Ying Xu (Y Xu)

ResearcherID ORCID

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 38

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Cell research

Cell death & disease

eLife

Soochow University

University of Tokyo (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Soochow University

China

Professor :: CAM-SU GRC

Nanjing University

China

Professor :: Model Animal Research Center

University of California San Francisco

United States

Postdoctoral fellow :: Neuroscience

Education History

University of Tokyo Apr 01 1997 - Mar 30 2001

Japan

PHD :: Medical School

Publications

Zichen Wang, Jing Yu, Muyue Zhai, Zehua Wang, Kaiwen Sheng, Yu Zhu, Tianyu Wang, Mianzhi Liu, Lu Wang, Miao Yan, Jue Zhang, Ying Xu, Xianhua Wang, Lei Ma, Wei Hu, Heping Peace Cheng
System-level time computation and representation in the suprachiasmatic nucleus revealed by large-scale calcium imaging and machine learning. Cell research 34 (7) (2024)
Renrui Chen, Ziang Zhang, Junjie Ma, Bing Liu, Zhengyun Huang, Ganlu Hu, Ju Huang, Ying Xu, Guang-Zhong Wang
Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions. Communications biology 7 (1) (2024)
Zichen Wang, Jing Yu, Muyue Zhai, Zehua Wang, Kaiwen Sheng, Yu Zhu, Tianyu Wang, Mianzhi Liu, Lu Wang, Miao Yan, Jue Zhang, Ying Xu, Xianhua Wang, Lei Ma, Wei Hu, Heping Peace Cheng
System-level time computation and representation in the suprachiasmatic nucleus revealed by large-scale calcium imaging and machine learning. Cell research 34 (7) (2024)
Zichen Wang, Jing Yu, Muyue Zhai, Zehua Wang, Kaiwen Sheng, Yu Zhu, Tianyu Wang, Mianzhi Liu, Lu Wang, Miao Yan, Jue Zhang, Ying Xu, Xianhua Wang, Lei Ma, Wei Hu, Heping Peace Cheng
System-level time computation and representation in the suprachiasmatic nucleus revealed by large-scale calcium imaging and machine learning. Cell research (2024)
Zichen Wang, Jing Yu, Muyue Zhai, Zehua Wang, Kaiwen Sheng, Yu Zhu, Tianyu Wang, Mianzhi Liu, Lu Wang, Miao Yan, Jue Zhang, Ying Xu, Xianhua Wang, Lei Ma, Wei Hu, Heping Peace Cheng
System-level time computation and representation in the suprachiasmatic nucleus revealed by large-scale calcium imaging and machine learning. Cell research 34 (7) (2024)
Renrui Chen, Ziang Zhang, Junjie Ma, Bing Liu, Zhengyun Huang, Ganlu Hu, Ju Huang, Ying Xu, Guang-Zhong Wang
Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions. Communications biology 7 (1) (2024)
Zichen Wang, Jing Yu, Muyue Zhai, Zehua Wang, Kaiwen Sheng, Yu Zhu, Tianyu Wang, Mianzhi Liu, Lu Wang, Miao Yan, Jue Zhang, Ying Xu, Xianhua Wang, Lei Ma, Wei Hu, Heping Peace Cheng
System-level time computation and representation in the suprachiasmatic nucleus revealed by large-scale calcium imaging and machine learning. Cell research 34 (7) (2024)
Renrui Chen, Ziang Zhang, Junjie Ma, Bing Liu, Zhengyun Huang, Ganlu Hu, Ju Huang, Ying Xu, Guang-Zhong Wang
