Zhong-Ming Zhao (Zhongming Zhao)

ORCID

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 149

Top Venues

Genes

Nature communications

Research square

BMC medical imaging

This page only lists publications with an associated author ORCID identifier.

Publications

Min Hye Noh, Jin Muk Kang, Alexandra A Miller, Grace Nguyen, Minxin Huang, Ji Seon Shim, Alberto J Bueso-Perez, Sara A Murphy, Kimberly A Rivera-Caraballo, Yoshihiro Otani, Eunju Kim, Seung-Hee Yoo, Yuanqing Yan, Yeshavanth Banasavadi-Siddegowda, Hiroshi Nakashima, E Antonio Chiocca, Balveen Kaur, Zhong-Ming Zhao, Tae Jin Lee, Ji Young Yoo
Targeting IGF2-IGF1R Signaling to Reprogram the Tumor Microenvironment for Enhanced Viro-Immunotherapy. Neuro-oncology (2024)
Zhong-Ming Zhao, Andi Liu, Citu Citu, Nitesh Enduru, Xian Chen, Astrid Manuel, Tirthankar Sinha, Damian Gorski, Brisa Fernandes, Meifang Yu, Paul E Schulz, Lukas M Simon, Claudio Soto
Single-nucleus multiomics reveals the disrupted regulatory programs in three brain regions of sporadic early-onset Alzheimer's disease. Research square (2024)
Arseniy E Yuzhalin, Frank J Lowery, Yohei Saito, Xiangliang Yuan, Jun Yao, Yimin Duan, Jingzhen Ding, Sunil Acharya, Chenyu Zhang, Abigail Fajardo, Hao-Nien Chen, Yongkun Wei, Yutong Sun, Lin Zhang, Yi Xiao, Ping Li, Philip L Lorenzi, Jason T Huse, Huihui Fan, Zhong-Ming Zhao, Mien-Chie Hung, Dihua Yu
Astrocyte-induced Cdk5 expedites breast cancer brain metastasis by suppressing MHC-I expression to evade immune recognition. Nature cell biology (2024)
Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Zhong-Ming Zhao
Improved liver disease prediction from clinical data through an evaluation of ensemble learning approaches. BMC medical informatics and decision making 24 (1) (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Andi Liu, Citu Citu, Nitesh Enduru, Xian Chen, Astrid M Manuel, Tirthankar Sinha, Damian Gorski, Brisa S Fernandes, Meifang Yu, Paul E Schulz, Lukas M Simon, Claudio Soto, Zhong-Ming Zhao
Single-nucleus multiomics reveals the disrupted regulatory programs in three brain regions of sporadic early-onset Alzheimer's disease. bioRxiv : the preprint server for biology (2024)
Ling Yin, Xiaoding Hu, Guangsheng Pei, Mengfan Tang, You Zhou, Huimin Zhang, Min Huang, Siting Li, Jie Zhang, Citu Citu, Zhong-Ming Zhao, Bisrat G Debeb, Xu Feng, Junjie Chen
Genome-wide CRISPR screen reveals the synthetic lethality between BCL2L1 inhibition and radiotherapy. Life science alliance 7 (4) (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
Correction: VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Zhong-Ming Zhao
Improved liver disease prediction from clinical data through an evaluation of ensemble learning approaches. BMC medical informatics and decision making 24 (1) (2024)
Lincoln N Strickland, Wendao Liu, Usama Hussein, Nicolette Mardik, Xian Chen, Tingting W Mills, Lana A Vornik, Michelle I Savage, Shizuko Sei, John Clifford, Holger K Eltzschig, Powel H Brown, Zhong-Ming Zhao, Florencia McAllister, Jennifer M Bailey-Lundberg
Preventive Treatment with a CD73 Small Molecule Inhibitor Enhances Immune Surveillance in K-Ras Mutant Pancreatic Intraepithelial Neoplasia. Cancer prevention research (Philadelphia, Pa.) (2024)
Keith L Sanders, Astrid M Manuel, Andi Liu, Boyan Leng, Xiangning Chen, Zhong-Ming Zhao
Unveiling Gene Interactions in Alzheimer's Disease by Integrating Genetic and Epigenetic Data with a Network-Based Approach. Epigenomes 8 (2) (2024)
Xiangning Chen, Yimei Liu, Joan Cue, Mira Han, Vishwajit Nimgaonkar, Daniel R Weinberger, Shizhong Han, Zhong-Ming Zhao, Jingchun Chen
Classification of Schizophrenia, Bipolar Disorder and Major Depressive Disorder with Comorbid Traits and Deep Learning Algorithms. Research square (2024)
Benjamin Cathcart, Sirisha M Cheedipudi, Leila Rouhi, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
