Yan Guo

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 34

Top Topics

Quality Control

Gene Expression

Top Venues

International journal of molecular sciences

BioMed research international

Nucleic acids research

This page only lists publications with an associated author ORCID identifier.

Publications

Fengyao Yan, Limin Jiang, Danqian Chen, Michele Ceccarelli, Yan Guo
Reinventing gene expression connectivity through regulatory and spatial structural empowerment via principal node aggregation graph neural network. Nucleic acids research (2024)
Fengyao Yan, Limin Jiang, Danqian Chen, Michele Ceccarelli, Yan Guo
Reinventing gene expression connectivity through regulatory and spatial structural empowerment via principal node aggregation graph neural network. Nucleic acids research 52 (13) (2024)
Fengyao Yan, Limin Jiang, Danqian Chen, Michele Ceccarelli, Yan Guo
Reinventing gene expression connectivity through regulatory and spatial structural empowerment via principal node aggregation graph neural network. Nucleic acids research 52 (13) (2024)
Kathryn J Brayer, Huining Kang, Adel K El-Naggar, Simon Andreasen, Preben Homøe, Katalin Kiss, Lauge Mikkelsen, Steffen Heegaard, Daniel Pelaez, Acadia Moeyersoms, David T Tse, Yan Guo, David Y Lee, Scott A Ness
Dominant Gene Expression Profiles Define Adenoid Cystic Carcinoma (ACC) from Different Tissues: Validation of a Gene Signature Classifier for Poor Survival in Salivary Gland ACC. Cancers 15 (5) (2023)
Troy Zhang, Hui Yu, Limin Jiang, Yongsheng Bai, Xiaoyi Liu, Yan Guo
Comprehensive Pan-Cancer Mutation Density Patterns in Enhancer RNA. International journal of molecular sciences 25 (1) (2023)
Troy Zhang, Hui Yu, Limin Jiang, Yongsheng Bai, Xiaoyi Liu, Yan Guo
Comprehensive Pan-Cancer Mutation Density Patterns in Enhancer RNA. International journal of molecular sciences 25 (1) (2023)
Troy Zhang, Hui Yu, Limin Jiang, Yongsheng Bai, Xiaoyi Liu, Yan Guo
Comprehensive Pan-Cancer Mutation Density Patterns in Enhancer RNA. International journal of molecular sciences 25 (1) (2023)
Troy Zhang, Hui Yu, Limin Jiang, Yongsheng Bai, Xiaoyi Liu, Yan Guo
Comprehensive Pan-Cancer Mutation Density Patterns in Enhancer RNA. International journal of molecular sciences 25 (1) (2023)
Kathryn J Brayer, Huining Kang, Adel K El-Naggar, Simon Andreasen, Preben Homøe, Katalin Kiss, Lauge Mikkelsen, Steffen Heegaard, Daniel Pelaez, Acadia Moeyersoms, David T Tse, Yan Guo, David Y Lee, Scott A Ness
Dominant Gene Expression Profiles Define Adenoid Cystic Carcinoma (ACC) from Different Tissues: Validation of a Gene Signature Classifier for Poor Survival in Salivary Gland ACC. Cancers 15 (5) (2023)
Limin Jiang, Jijun Tang, Fei Guo, Yan Guo
Prediction of Major Histocompatibility Complex Binding with Bilateral and Variable Long Short Term Memory Networks. Biology 11 (6) (2022)
Fengyao Yan, Dan-Qian Chen, Jijun Tang, Ying-Yong Zhao, Yan Guo
Serum Metabolites Associated with Blood Pressure in Chronic Kidney Disease Patients. Metabolites 12 (4) (2022)
Yulin Dai, Hui Yu, Qiheng Yan, Bingrui Li, Andi Liu, Wendao Liu, Xiaoqian Jiang, Yejin Kim, Yan Guo, Zhong-Ming Zhao
Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments. Genes 13 (7) (2022)
Ellie Xi, Judy Bai, Klaira Zhang, Hui Yu, Yan Guo
Genomic Variants Disrupt miRNA-mRNA Regulation. Chemistry & biodiversity 19 (10) (2022)
Limin Jiang, Hui Yu, Scott A Ness, Peng Mao, Fei Guo, Jijun Tang, Yan Guo
Comprehensive Analysis of Co-Mutations Identifies Cooperating Mechanisms of Tumorigenesis. Cancers 14 (2) (2022)
Yuan-Ming Wu, Yan Guo, Hui Yu, Tao Guo
RNA editing affects cis-regulatory elements and predicts adverse cancer survival. Cancer medicine 10 (17) (2021)
Quanhu Sheng, Hui Yu, Mingrui Duan, Scott Ness, Jiapeng He, Huining Kang, Limin Jiang, John J Wyrick, Peng Mao, Yan Guo
A streamlined solution for processing, elucidating and quality control of cyclobutane pyrimidine dimer sequencing data. Nature protocols 16 (4) (2021)
Yan-Ni Wang, He-He Hu, Dan-Dan Zhang, Xia-Qing Wu, Jian-Ling Liu, Yan Guo, Hua Miao, Ying-Yong Zhao
The Dysregulation of Eicosanoids and Bile Acids Correlates with Impaired Kidney Function and Renal Fibrosis in Chronic Renal Failure. Metabolites 11 (2) (2021)
K Elaine Ritter, Dennis P Buehler, Stephanie B Asher, Karen K Deal, Shilin Zhao, Yan Guo, E Michelle Southard-Smith