Circadian-driven tissue specificity is constrained under caloric restricted feeding conditions. Communications biology 7 (1) (2024)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Baoshi Yuan, Kexin Shi, Juanmin Zha, Yujia Cai, Yue Gu, Kai Huang, Wenchang Yue, Qiaocheng Zhai, Ning Ding, Wenyan Ren, Wei-Qi He, Ying Xu, Tao Wang
Nuclear receptor modulators inhibit osteosarcoma cell proliferation and tumour growth by regulating the mTOR signaling pathway. Cell death & disease 14 (1) (2023)
Baoshi Yuan, Kexin Shi, Juanmin Zha, Yujia Cai, Yue Gu, Kai Huang, Wenchang Yue, Qiaocheng Zhai, Ning Ding, Wenyan Ren, Wei-Qi He, Ying Xu, Tao Wang
Nuclear receptor modulators inhibit osteosarcoma cell proliferation and tumour growth by regulating the mTOR signaling pathway. Cell death & disease 14 (1) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Baoshi Yuan, Kexin Shi, Juanmin Zha, Yujia Cai, Yue Gu, Kai Huang, Wenchang Yue, Qiaocheng Zhai, Ning Ding, Wenyan Ren, Wei-Qi He, Ying Xu, Tao Wang
Nuclear receptor modulators inhibit osteosarcoma cell proliferation and tumour growth by regulating the mTOR signaling pathway. Cell death & disease 14 (1) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Baoshi Yuan, Kexin Shi, Juanmin Zha, Yujia Cai, Yue Gu, Kai Huang, Wenchang Yue, Qiaocheng Zhai, Ning Ding, Wenyan Ren, Wei-Qi He, Ying Xu, Tao Wang
Nuclear receptor modulators inhibit osteosarcoma cell proliferation and tumour growth by regulating the mTOR signaling pathway. Cell death & disease 14 (1) (2023)
Chaojun Tang, Guona Chen, Fan Wu, Yiren Cao, Fei Yang, Tao You, Chu Liu, Menglu Li, Shuhong Hu, Lijie Ren, Qiongyu Lu, Wei Deng, Ying Xu, Guixue Wang, Hanjoong Jo, Yonghong Zhang, Yi Wu, Brian A Zabel, Li Zhu
Endothelial CCRL2 induced by disturbed flow promotes atherosclerosis via chemerin-dependent β2 integrin activation in monocytes. Cardiovascular research (2023)
Pancheng Xie, Xiaowen Xie, Congrong Ye, Kevin M Dean, Isara Laothamatas, S K Tahajjul Taufique, Joseph S Takahashi, Shin Yamazaki, Ying Xu, Yi Liu
Mammalian circadian clock proteins form dynamic interacting microbodies distinct from phase separation. Proceedings of the National Academy of Sciences of the United States of America 120 (52) (2023)
Yang An, Baoshi Yuan, Pancheng Xie, Yue Gu, Zhiwei Liu, Tao Wang, Zhihao Li, Ying Xu, Yi Liu
Author Correction: Decoupling PER phosphorylation, stability and rhythmic expression from circadian clock function by abolishing PER-CK1 interaction. Nature communications 13 (1) (2022)
Yang An, Baoshi Yuan, Pancheng Xie, Yue Gu, Zhiwei Liu, Tao Wang, Zhihao Li, Ying Xu, Yi Liu
Decoupling PER phosphorylation, stability and rhythmic expression from circadian clock function by abolishing PER-CK1 interaction. Nature communications 13 (1) (2022)
Ran Gu, Shuwen Zhang, Subbroto Kumar Saha, Yu Ji, Kurt Reynolds, Moira McMahon, Bo Sun, Mohammad Islam, Paul A Trainor, YiPing Chen, Ying Xu, Yang Chai, Diana Burkart-Waco, Chengji J Zhou
Single-cell transcriptomic signatures and gene regulatory networks modulated by Wls in mammalian midline facial formation and clefts. Development (Cambridge, England) 149 (14) (2022)