DNA double-stranded breaks, a hallmark of aging, defined at the nucleotide resolution, are increased and associated with transcription in the cardiac myocytes in LMNA-cardiomyopathy. Cardiovascular research (2024)
Ling Yin, Xiaoding Hu, Guangsheng Pei, Mengfan Tang, You Zhou, Huimin Zhang, Min Huang, Siting Li, Jie Zhang, Citu Citu, Zhong-Ming Zhao, Bisrat G Debeb, Xu Feng, Junjie Chen
Genome-wide CRISPR screen reveals the synthetic lethality between BCL2L1 inhibition and radiotherapy. Life science alliance 7 (4) (2024)
Xiangning Chen, Yimei Liu, Joan Cue, Mira Han, Vishwajit Nimgaonkar, Daniel R Weinberger, Shizhong Han, Zhong-Ming Zhao, Jingchun Chen
Classification of Schizophrenia, Bipolar Disorder and Major Depressive Disorder with Comorbid Traits and Deep Learning Algorithms. Research square (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Nitesh Enduru, Brisa S Fernandes, Shahram Bahrami, Yulin Dai, Ole Andreas Andreassen, Zhong-Ming Zhao
Genetic overlap between Alzheimer's disease and immune-mediated diseases: an atlas of shared genetic determinants and biological convergence. Molecular psychiatry (2024)
Fangfang Yan, Akiko Suzuki, Chihiro Iwaya, Guangsheng Pei, Xian Chen, Hiroki Yoshioka, Meifang Yu, Lukas M Simon, Junichi Iwata, Zhong-Ming Zhao
Single-cell multiomics decodes regulatory programs for mouse secondary palate development. Nature communications 15 (1) (2024)
Min Hye Noh, Jin Muk Kang, Alexandra A Miller, Grace Nguyen, Minxin Huang, Ji Seon Shim, Alberto J Bueso-Perez, Sara A Murphy, Kimberly A Rivera-Caraballo, Yoshihiro Otani, Eunju Kim, Seung-Hee Yoo, Yuanqing Yan, Yeshavanth Banasavadi-Siddegowda, Hiroshi Nakashima, E Antonio Chiocca, Balveen Kaur, Zhong-Ming Zhao, Tae Jin Lee, Ji Young Yoo
Targeting IGF2-IGF1R Signaling to Reprogram the Tumor Microenvironment for Enhanced Viro-Immunotherapy. Neuro-oncology (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Fangfang Yan, Akiko Suzuki, Chihiro Iwaya, Guangsheng Pei, Xian Chen, Hiroki Yoshioka, Meifang Yu, Lukas M Simon, Junichi Iwata, Zhong-Ming Zhao
Single-cell multiomics decodes regulatory programs for mouse secondary palate development. Nature communications 15 (1) (2024)
Benjamin Cathcart, Sirisha M Cheedipudi, Leila Rouhi, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
DNA double-stranded breaks, a hallmark of aging, defined at the nucleotide resolution, are increased and associated with transcription in the cardiac myocytes in LMNA-cardiomyopathy. Cardiovascular research (2024)
Wei Ruan, Tao Li, Jaewoong Lee, In Hyuk Bang, Wankun Deng, Xinxin Ma, Seung-Hee Yoo, Boyun Kim, Jiwen Li, Xiaoyi Yuan, Yu A An, Yin-Ying Wang, Yafen Liang, Matthew Deberge, Dongze Zhang, Zhen Zhou, Yanyu Wang, Joshua M Gorham, Jonathan G Seidman, Christine E Seidman, Sary F Aranki, Ragini Nair, Lei Li, Jagat Narula, Zhong-Ming Zhao, Alemayehu Abebe Gorfe, Jochen Daniel Muehlschlegel, Kuang-Lei Tsai, Holger K Eltzschig
The BMAL1/HIF2A heterodimer modulates circadian variations of myocardial injury. Research square (2024)
Ashutosh Tripathi, Alona Bartosh, Jocelyn Mata, Chale Jacks, Amit Kumar Madeshiya, Usama Hussein, L Elliot Hong, Zhong-Ming Zhao, Anilkumar Pillai
Microglial type I interferon signaling mediates chronic stress-induced synapse loss and social behavior deficits. Molecular psychiatry (2024)
Wendao Liu, Zhong-Ming Zhao
Scupa: Single-cell unified polarization assessment of immune cells using the single-cell foundation model. bioRxiv : the preprint server for biology (2024)
Keith L Sanders, Astrid M Manuel, Andi Liu, Boyan Leng, Xiangning Chen, Zhong-Ming Zhao
Unveiling Gene Interactions in Alzheimer's Disease by Integrating Genetic and Epigenetic Data with a Network-Based Approach. Epigenomes 8 (2) (2024)
