Morgan Kleiber, Kiely N James, Laurel L Ball, Oanh Hong, Ileena Mitra, Xiaoxu Yang, Sara A Wirth, Jing Gu, Camila A B Garcia, Madhusudan Gujral, William M Brandler, Damir Musaev, An Nguyen, Jennifer McEvoy-Venneri, Renatta Knox, Evan Sticca, Martha Cristina Cancino Botello, Javiera Uribe Fenner, Maria Cárcel Pérez, Maria Arranz, Andrea B Moffitt, Zihua Wang, Amaia Hervás, Orrin Devinsky, Melissa Gymrek, Jonathan Sebat, Joseph G Gleeson
Autism risk in offspring can be assessed through quantification of male sperm mosaicism. Nature medicine 26 (1) (2019)
Boxun Zhao, Qixi Wu, Adam Yongxin Ye, Jing Guo, Xianing Zheng, Xiaoxu Yang, Linlin Yan, Qing-Rong Liu, Thomas M Hyde, Liping Wei, August Yue Huang
Somatic LINE-1 retrotransposition in cortical neurons and non-brain tissues of Rett patients and healthy individuals. PLoS genetics 15 (4) (2019)
Shereen Georges Ghosh, Lu Wang, Martin W Breuss, Joshua D Green, Valentina Stanley, Xiaoxu Yang, Danica Ross, Bryan J Traynor, Amal M Alhashem, Matloob Azam, Laila Selim, Laila Bastaki, Hanan I Elbastawisy, Samia Temtamy, Maha Zaki, Joseph G Gleeson
Recurrent homozygous damaging mutation in TMX2, encoding a protein disulfide isomerase, in four families with microlissencephaly. Journal of medical genetics 57 (4) (2019)
Xiaoling Yang, Xiaoxu Yang, Jiaoyang Chen, Shupin Li, Qi Zeng, August Yue Huang, Adam Yongxin Ye, Zhe Yu, Sheng Wang, Yuwu Jiang, Xiru Wu, Qixi Wu, Liping Wei, Yuehua Zhang
ATP1A3 mosaicism in families with alternating hemiplegia of childhood. Clinical genetics 96 (1) (2019)
August Yue Huang, Xiaoxu Yang, Sheng Wang, Xianing Zheng, Qixi Wu, Adam Yongxin Ye, Liping Wei
Distinctive types of postzygotic single-nucleotide mosaicisms in healthy individuals revealed by genome-wide profiling of multiple organs. PLoS genetics 14 (5) (2018)
Kaile Wang, Shujuan Lai, Xiaoxu Yang, Tianqi Zhu, Xuemei Lu, Chung-I Wu, Jue Ruan
Ultrasensitive and high-efficiency screen of de novo low-frequency mutations by o2n-seq. Nature communications 8 (2017)
Yanmei Dou, Xiaoxu Yang, Ziyi Li, Sheng Wang, Zheng Zhang, Adam Yongxin Ye, Linlin Yan, Changhong Yang, Qixi Wu, Jiarui Li, Boxun Zhao, August Yue Huang, Liping Wei
Postzygotic single-nucleotide mosaicisms contribute to the etiology of autism spectrum disorder and autistic traits and the origin of mutations. Human mutation 38 (8) (2017)
Xiaoxu Yang, Aijie Liu, Xiaojing Xu, Xiaoling Yang, Qi Zeng, Adam Yongxin Ye, Zhe Yu, Sheng Wang, August Yue Huang, Xiru Wu, Qixi Wu, Liping Wei, Yuehua Zhang
Genomic mosaicism in paternal sperm and multiple parental tissues in a Dravet syndrome cohort. Scientific reports 7 (1) (2017)

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Publication Activity (10 Years)

Top Topics

Top Venues

Xiaoxu Yang