Nadine Spielmann, Gregor Miller, Tudor I Oprea, Chih-Wei Hsu, Gisela Fobo, Goar Frishman, Corinna Montrone, Hamed Haseli Mashhadi, Jeremy C Mason, Violeta Munoz Fuentes, Stefanie Leuchtenberger, Andreas Ruepp, Matias Wagner, Dominik Sebastian Westphal, Cordula M Wolf, Agnes Görlach, Adrián Sanz-Moreno, Yi-Li Cho, Raffaele Teperino, Stefan Brandmaier, Sapna Sharma, Isabella Rikarda Galter, Manuela A Östereicher, Lilly Zapf, Philipp Mayer-Kuckuk, Jan Rozman, Lydia Teboul, Rosie K A Bunton-Stasyshyn, Heather L Cater, Michelle Stewart, Skevoulla Christou, Henrik Westerberg, Amelia M Willett, Janine M Wotton, Willson B Roper, Audrey E Christiansen, Christopher S Ward, Jason D Heaney, Corey L Reynolds, Jan Prochazka, Lynette Bower, Dave A Clary, Mohammed Selloum, Ghina Bou About, Olivia Wendling, Hugues Jacobs, Sophie Leblanc, Hamid Meziane, Tania Sorg, Enrique Audain, Arthur Gilly, Nigel William Rayner, null null, null null, Marc-Phillip Hitz, Eleftheria Zeggini, Eckhard Wolf, Radislav Sedlacek, Stephen A Murray, Karen L Svenson, Robert E Braun, Jaqueline K White, Lois Kelsey, Xiang Gao, Toshihiko Shiroishi, Ying Xu, Je-Kyung Seong, Fabio Mammano, Glauco P Tocchini-Valentini, Arthur L Beaudet, Terrence F Meehan, Helen Parkinson, Damian Smedley, Ann-Marie Mallon, Sara E Wells, Harald Grallert, Wolfgang Wurst, Susan Marschall, Helmut Fuchs, Steve D M Brown, Ann M Flenniken, Lauryl M J Nutter, Colin McKerlie, Yann Hérault, K C Kent Lloyd, Mary E Dickinson, Valérie Gailus-Durner, Martin Hrabě de Angelis
Extensive identification of genes involved in congenital and structural heart disorders and cardiomyopathy. Nature cardiovascular research 1 (2) (2022)
Chao Li, Yuming Feng, Zhenxin Fu, Junjie Deng, Yue Gu, Hanben Wang, Xin Wu, Zhengyun Huang, Yichen Zhu, Zhiwei Liu, Moli Huang, Tao Wang, Shijun Hu, Bing Yao, Yizhun Zeng, Chengji J Zhou, Steve D M Brown, Yi Liu, Antonio Vidal-Puig, Yingying Dong, Ying Xu
Human-specific gene CT47 blocks PRMT5 degradation to lead to meiosis arrest. Cell death discovery 8 (1) (2022)
Nadine Spielmann, Gregor Miller, Tudor I Oprea, Chih-Wei Hsu, Gisela Fobo, Goar Frishman, Corinna Montrone, Hamed Haseli Mashhadi, Jeremy C Mason, Violeta Munoz Fuentes, Stefanie Leuchtenberger, Andreas Ruepp, Matias Wagner, Dominik Sebastian Westphal, Cordula M Wolf, Agnes Görlach, Adrián Sanz-Moreno, Yi-Li Cho, Raffaele Teperino, Stefan Brandmaier, Sapna Sharma, Isabella Rikarda Galter, Manuela A Östereicher, Lilly Zapf, Philipp Mayer-Kuckuk, Jan Rozman, Lydia Teboul, Rosie K A Bunton-Stasyshyn, Heather L Cater, Michelle Stewart, Skevoulla Christou, Henrik Westerberg, Amelia M Willett, Janine M Wotton, Willson B Roper, Audrey E Christiansen, Christopher S Ward, Jason D Heaney, Corey L Reynolds, Jan Prochazka, Lynette Bower, Dave A Clary, Mohammed Selloum, Ghina Bou About, Olivia Wendling, Hugues Jacobs, Sophie Leblanc, Hamid Meziane, Tania Sorg, Enrique Audain, Arthur Gilly, Nigel William Rayner, null null, null null, Marc-Phillip Hitz, Eleftheria Zeggini, Eckhard Wolf, Radislav Sedlacek, Stephen A Murray, Karen L Svenson, Robert E