Xing-Tan Zhang (Xingtan Zhang)

ORCID

Publication Activity (10 Years)

Years Active: 2020-2024
Publications (10 Years): 30

Top Venues

Horticulture research

Nature communications

Nature plants

Plant biotechnology journal

Fujian Agriculture and Forestry University

Chongqing University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Fujian Agriculture and Forestry University Jul 10 2015

China

Associate Professor

Education History

Chongqing University Sep 01 2009 - Jun 30 2015

China

PHD

Publications

Xiaofei Zeng, Zili Yi, Xing-Tan Zhang, Yuhui Du, Yu Li, Zhiqing Zhou, Sijie Chen, Huijie Zhao, Sai Yang, Yibin Wang, Guoan Chen
Chromosome-level scaffolding of haplotype-resolved assemblies using Hi-C data without reference genomes. Nature plants 10 (8) (2024)
Yixue Bao, Qing Zhang, Jiangfeng Huang, Shengcheng Zhang, Wei Yao, Zehuai Yu, Zuhu Deng, Jiaxin Yu, Weilong Kong, Xikai Yu, Shan Lu, Yibin Wang, Ru Li, Yuhan Song, Chengwu Zou, Yuzhi Xu, Zongling Liu, Fan Yu, Jiaming Song, Youzong Huang, Ji-Sen Zhang, Haifeng Wang, Baoshan Chen, Xing-Tan Zhang, Mu-Qing Zhang
A chromosomal-scale genome assembly of modern cultivated hybrid sugarcane provides insights into origination and evolution. Nature communications 15 (1) (2024)
Zhaojia Chen, Noor Ul Ain, Qian Zhao, Xing-Tan Zhang
From tradition to innovation: conventional and deep learning frameworks in genome annotation. Briefings in bioinformatics 25 (3) (2024)
Xiuting Hua, Huihong Shi, Gui Zhuang, Yuhong Lan, Shaoli Zhou, Dongxu Zhao, Ming-Ju Amy Lyu, Sehrish Akbar, Jia Liu, Yuan Yuan, Zhen Li, Qing Jiang, Kaixin Huang, Yating Zhang, Qing Zhang, Gang Wang, Yu Wang, Xiaomin Yu, Pinghua Li, Xing-Tan Zhang, Jianping Wang, Shenghua Xiao, Wei Yao, Ray Ming, Xin-Guang Zhu, Mu-Qing Zhang, Haibao Tang, Ji-Sen Zhang
Regulatory Network of the Late-Recruited Primary Decarboxylase C4NADP-ME in Sugarcane. Plant physiology (2024)
Fang Wang, Yibin Wang, Xiaofei Zeng, Shengcheng Zhang, Jiaxin Yu, Dongxi Li, Xing-Tan Zhang
MIKE: an ultrafast, assembly-, and alignment-free approach for phylogenetic tree construction. Bioinformatics (Oxford, England) 40 (4) (2024)
Xiaofei Zeng, Zili Yi, Xing-Tan Zhang, Yuhui Du, Yu Li, Zhiqing Zhou, Sijie Chen, Huijie Zhao, Sai Yang, Yibin Wang, Guoan Chen
Chromosome-level scaffolding of haplotype-resolved assemblies using Hi-C data without reference genomes. Nature plants 10 (8) (2024)
Yixue Bao, Qing Zhang, Jiangfeng Huang, Shengcheng Zhang, Wei Yao, Zehuai Yu, Zuhu Deng, Jiaxin Yu, Weilong Kong, Xikai Yu, Shan Lu, Yibin Wang, Ru Li, Yuhan Song, Chengwu Zou, Yuzhi Xu, Zongling Liu, Fan Yu, Jiaming Song, Youzong Huang, Ji-Sen Zhang, Haifeng Wang, Baoshan Chen, Xing-Tan Zhang, Mu-Qing Zhang
A chromosomal-scale genome assembly of modern cultivated hybrid sugarcane provides insights into origination and evolution. Nature communications 15 (1) (2024)