Ling Yin, Xiaoding Hu, Guangsheng Pei, Mengfan Tang, You Zhou, Huimin Zhang, Min Huang, Siting Li, Jie Zhang, Citu Citu, Zhong-Ming Zhao, Bisrat G Debeb, Xu Feng, Junjie Chen
Genome-wide CRISPR screen reveals the synthetic lethality between BCL2L1 inhibition and radiotherapy. Life science alliance 7 (4) (2024)
Zhong-Ming Zhao, Andi Liu, Citu Citu, Nitesh Enduru, Xian Chen, Astrid Manuel, Tirthankar Sinha, Damian Gorski, Brisa Fernandes, Meifang Yu, Paul E Schulz, Lukas M Simon, Claudio Soto
Single-nucleus multiomics reveals the disrupted regulatory programs in three brain regions of sporadic early-onset Alzheimer's disease. Research square (2024)
Fangfang Yan, Akiko Suzuki, Chihiro Iwaya, Guangsheng Pei, Xian Chen, Hiroki Yoshioka, Meifang Yu, Lukas M Simon, Junichi Iwata, Zhong-Ming Zhao
Single-cell multiomics decodes regulatory programs for mouse secondary palate development. Nature communications 15 (1) (2024)
Xiangning Chen, Yimei Liu, Joan Cue, Mira Han Vishwajit Nimgaonkar, Daniel R Weinberger, Shizhong Han, Zhong-Ming Zhao, Jingchun Chen
Classification of Schizophrenia, Bipolar Disorder and Major Depressive Disorder with Comorbid Traits and Deep Learning Algorithms. Research square (2024)
Keith L Sanders, Astrid M Manuel, Andi Liu, Boyan Leng, Xiangning Chen, Zhong-Ming Zhao
Unveiling Gene Interactions in Alzheimer's Disease by Integrating Genetic and Epigenetic Data with a Network-Based Approach. Epigenomes 8 (2) (2024)
Lincoln N Strickland, Wendao Liu, Usama Hussein, Nicolette Mardik, Xian Chen, Tingting W Mills, Lana A Vornik, Michelle I Savage, Shizuko Sei, John Clifford, Holger K Eltzschig, Powel H Brown, Zhong-Ming Zhao, Florencia McAllister, Jennifer M Bailey-Lundberg
Preventive Treatment with a CD73 Small Molecule Inhibitor Enhances Immune Surveillance in K-Ras Mutant Pancreatic Intraepithelial Neoplasia. Cancer prevention research (Philadelphia, Pa.) (2024)
Nitesh Enduru, Brisa S Fernandes, Shahram Bahrami, Yulin Dai, Ole Andreas Andreassen, Zhong-Ming Zhao
Genetic overlap between Alzheimer's disease and immune-mediated diseases: an atlas of shared genetic determinants and biological convergence. Molecular psychiatry (2024)
Benjamin Cathcart, Sirisha M Cheedipudi, Leila Rouhi, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
DNA double-stranded breaks, a hallmark of aging, defined at the nucleotide resolution, are increased and associated with transcription in the cardiac myocytes in LMNA-cardiomyopathy. Cardiovascular research (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
Correction: VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Fangfang Yan, Akiko Suzuki, Chihiro Iwaya, Guangsheng Pei, Xian Chen, Hiroki Yoshioka, Meifang Yu, Lukas M Simon, Junichi Iwata, Zhong-Ming Zhao
Single-cell multiomics decodes regulatory programs for mouse secondary palate development. Nature communications 15 (1) (2024)
Holger K Eltzschig, Wei Ruan, Tao Li, Jaewoong Lee, In Hyuk Bang, Wankun Deng, Xinxin Ma, Seung-Hee Yoo, Boyun Kim, Jiwen Li, Xiaoyi Yuan, Yu An, Yin-Ying Wang, Yafen Liang, Matthew Deberge, Dongze Zhang, Zhen Zhou, Yanyu Wang, Joshua M Gorham, Jonathan G Seidman, Christine E Seidman, Sary Aranki, Ragini Nair, Lei Li, Jagat Narula, Zhong-Ming Zhao, Alemayehu Abebe Gorfe, Jochen Muehlschlegel, Kuang-Lei Tsai
The BMAL1/HIF2A heterodimer modulates circadian variations of myocardial injury. Research square (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
Correction: VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Ling Yin, Xiaoding Hu, Guangsheng Pei, Mengfan Tang, You Zhou, Huimin Zhang, Min Huang, Siting Li, Jie Zhang, Citu Citu, Zhong-Ming Zhao, Bisrat G Debeb, Xu Feng, Junjie Chen
Genome-wide CRISPR screen reveals the synthetic lethality between BCL2L1 inhibition and radiotherapy. Life science alliance 7 (4) (2024)