5-HT3 Signaling Alters Development of Sacral Neural Crest Derivatives That Innervate the Lower Urinary Tract. International journal of molecular sciences 22 (13) (2021)
Christine M Pauken, Shelby Ray Kenney, Kathryn J Brayer, Yan Guo, Ursa A Brown-Glaberman, Dario Marchetti
Heterogeneity of Circulating Tumor Cell Neoplastic Subpopulations Outlined by Single-Cell Transcriptomics. Cancers 13 (19) (2021)
Limin Jiang, Fei Guo, Jijun Tang, Hui Yu, Scott Ness, Mingrui Duan, Peng Mao, Ying-Yong Zhao, Yan Guo
SBSA: an online service for somatic binding sequence annotation. Nucleic acids research (2021)
Hui Yu, Yan Guo, Jingchun Chen, Xiangning Chen, Peilin Jia, Zhong-Ming Zhao
Rewired Pathways and Disrupted Pathway Crosstalk in Schizophrenia Transcriptomes by Multiple Differential Coexpression Methods. Genes 12 (5) (2021)
Peter Simons, Yan Guo, Virginie Bondu, Susan L Tigert, Michelle Harkins, Samuel M Goodfellow, Cana Tompkins, Devon Chabot-Richards, Xuexian O Yang, Laura Gonzalez Bosc, Steven Bradfute, Daniel A Lawrence, Tione Buranda
Longitudinal Assessment of Cytokine Expression and Plasminogen Activation in Hantavirus Cardiopulmonary Syndrome Reveals Immune Regulatory Dysfunction in End-Stage Disease. Viruses 13 (8) (2021)
Limin Jiang, Mingrui Duan, Fei Guo, Jijun Tang, Olufunmilola Oybamiji, Hui Yu, Scott Ness, Ying-Yong Zhao, Peng Mao, Yan Guo
SMDB: pivotal somatic sequence alterations reprogramming regulatory cascades. NAR cancer 2 (4) (2020)
Limin Jiang, Fei Guo, Jijun Tang, Shuguan Leng, Scott A Ness, Fei Ye, Huining Kang, David C Samuels, Yan Guo
Global Autozygosity Is Associated with Cancer Risk, Mutational Signature and Prognosis. Cancers 12 (12) (2020)
Yan Guo, Hui Yu, Danqian Chen, Ying-Yong Zhao
Machine learning distilled metabolite biomarkers for early stage renal injury. Metabolomics : Official journal of the Metabolomic Society 16 (1) (2019)
Hui Yu, David C Samuels, Ying-Yong Zhao, Yan Guo
Architectures and accuracy of artificial neural network for disease classification from omics data. BMC genomics 20 (1) (2019)
Michelle J Ormseth, Joseph F Solus, Quanhu Shen, Fei Ye, Qiong Wu, Yan Guo, Annette M Oeser, Ryan M Allen, Kasey C Vickers, C Michael Stein
Development and Validation of a MicroRNA Panel to Differentiate Between Patients with Rheumatoid Arthritis or Systemic Lupus Erythematosus and Controls. The Journal of rheumatology 47 (2) (2019)
Yan Guo, Leng Han, Quanhu Shen
Recent Advances in High Throughput Sequencing Analysis. International journal of genomics 2017 (2017)
Yan Guo, Kasey Vickers, Yanhua Xiong, Shilin Zhao, Quanhu Sheng, Pan Zhang, Wanding Zhou, Charles R Flynn
Comprehensive evaluation of extracellular small RNA isolation methods from serum in high throughput sequencing. BMC genomics 18 (1) (2017)
Pan Zhang, Brian D Lehmann, Yu Shyr, Yan Guo
The Utilization of Formalin Fixed-Paraffin-Embedded Specimens in High Throughput Genomic Studies. International journal of genomics 2017 (2017)
Yan Guo, Quanhu Shen, David C Samuels, Brian D Lehmann, Joshua A Bauer, Jennifer Pietenpol, Yu Shyr
Corrigendum to "Comparative Study of Exome Copy Number Variation Estimation Tools Using Array Comparative Genomic Hybridization as Control". BioMed research international 2017 (2017)
Yan Guo, Jie Wu, Shilin Zhao, Fei Ye, Yinghao Su, Travis Clark, Quanhu Shen, Brian D Lehmann, Xiao-Ou Shu, Qiuyin Cai
RNA Sequencing of Formalin-Fixed, Paraffin-Embedded Specimens for Gene Expression Quantification and Data Mining. International journal of genomics 2016 (2016)
Charles F Spurlock, John T Tossberg, Yan Guo, Sarah P Collier, Philip S Crooke, Thomas M Aune
Expression and functions of long noncoding RNAs during human T helper cell differentiation. Nature communications 6 (2015)
Leng Han, Yan Guo, Zhixi Su, Siyuan Zheng, Zhi-xiang Lu
Advances in computational genomics. BioMed research international 2015 (2015)
Shilin Zhao, Yan Guo, Quanhu Shen, Yu Shyr
Advanced heat map and clustering analysis using heatmap3. BioMed research international 2014 (2014)
Yan Guo, Shilin Zhao, Fei Ye, Quanhu Shen, Yu Shyr
MultiRankSeq: multiperspective approach for RNAseq differential expression analysis and quality control. BioMed research international 2014 (2014)
Yan Guo, Jing He, Shilin Zhao, Hui Wu, Xue Zhong, Quanhu Shen, David C Samuels, Yu Shyr, Jirong Long
Illumina human exome genotyping array clustering and quality control. Nature protocols 9 (11) (2014)