Wenying Li, Xiang Dong, Xing-Tan Zhang, Jie Cao, Meilan Liu, Xu Zhou, Hongxu Long, Heping Cao, Hai Lin, Lin Zhang
Genome assembly and resequencing shed light on evolution, population selection, and sex identification in Vernicia montana . Horticulture research 11 (7) (2024)
Xiaofei Zeng, Zili Yi, Xing-Tan Zhang, Yuhui Du, Yu Li, Zhiqing Zhou, Sijie Chen, Huijie Zhao, Sai Yang, Yibin Wang, Guoan Chen
Chromosome-level scaffolding of haplotype-resolved assemblies using Hi-C data without reference genomes. Nature plants (2024)
Yixue Bao, Qing Zhang, Jiangfeng Huang, Shengcheng Zhang, Wei Yao, Zehuai Yu, Zuhu Deng, Jiaxin Yu, Weilong Kong, Xikai Yu, Shan Lu, Yibin Wang, Ru Li, Yuhan Song, Chengwu Zou, Yuzhi Xu, Zongling Liu, Fan Yu, Jiaming Song, Youzong Huang, Ji-Sen Zhang, Haifeng Wang, Baoshan Chen, Xing-Tan Zhang, Mu-Qing Zhang
A chromosomal-scale genome assembly of modern cultivated hybrid sugarcane provides insights into origination and evolution. Nature communications 15 (1) (2024)
Wenying Li, Xiang Dong, Xing-Tan Zhang, Jie Cao, Meilan Liu, Xu Zhou, Hongxu Long, Heping Cao, Hai Lin, Lin Zhang
Genome assembly and resequencing shed light on evolution, population selection, and sex identification in Vernicia montana . Horticulture research 11 (7) (2024)
Weilong Kong, Qiufang Zhu, Qing Zhang, Yiwang Zhu, Jingjing Yang, Kun Chai, Wenlong Lei, Mengwei Jiang, Shengcheng Zhang, Jinke Lin, Xing-Tan Zhang
5mC DNA methylation modification-mediated regulation in tissue functional differentiation and important flavor substance synthesis of tea plant ( Camellia sinensis L.). Horticulture research 10 (8) (2023)
Shuai Chen, Pengjie Wang, Weilong Kong, Kun Chai, Shengcheng Zhang, Jiaxin Yu, Yibin Wang, Mengwei Jiang, Wenlong Lei, Xiao Chen, Wenling Wang, Yingying Gao, Shenyang Qu, Fang Wang, Yinghao Wang, Qing Zhang, Mengya Gu, Kaixing Fang, Chunlei Ma, Weijiang Sun, Naixing Ye, Hualing Wu, Xing-Tan Zhang
Gene mining and genomics-assisted breeding empowered by the pangenome of tea plant Camellia sinensis. Nature plants (2023)
Weilong Kong, Jiaxin Yu, Jingjing Yang, Yanbing Zhang, Xing-Tan Zhang
The high-resolution three-dimensional (3D) chromatin map of the tea plant ( Camellia sinensis ). Horticulture research 10 (10) (2023)
Zhenyang Liao, Tianwen Zhang, Wenlong Lei, Yibin Wang, Jiaxin Yu, Yinghao Wang, Kun Chai, Gang Wang, Huahao Zhang, Xing-Tan Zhang
A telomere-to-telomere reference genome of ficus ( Ficus hispida ) provides new insights into sex determination. Horticulture research 11 (1) (2023)
Ping Zhou, Siru Lei, Xiaodan Zhang, Yinghao Wang, Rui Guo, Shaobin Yan, Guang Jin, Xing-Tan Zhang
Genome sequencing revealed the red-flower trait candidate gene of a peach landrace. Horticulture research 10 (11) (2023)
Zhenyang Liao, Tianwen Zhang, Wenlong Lei, Yibin Wang, Jiaxin Yu, Yinghao Wang, Kun Chai, Gang Wang, Huahao Zhang, Xing-Tan Zhang