Anindita Saha, Shahid Mohammad Ganie, Pijush Kanti Dutta Pramanik, Rakesh Kumar Yadav, Saurav Mallik, Zhong-Ming Zhao
VER-Net: a hybrid transfer learning model for lung cancer detection using CT scan images. BMC medical imaging 24 (1) (2024)
Min Hye Noh, Jin Muk Kang, Alexandra A Miller, Grace Nguyen, Minxin Huang, Ji Seon Shim, Alberto J Bueso-Perez, Sara A Murphy, Kimberly A Rivera-Caraballo, Yoshihiro Otani, Eunju Kim, Seung-Hee Yoo, Yuanqing Yan, Yeshavanth Banasavadi-Siddegowda, Hiroshi Nakashima, E Antonio Chiocca, Balveen Kaur, Zhong-Ming Zhao, Tae Jin Lee, Ji Young Yoo
Targeting IGF2-IGF1R Signaling to Reprogram the Tumor Microenvironment for Enhanced Viro-Immunotherapy. Neuro-oncology (2024)
Andi Liu, Citu Citu, Nitesh Enduru, Xian Chen, Astrid M Manuel, Tirthankar Sinha, Damian Gorski, Brisa S Fernandes, Meifang Yu, Paul E Schulz, Lukas M Simon, Claudio Soto, Zhong-Ming Zhao
Single-nucleus multiomics reveals the disrupted regulatory programs in three brain regions of sporadic early-onset Alzheimer's disease. bioRxiv : the preprint server for biology (2024)
Elena Valeryevna Feofanova, Michael R Brown, Taryn Alkis, Astrid M Manuel, Xihao Li, Usman A Tahir, Zilin Li, Kevin M Mendez, Rachel S Kelly, Qibin Qi, Han Chen, Martin G Larson, Rozenn N Lemaitre, Alanna C Morrison, Charles Grieser, Kari E Wong, Robert E Gerszten, Zhong-Ming Zhao, Jessica Lasky-Su, null null, Bing Yu
Author Correction: Whole-Genome Sequencing Analysis of Human Metabolome in Multi-Ethnic Populations. Nature communications 14 (1) (2023)
Brisa S Fernandes, Nitesh Enduru, Brisa Fernandes, Shahram Bahrami, Yulin Dai, Ole Andreas Andreassen, Zhong-Ming Zhao
Genetic overlap between Alzheimer's disease and immune-mediated diseases: An atlas of shared genetic determinants and biological convergence. Research square (2023)
Karam Kumar Sahoo, Muhammad Fazal Ijaz, Saurav Mallik, Arup Roy, Pawan Kumar Singh, Zhong-Ming Zhao
Wrapper-based deep feature optimization for activity recognition in the wearable sensor networks of healthcare systems. Scientific reports 13 (1) (2023)
Bangxing Hong, Upasana Sahu, Matthew P Mullarkey, Evan Hong, Guangsheng Pei, Yuanqing Yan, Yoshihiro Otani, Yeshavanth Banasavadi-Siddegowda, Huihui Fan, Zhong-Ming Zhao, Jianhua Yu, Michael A Caligiuri, Balveen Kaur
PKR induces TGF-β and limits oncolytic immune therapy. Journal for immunotherapy of cancer 11 (2) (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
An Xu, Mo Liu, Mo-Fan Huang, Yang Zhang, Ruifeng Hu, Julian A Gingold, Ying Liu, Dandan Zhu, Chian-Shiu Chien, Wei-Chen Wang, Zian Liao, Fei Yuan, Chih-Wei Hsu, Jian Tu, Yao Yu, Taylor Rosen, Feng Xiong, Peilin Jia, Yi-Ping Yang, Danielle A Bazer, Ya-Wen Chen, Wenbo Li, Chad D Huff, Jay-Jiguang Zhu, Francesca Aguilo, Shih-Hwa Chiou, Nathan C Boles, Chien-Chen Lai, Mien-Chie Hung, Zhong-Ming Zhao, Eric L Van Nostrand, Ruiying Zhao, Dung-Fang Lee
Rewired m 6 A epitranscriptomic networks link mutant p53 to neoplastic transformation. Nature communications 14 (1) (2023)
Erika Y Faraoni, Kanchan Singh, Vidhi Chandra, Olivereen Le Roux, Yulin Dai, Ismet Sahin, Baylee J O'Brien, Lincoln N Strickland, Le Li, Emily Vucic, Amanda N Warner, Melissa Pruski, Trent Clark, George Van Buren, Nirav C Thosani, J Steve Bynon, Curtis J Wray, Dafna Bar-Sagi, Kyle Lauren Poulsen, Lana A Vornik, Michelle I Savage, Shizuko Sei, Altaf Mohammed, Zhong-Ming Zhao, Powel H Brown, Tingting W Mills, Holger K Eltzschig, Florencia McAllister, Jennifer M Bailey-Lundberg
CD73-dependent adenosine signaling through Adora2b drives immunosuppression in ductal pancreatic cancer. Cancer research (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Soumen Kumar Pati, Manan Kumar Gupta, Ayan Banerjee, Saurav Mallik, Zhong-Ming Zhao
PPIGCF: A Protein-Protein Interaction-Based Gene Correlation Filter for Optimal Gene Selection. Genes 14 (5) (2023)