Braun, Jaqueline K White, Lois Kelsey, Xiang Gao, Toshihiko Shiroishi, Ying Xu, Je-Kyung Seong, Fabio Mammano, Glauco P Tocchini-Valentini, Arthur L Beaudet, Terrence F Meehan, Helen Parkinson, Damian Smedley, Ann-Marie Mallon, Sara E Wells, Harald Grallert, Wolfgang Wurst, Susan Marschall, Helmut Fuchs, Steve D M Brown, Ann M Flenniken, Lauryl M J Nutter, Colin McKerlie, Yann Hérault, K C Kent Lloyd, Mary E Dickinson, Valérie Gailus-Durner, Martin Hrabě de Angelis
Extensive identification of genes involved in congenital and structural heart disorders and cardiomyopathy. Nature cardiovascular research 1 (2) (2022)
Nadine Spielmann, Gregor Miller, Tudor I Oprea, Chih-Wei Hsu, Gisela Fobo, Goar Frishman, Corinna Montrone, Hamed Haseli Mashhadi, Jeremy C Mason, Violeta Munoz Fuentes, Stefanie Leuchtenberger, Andreas Ruepp, Matias Wagner, Dominik Sebastian Westphal, Cordula M Wolf, Agnes Görlach, Adrián Sanz-Moreno, Yi-Li Cho, Raffaele Teperino, Stefan Brandmaier, Sapna Sharma, Isabella Rikarda Galter, Manuela A Östereicher, Lilly Zapf, Philipp Mayer-Kuckuk, Jan Rozman, Lydia Teboul, Rosie K A Bunton-Stasyshyn, Heather L Cater, Michelle Stewart, Skevoulla Christou, Henrik Westerberg, Amelia M Willett, Janine M Wotton, Willson B Roper, Audrey E Christiansen, Christopher S Ward, Jason D Heaney, Corey L Reynolds, Jan Prochazka, Lynette Bower, Dave A Clary, Mohammed Selloum, Ghina Bou About, Olivia Wendling, Hugues Jacobs, Sophie Leblanc, Hamid Meziane, Tania Sorg, Enrique Audain, Arthur Gilly, Nigel William Rayner, null null, null null, Marc-Phillip Hitz, Eleftheria Zeggini, Eckhard Wolf, Radislav Sedlacek, Stephen A Murray, Karen L Svenson, Robert E Braun, Jaqueline K White, Lois Kelsey, Xiang Gao, Toshihiko Shiroishi, Ying Xu, Je-Kyung Seong, Fabio Mammano, Glauco P Tocchini-Valentini, Arthur L Beaudet, Terrence F Meehan, Helen Parkinson, Damian Smedley, Ann-Marie Mallon, Sara E Wells, Harald Grallert, Wolfgang Wurst, Susan Marschall, Helmut Fuchs, Steve D M Brown, Ann M Flenniken, Lauryl M J Nutter, Colin McKerlie, Yann Hérault, K C Kent Lloyd, Mary E Dickinson, Valérie Gailus-Durner, Martin Hrabě de Angelis
Extensive identification of genes involved in congenital and structural heart disorders and cardiomyopathy. Nature cardiovascular research 1 (2) (2022)
Liang Xu, Ye Chen, Yulun Huang, Edwin Sandanaraj, John S Yu, Ruby Yu-Tong Lin, Pushkar Dakle, Xin-Yu Ke, Yuk Kien Chong, Lynnette Koh, Anand Mayakonda, Kassoum Nacro, Jeffrey Hill, Mo-Li Huang, Sigal Gery, See Wee Lim, Zhengyun Huang, Ying Xu, Jianxiang Chen, Longchuan Bai, Shaomeng Wang, Hiroaki Wakimoto, Tseng Tsai Yeo, Beng Ti Ang, Markus Müschen, Carol Tang, Tuan-Zea Tan, H Phillip Koeffler
Topography of transcriptionally active chromatin in glioblastoma. Science advances 7 (18) (2021)