A telomere-to-telomere reference genome of ficus ( Ficus hispida ) provides new insights into sex determination. Horticulture research 11 (1) (2023)
Aiping Song, Jiangshuo Su, Haibin Wang, Zhongren Zhang, Xing-Tan Zhang, Yves Van de Peer, Fei Chen, Weimin Fang, Zhiyong Guan, Fei Zhang, Zhenxing Wang, Likai Wang, Baoqing Ding, Shuang Zhao, Lian Ding, Ye Liu, Lijie Zhou, Jun He, Diwen Jia, Jiali Zhang, Chuwen Chen, Zhongyu Yu, Daojin Sun, Jiafu Jiang, Sumei Chen, Fadi Chen
Analyses of a chromosome-scale genome assembly reveal the origin and evolution of cultivated chrysanthemum. Nature communications 14 (1) (2023)
Yinquan Qu, Xulan Shang, Shengzuo Fang, Xing-Tan Zhang, Xiang-Xiang Fu
Genome assembly of two diploid and one auto-tetraploid Cyclocarya paliurus genomes. Scientific data 10 (1) (2023)
Yulong Wang, Conghui Jiang, Xing-Tan Zhang, Huimin Yan, Zhigang Yin, Xingming Sun, Fenghua Gao, Yan Zhao, Wei Liu, Shichen Han, Jingjing Zhang, Yage Zhang, Zhanying Zhang, Hongliang Zhang, Jinjie Li, Xianzhi Xie, Quanzhi Zhao, Xiaoning Wang, Guoyou Ye, Junzhou Li, Ray Ming, Zi-Chao Li
Upland rice genomic signatures of adaptation to drought resistance and navigation to molecular design breeding. Plant biotechnology journal (2023)
Kun Chai, Shuai Chen, Pengjie Wang, Weilong Kong, Xiaokai Ma, Xing-Tan Zhang
Multiomics Analysis Reveals the Genetic Basis of Volatile Terpenoid Formation in Oolong Tea. Journal of agricultural and food chemistry (2023)
Lingfei Li, Xiaoli Chen, Dongming Fang, Shanshan Dong, Xing Guo, Na Li, Lucia Campos-Dominguez, Wenguang Wang, Yang Liu, Xiaoan Lang, Yang Peng, Daike Tian, Daniel C Thomas, Weixue Mu, Min Liu, Chenyu Wu, Ting Yang, Suzhou Zhang, Leilei Yang, Jianfen Yang, Zhong-Jian Liu, Liangsheng Zhang, Xing-Tan Zhang, Fei Chen, Yuan-Nian Jiao, Yalong Guo, Mark Hughes, Wei Wang, Xiaofei Liu, Chunmei Zhong, Ai-Rong Li, Sunil Kumar Sahu, Huanming Yang, Ernest Wu, Joel Sharbrough, Michael Lisby, Xin Liu, Xun Xu, Douglas Edward Soltis, Yves Van de Peer, Catherine A Kidner, Shou-Zhou Zhang, Huan Liu
Genomes shed light on the evolution of Begonia, a mega-diverse genus. The New phytologist 234 (1) (2022)
Dongna Ma, Jingping Fang, Qiansu Ding, Liufeng Wei, Yiying Li, Liwen Zhang, Xing-Tan Zhang
A survey of transcriptome complexity using full-length isoform sequencing in the tea plant Camellia sinensis. Molecular genetics and genomics : MGG 297 (5) (2022)
Jishan Lin, Wenping Zhang, Xing-Tan Zhang, Xiaokai Ma, Shengcheng Zhang, Shuai Chen, Yibin Wang, Haifeng Jia, Zhenyang Liao, Jing Lin, Mengting Zhu, Xiuming Xu, Mingxing Cai, Hui Zeng, Jifeng Wan, Weihai Yang, Tracie Matsumoto, Craig M Hardner, Catherine J Nock, Ray Ming
Signatures of selection in recently domesticated macadamia. Nature communications 13 (1) (2022)