Toshiyuki Itai, Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhong-Ming Zhao
De novo mutations disturb early brain development more frequently than common variants in schizophrenia. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 192 (3-4) (2023)
Nephi A Walton, Radha Nagarajan, Chen Wang, Murat Sincan, Robert R Freimuth, David B Everman, Derek C Walton, Scott P McGrath, Dominick J Lemas, Panayiotis V Benos, Alexander V Alekseyenko, Qianqian Song, Ece Gamsiz Uzun, Casey Overby Taylor, Alper Uzun, Thomas Nate Person, Nadav Rappoport, Zhong-Ming Zhao, Marc S Williams
Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup. Journal of the American Medical Informatics Association : JAMIA (2023)
Toshiyuki Itai, Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhong-Ming Zhao
De novo mutations disturb early brain development more frequently than common variants in schizophrenia. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 192 (3-4) (2023)
Yuxuan Che, Yang Liu, Yijing Li, Joseph McIntosh, Alexa Jordan, Fangfang Yan, Wei Wang, Lei Nie, Heng-Huan Lee, Jingling Jin, Yixin Yao, Zhong-Ming Zhao, Vivian Changying Jiang, Michael L Wang
Dual targeting of CDK4/6 and Bcl-2 exhibits a potent anti-tumor effect on mantle cell lymphoma. Blood advances (2023)
Huihui Fan, Feng Wang, Andy Zeng, Alex Murison, Katarzyna Tomczak, Dapeng Hao, Fatima Zahra Jelloul, Bofei Wang, Praveen Barrodia, Shaoheng Liang, Ken Chen, Linghua Wang, Zhong-Ming Zhao, Kunal Rai, Abhinav K Jain, John Dick, Naval Daver, P Andrew Futreal, Hussein A Abbas
Single-cell chromatin accessibility profiling of acute myeloid leukemia reveals heterogeneous lineage composition upon therapy-resistance. Communications biology 6 (1) (2023)
Karam Kumar Sahoo, Muhammad Fazal Ijaz, Saurav Mallik, Arup Roy, Pawan Kumar Singh, Zhong-Ming Zhao
Wrapper-based deep feature optimization for activity recognition in the wearable sensor networks of healthcare systems. Scientific reports 13 (1) (2023)
Mingqiang Wang, Wankun Deng, David C Samuels, Zhong-Ming Zhao, Lukas M Simon
MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data. Genes 14 (6) (2023)
Toshiyuki Itai, Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhong-Ming Zhao
De novo mutations disturb early brain development more frequently than common variants in schizophrenia. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics (2023)
Karam Kumar Sahoo, Muhammad Fazal Ijaz, Saurav Mallik, Arup Roy, Pawan Kumar Singh, Zhong-Ming Zhao
Wrapper-based deep feature optimization for activity recognition in the wearable sensor networks of healthcare systems. Scientific reports 13 (1) (2023)
An Xu, Mo Liu, Mo-Fan Huang, Yang Zhang, Ruifeng Hu, Julian A Gingold, Ying Liu, Dandan Zhu, Chian-Shiu Chien, Wei-Chen Wang, Zian Liao, Fei Yuan, Chih-Wei Hsu, Jian Tu, Yao Yu, Taylor Rosen, Feng Xiong, Peilin Jia, Yi-Ping Yang, Danielle A Bazer, Ya-Wen Chen, Wenbo Li, Chad D Huff, Jay-Jiguang Zhu, Francesca Aguilo, Shih-Hwa Chiou, Nathan C Boles, Chien-Chen Lai, Mien-Chie Hung, Zhong-Ming Zhao, Eric L Van Nostrand, Ruiying Zhao, Dung-Fang Lee
Rewired m 6 A epitranscriptomic networks link mutant p53 to neoplastic transformation. Nature communications 14 (1) (2023)
Peilin Jia, Ruifeng Hu, Zhong-Ming Zhao
Benchmark of embedding-based methods for accurate and transferable prediction of drug response. Briefings in bioinformatics (2023)
Erika Y Faraoni, Kanchan Singh, Vidhi Chandra, Olivereen Le Roux, Yulin Dai, Ismet Sahin, Baylee J O'Brien, Lincoln N Strickland, Le Li, Emily Vucic, Amanda N Warner, Melissa Pruski, Trent Clark, George Van Buren, Nirav C Thosani, J Steve Bynon, Curtis J Wray, Dafna Bar-Sagi, Kyle Lauren Poulsen, Lana A Vornik, Michelle I Savage, Shizuko Sei, Altaf Mohammed, Zhong-Ming Zhao, Powel H Brown, Tingting W Mills, Holger K Eltzschig, Florencia McAllister, Jennifer M Bailey-Lundberg
CD73-dependent adenosine signaling through Adora2b drives immunosuppression in ductal pancreatic cancer. Cancer research (2023)
An Xu, Mo Liu, Mo-Fan Huang, Yang Zhang, Ruifeng Hu, Julian A Gingold, Ying Liu, Dandan Zhu, Chian-Shiu Chien, Wei-Chen Wang, Zian Liao, Fei Yuan, Chih-Wei Hsu, Jian Tu, Yao Yu, Taylor Rosen, Feng Xiong, Peilin Jia, Yi-Ping Yang, Danielle A Bazer, Ya-Wen Chen, Wenbo Li, Chad D Huff, Jay-Jiguang Zhu, Francesca Aguilo, Shih-Hwa Chiou, Nathan C Boles, Chien-Chen Lai, Mien-Chie Hung, Zhong-Ming Zhao, Eric L Van Nostrand, Ruiying Zhao, Dung-Fang Lee
Rewired m 6 A epitranscriptomic networks link mutant p53 to neoplastic transformation. Nature communications 14 (1) (2023)
Mingqiang Wang, Wankun Deng, David C Samuels, Zhong-Ming Zhao, Lukas M Simon
MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data. Genes 14 (6) (2023)
Wei-Qi Wei, Christopher Guardo, Srushti Gandireddy, Chao Yan, Henry Ong, Vern Kerchberger, Alyson L Dickson, Emily Rose Pfaff, Hiral Master, Melissa Basford, Nguyen Tran, Salvatore Mancuso, Toufeeq Syed, Zhong-Ming Zhao, QiPing Feng, Melissa A Haendel, Christopher Lunt, Geoffrey S Ginsburg, Christopher G Chute, Joshua Denny, Dan Roden
Genetic and Survey Data Improves Performance of Machine Learning Model for Long COVID. Research square (2023)
Bangxing Hong, Upasana Sahu, Matthew P Mullarkey, Evan Hong, Guangsheng Pei, Yuanqing Yan, Yoshihiro Otani, Yeshavanth Banasavadi-Siddegowda, Huihui Fan, Zhong-Ming Zhao, Jianhua Yu, Michael A Caligiuri, Balveen Kaur
PKR induces TGF-β and limits oncolytic immune therapy. Journal for immunotherapy of cancer 11 (2) (2023)
Mingqiang Wang, Wankun Deng, David C Samuels, Zhong-Ming Zhao, Lukas M Simon
MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data. Genes 14 (6) (2023)
Xiaoyang Li, Brisa S Fernandes, Andi Liu, Yimei Lu, Jingchun Chen, Zhong-Ming Zhao, Yulin Dai
Genetically-regulated pathway-polygenic risk score (GRPa-PRS): A risk stratification method to identify genetically regulated pathways in polygenic diseases. medRxiv : the preprint server for health sciences (2023)
Erika Y Faraoni, Kanchan Singh, Vidhi Chandra, Olivereen Le Roux, Yulin Dai, Ismet Sahin, Baylee J O'Brien, Lincoln N Strickland, Le Li, Emily Vucic, Amanda N Warner, Melissa Pruski, Trent Clark, George Van Buren, Nirav C Thosani, J Steve Bynon, Curtis J Wray, Dafna Bar-Sagi, Kyle Lauren Poulsen, Lana A Vornik, Michelle I Savage, Shizuko Sei, Altaf Mohammed, Zhong-Ming Zhao, Powel H Brown, Tingting W Mills, Holger K Eltzschig, Florencia McAllister, Jennifer M Bailey-Lundberg
CD73-dependent adenosine signaling through Adora2b drives immunosuppression in ductal pancreatic cancer. Cancer research (2023)
Erika Y Faraoni, Kanchan Singh, Vidhi Chandra, Olivereen Le Roux, Yulin Dai, Ismet Sahin, Baylee J O'Brien, Lincoln N Strickland, Le Li, Emily Vucic, Amanda N Warner, Melissa Pruski, Trent Clark, George Van Buren, Nirav C Thosani, J Steve Bynon, Curtis J Wray, Dafna Bar-Sagi, Kyle Lauren Poulsen, Lana A Vornik, Michelle I Savage, Shizuko Sei, Altaf Mohammed, Zhong-Ming Zhao, Powel H Brown, Tingting W Mills, Holger K Eltzschig, Florencia McAllister, Jennifer M Bailey-Lundberg
CD73-dependent adenosine signaling through Adora2b drives immunosuppression in ductal pancreatic cancer. Cancer research (2023)
Mingqiang Wang, Wankun Deng, David C Samuels, Zhong-Ming Zhao, Lukas M Simon
MitoTrace: A Computational Framework for Analyzing Mitochondrial Variation in Single-Cell RNA Sequencing Data. Genes 14 (6) (2023)
Wendao Liu, Wenbo Li, Zhong-Ming Zhao
Single-cell transcriptomics reveals pre-existing COVID-19 vulnerability factors in lung cancer patients. Molecular cancer research : MCR (2023)
Karam Kumar Sahoo, Muhammad Fazal Ijaz, Saurav Mallik, Arup Roy, Pawan Kumar Singh, Zhong-Ming Zhao