Won Cheol Yim, Mia L Swain, Dongna Ma, Hong An, Kevin Andrew Bird, David D Curdie, Samuel Wang, Hyun Don Ham, Agusto R Luzuriaga-Neira, Jay S Kirkwood, Manhoi Hur, Juan K Q Solomon, Jeffrey F Harper, Dylan K Kosma, David Alvarez-Ponce, John C Cushman, Patrick P Edger, Annaliese S Mason, Joseph Chris Pires, Haibao Tang, Xing-Tan Zhang
The final piece of the Triangle of U: Evolution of the tetraploid Brassica carinata genome. The Plant cell 34 (11) (2022)
Jingjing Yue, Robert VanBuren, Juan Liu, Jingping Fang, Xing-Tan Zhang, Zhenyang Liao, Ching Man Jennifer Wai, Xiuming Xu, Shuai Chen, Shengchen Zhang, Xiaokai Ma, Yaying Ma, Hongying Yu, Jing Lin, Ping Zhou, Yongji Huang, Ban Deng, Fang Deng, Xiaobing Zhao, Hansong Yan, Mahpara Fatima, Dessireé Zerpa-Catanho, Xiaodan Zhang, Zhicong Lin, Mei Yang, Nancy J Chen, Eric Mora-Newcomer, Patricia Quesada-Rojas, Antonio Bogantes, Víctor M Jiménez, Haibao Tang, Jisen Zhang, Ming-Li Wang, Robert E Paull, Qingyi Yu, Ray Ming
SunUp and Sunset genomes revealed impact of particle bombardment mediated transformation and domestication history in papaya. Nature genetics 54 (5) (2022)
Xing-Tan Zhang, Shuai Chen, Longqing Shi, Daping Gong, Shengcheng Zhang, Qian Zhao, Dongliang Zhan, Liette Vasseur, Yibin Wang, Jiaxin Yu, Zhenyang Liao, Xindan Xu, Rui Qi, Wenling Wang, Yunran Ma, Pengjie Wang, Naixing Ye, Dongna Ma, Yan Shi, Haifeng Wang, Xiaokai Ma, Xiangrui Kong, Jing Lin, Liufeng Wei, Yaying Ma, Ruoyu Li, Guiping Hu, Haifang He, Lin Zhang, Ray Ming, Gang Wang, Haibao Tang, Min-Sheng You
Haplotype-resolved genome assembly provides insights into evolutionary history of the tea plant Camellia sinensis. Nature genetics 53 (8) (2021)
Rong Wang, Yang Yang, Yi Jing, Simon T Segar, Yu Zhang, Gang Wang, Jin Chen, Qing-Feng Liu, Shan Chen, Yan Chen, Astrid Cruaud, Yuan-Yuan Ding, Derek W Dunn, Qiang Gao, Philip M Gilmartin, Kai Jiang, Finn Kjellberg, Hong-Qing Li, Yuan-Yuan Li, Jian-Quan Liu, Min Liu, Carlos A Machado, Ray Ming, Jean-Yves Rasplus, Xin Tong, Ping Wen, Huan-Ming Yang, Jing-Jun Yang, Ye Yin, Xing-Tan Zhang, Yuan-Ye Zhang, Hui Yu, Zhen Yue, Stephen G Compton, Xiao-Yong Chen
Molecular mechanisms of mutualistic and antagonistic interactions in a plant-pollinator association. Nature ecology & evolution 5 (7) (2021)
Xuequn Chen, Chaobo Tong, Xing-Tan Zhang, Aixia Song, Ming Hu, Wei Dong, Fei Chen, Youping Wang, Jinxing Tu, Shengyi Liu, Haibao Tang, Liangsheng Zhang
A high-quality Brassica napus genome reveals expansion of transposable elements, subgenome evolution and disease resistance. Plant biotechnology journal 19 (3) (2020)
Dongna Ma, Shanshan Dong, Shengcheng Zhang, Xiuqing Wei, Qingjun Xie, Qiansu Ding, Rui Xia, Xing-Tan Zhang
Chromosome-level reference genome assembly provides insights into aroma biosynthesis in passion fruit (Passiflora edulis). Molecular ecology resources 21 (3) (2020)

Xing-Tan Zhang.css-eqlu8i{font-size:small;padding-left:4px;} (Xingtan Zhang)

Publication Activity (10 Years)

Top Topics

Top Venues

Xing-Tan Zhang (Xingtan Zhang)