Wrapper-based deep feature optimization for activity recognition in the wearable sensor networks of healthcare systems. Scientific reports 13 (1) (2023)
Bangxing Hong, Upasana Sahu, Matthew P Mullarkey, Evan Hong, Guangsheng Pei, Yuanqing Yan, Yoshihiro Otani, Yeshavanth Banasavadi-Siddegowda, Huihui Fan, Zhong-Ming Zhao, Jianhua Yu, Michael A Caligiuri, Balveen Kaur
PKR induces TGF-β and limits oncolytic immune therapy. Journal for immunotherapy of cancer 11 (2) (2023)
Toshiyuki Itai, Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhong-Ming Zhao
De novo mutations disturb early brain development more frequently than common variants in schizophrenia. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 192 (3-4) (2023)
Melis Olcum, Leila Rouhi, Siyang Fan, Maya M Gonzales, Hyun-Hwan Jeong, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
PANoptosis is a prominent feature of desmoplakin cardiomyopathy. The journal of cardiovascular aging 3 (1) (2023)
Toshiyuki Itai, Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhong-Ming Zhao
De novo mutations disturb early brain development more frequently than common variants in schizophrenia. American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics 192 (3-4) (2023)
Melis Olcum, Leila Rouhi, Siyang Fan, Maya M Gonzales, Hyun-Hwan Jeong, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
PANoptosis is a prominent feature of desmoplakin cardiomyopathy. The journal of cardiovascular aging 3 (1) (2023)
Elena Valeryevna Feofanova, Michael R Brown, Taryn Alkis, Astrid M Manuel, Xihao Li, Usman A Tahir, Zilin Li, Kevin M Mendez, Rachel S Kelly, Qibin Qi, Han Chen, Martin G Larson, Rozenn N Lemaitre, Alanna C Morrison, Charles Grieser, Kari E Wong, Robert E Gerszten, Zhong-Ming Zhao, Jessica Lasky-Su, null null, Bing Yu
Whole-Genome Sequencing Analysis of Human Metabolome in Multi-Ethnic Populations. Nature communications 14 (1) (2023)
Melis Olcum, Leila Rouhi, Siyang Fan, Maya M Gonzales, Hyun-Hwan Jeong, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
PANoptosis is a prominent feature of desmoplakin cardiomyopathy. The journal of cardiovascular aging 3 (1) (2023)
Haodong Xu, Ruifeng Hu, Zhong-Ming Zhao
DegronMD: Leveraging evolutionary and structural features for deciphering protein-targeted degradation, mutations, and drug response to degrons. Molecular biology and evolution (2023)
Melis Olcum, Leila Rouhi, Siyang Fan, Maya M Gonzales, Hyun-Hwan Jeong, Zhong-Ming Zhao, Priyatansh Gurha, Ali J Marian
PANoptosis is a prominent feature of desmoplakin cardiomyopathy. The journal of cardiovascular aging 3 (1) (2023)
Bangxing Hong, Upasana Sahu, Matthew P Mullarkey, Evan Hong, Guangsheng Pei, Yuanqing Yan, Yoshihiro Otani, Yeshavanth Banasavadi-Siddegowda, Huihui Fan, Zhong-Ming Zhao, Jianhua Yu, Michael A Caligiuri, Balveen Kaur
PKR induces TGF-β and limits oncolytic immune therapy. Journal for immunotherapy of cancer 11 (2) (2023)
Gang Li, Xin Li, Li Yang, Shuyue Wang, Yulin Dai, Baharan Fekry, Lucas Veillon, Lin Tan, Rebecca Berdeaux, Kristin Eckel-Mahan, Philip L Lorenzi, Zhong-Ming Zhao, Richard Lehner, Kai Sun
Adipose tissue-specific ablation of Ces1d causes metabolic dysregulation in mice. Life science alliance 5 (8) (2022)
Tapas Bhadra, Saurav Mallik, Neaj Hasan, Zhong-Ming Zhao
Comparison of five supervised feature selection algorithms leading to top features and gene signatures from multi-omics data in cancer. BMC bioinformatics 23 (Suppl 3) (2022)
Peilin Jia, Ruifeng Hu, Fangfang Yan, Yulin Dai, Zhong-Ming Zhao
scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies. Genome biology 23 (1) (2022)
Divya Ravirala, Brandon Mistretta, Preethi H Gunaratne, Guangsheng Pei, Zhong-Ming Zhao, Xiaoliu Zhang
Co-delivery of novel bispecific and trispecific engagers by an amplicon vector augments the therapeutic effect of an HSV-based oncolytic virotherapy. Journal for immunotherapy of cancer 9 (7) (2022)
Yulin Dai, Peilin Jia, Zhong-Ming Zhao, Assaf Gottlieb
A Method for Bridging Population-Specific Genotypes to Detect Gene Modules Associated with Alzheimer's Disease. Cells 11 (14) (2022)
Andi Liu, Astrid M Manuel, Yulin Dai, Brisa S Fernandes, Nitesh Enduru, Peilin Jia, Zhong-Ming Zhao
Identifying candidate genes and drug targets for Alzheimer's disease by an integrative network approach using genetic and brain region-specific proteomic data. Human molecular genetics 31 (19) (2022)
Litong Nie, Chao Wang, Xiaoguang Liu, Hongqi Teng, Siting Li, Min Huang, Xu Feng, Guangsheng Pei, Qinglei Hang, Zhong-Ming Zhao, Boyi Gan, Li Ma, Junjie Chen
USP7 substrates identified by proteomics analysis reveal the specificity of USP7. Genes & development 36 (17-18) (2022)
Azim Pothiawala, Berke E Sahbazoglu, Bryan K Ang, Nadine Matthias, Guangsheng Pei, Qing Yan, Brian R Davis, Johnny Huard, Zhong-Ming Zhao, Naoki Nakayama
GDF5+ chondroprogenitors derived from human pluripotent stem cells preferentially form permanent chondrocytes. Development (Cambridge, England) 149 (11) (2022)
Yoshihiro Otani, Ji Young Yoo, Cole T Lewis, Samantha Chao, Jessica Swanner, Toshihiko Shimizu, Jin Muk Kang, Sara A Murphy, Kimberly Rivera-Caraballo, Bangxing Hong, Joseph C Glorioso, Hiroshi Nakashima, Sean E Lawler, Yeshavanth Kumar Banasavadi-Siddegowda, John D Heiss, Yuanqing Yan, Guangsheng Pei, Michael A Caligiuri, Zhong-Ming Zhao, E Antonio Chiocca, Jianhua Yu, Balveen Kaur
NOTCH-Induced MDSC Recruitment after oHSV Virotherapy in CNS Cancer Models Modulates Antitumor Immunotherapy. Clinical cancer research : an official journal of the American Association for Cancer Research 28 (7) (2022)
Yulin Dai, Hui Yu, Qiheng Yan, Bingrui Li, Andi Liu, Wendao Liu, Xiaoqian Jiang, Yejin Kim, Yan Guo, Zhong-Ming Zhao
Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments. Genes 13 (7) (2022)
Chao-Ji Shi, Yanli Yao, Guizhu Yang, Guo-Pei Zhu, Zhen Tian, Rui Wang, Qi Wu, Yujue Wang, Yaping Wu, Lan Chen, Chong Wang, Jiamin Gao, Xindan Kang, Jie Zhang, Lizhen Wang, Shengzhong Duan, Zhong-Ming Zhao, Zhiyuan Zhang, Shuyang Sun
Pharmacogenomic landscape of head and neck squamous cell carcinoma informs precision oncology therapy. Science translational medicine 14 (661) (2022)
Jian Tu, Zijun Huo, Yao Yu, Dandan Zhu, An Xu, Mo-Fan Huang, Ruifeng Hu, Ruoyu Wang, Julian A Gingold, Yi-Hung Chen, Kuang-Lei Tsai, Nicolas R Forcioli-Conti, Sarah X L Huang, Thomas R Webb, Jie Su, Danielle A Bazer, Peilin Jia, Jason T Yustein, Lisa L Wang, Mien-Chie Hung, Zhong-Ming Zhao, Chad D Huff, Jingnan Shen, Ruiying Zhao, Dung-Fang Lee
Hereditary retinoblastoma iPSC model reveals aberrant spliceosome function driving bone malignancies. Proceedings of the National Academy of Sciences of the United States of America 119 (16) (2022)
Andi Liu, Astrid M Manuel, Yulin Dai, Zhong-Ming Zhao
Prioritization of risk genes in multiple sclerosis by a refined Bayesian framework followed by tissue-specificity and cell type feature assessment. BMC genomics 23 (Suppl 4) (2022)
Yulin Dai, Ruifeng Hu, Andi Liu, Kyung Serk Cho, Astrid Marilyn Manuel, Xiaoyang Li, Xianjun Dong, Peilin Jia, Zhong-Ming Zhao
WebCSEA: web-based cell-type-specific enrichment analysis of genes. Nucleic acids research (2022)
Xu Feng, Mengfan Tang, Merve Dede, Dan Su, Guangsheng Pei, Dadi Jiang, Chao Wang, Zhen Chen, Mi Li, Litong Nie, Yun Xiong, Siting Li, Jeong-Min Park, Huimin Zhang, Min Huang, Klaudia Szymonowicz, Zhong-Ming Zhao, Traver Hart, Junjie Chen
Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors. Science advances 8 (19) (2022)

Zhong-Ming Zhao.css-eqlu8i{font-size:small;padding-left:4px;} (Zhongming Zhao)

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Zhong-Ming Zhao (Zhongming Zhao)