Marie-Christine Birling, Atsushi Yoshiki, David J Adams, Shinya Ayabe, Arthur L Beaudet, Joanna Bottomley, Allan Bradley, Steve D M Brown, Antje Bürger, Wendy Bushell, Francesco Chiani, Hsian-Jean Genie Chin, Skevoulla Christou, Gemma F Codner, Francesco J DeMayo, Mary E Dickinson, Brendan Doe, Leah Rae Donahue, Martin D Fray, Alessia Gambadoro, Xiang Gao, Marina Gertsenstein, Alba Gomez-Segura, Leslie O Goodwin, Jason D Heaney, Yann Hérault, Martin Hrabě de Angelis, Si-Tse Jiang, Monica J Justice, Petr Kasparek, Ruairidh E King, Ralf Kühn, Ho Lee, Young-Jae Lee, Zhiwei Liu, Kevin C Kent Lloyd, Isabel Lorenzo, Ann-Marie Mallon, Colin McKerlie, Terrence F Meehan, Violeta Munoz Fuentes, Stuart Newman, Lauryl M J Nutter, Goo Taeg Oh, Guillaume Pavlovic, Ramiro Ramirez-Solis, Barry Rosen, Edward J Ryder, Luis A Santos, Joel A Schick, John R Seavitt, Radislav Sedlacek, Claudia Seisenberger, Je Kyung Seong, William C Skarnes, Tania Sorg, Karen P Steel, Masaru Tamura, Glauco P Tocchini-Valentini, Chi-Kuang Leo Wang, Hannah Wardle-Jones, Marie Wattenhofer-Donzé, Sara Wells, Michael V Wiles, Brandon J Willis, Joshua A Wood, Wolfgang Wurst, Ying Xu, null null, Lydia Teboul, Stephen A Murray
A resource of targeted mutant mouse lines for 5,061 genes. Nature genetics 53 (4) (2021)
Tao Zhang, Pancheng Xie, Yingying Dong, Zhiwei Liu, Fei Zhou, Dejing Pan, Zhengyun Huang, Qiaocheng Zhai, Yue Gu, Qingyu Wu, Nobuhiko Tanaka, Yuichi Obata, Allan Bradley, Christopher J Lelliott, null null, Lauryl M J Nutter, Colin McKerlie, Ann M Flenniken, Marie-France Champy, Tania Sorg, Yann Herault, Martin Hrabě de Angelis, Valerie Gailus Durner, Ann-Marie Mallon, Steve D M Brown, Terry Meehan, Helen E Parkinson, Damian Smedley, Kevin C Kent Lloyd, Jun Yan, Xiang Gao, Je Kyung Seong, Chi-Kuang Leo Wang, Radislav Sedlacek, Yi Liu, Jan Rozman, Ling Yang, Ying Xu
High-throughput discovery of genetic determinants of circadian misalignment. PLoS genetics 16 (1) (2020)
Can Wang, Zhiting Wang, Meiling He, Tiantian Zhou, Yayan Niu, Shengxuan Sun, Hui Li, Ce Zhang, Shengnan Zhang, Meng Liu, Ying Xu, Ningzheng Dong, Qingyu Wu
Krüppel-like factor 17 upregulates uterine corin expression and promotes spiral artery remodeling in pregnancy. Proceedings of the National Academy of Sciences of the United States of America 117 (32) (2020)
Philip Kurien, Pei-Ken Hsu, Jacy Leon, David Wu, Thomas McMahon, Guangsen Shi, Ying Xu, Anna Lipzen, Len A Pennacchio, Christopher R Jones, Ying-Hui Fu, Louis J Ptáček
TIMELESS mutation alters phase responsiveness and causes advanced sleep phase. Proceedings of the National Academy of Sciences of the United States of America 116 (24) (2019)
Liang Wang, Fei Zhou, Peng Zhang, Hongzhen Wang, Zhipeng Qu, Peng Jia, Zhe Yao, Guangsi Shen, Guangfei Li, Guoyang Zhao, Jian Li, Yongtao Mao, Zonggang Xie, Wei Xu, Youjia Xu, Ying Xu
Human type H vessels are a sensitive biomarker of bone mass. Cell death & disease 8 (5) (2017)
Zhipeng Qu, Hai Zhang, Moli Huang, Guangsen Shi, Zhiwei Liu, Pancheng Xie, Hui Li, Wei Wang, Guoqiang Xu, Yang Zhang, Ling Yang, Guocun Huang, Joseph S Takahashi, Weiping J Zhang, Ying Xu
Loss of ZBTB20 impairs circadian output and leads to unimodal behavioral rhythms. eLife 5 (2016)
Man Chu, Taotao Li, Bin Shen, Xudong Cao, Haoyu Zhong, Luqing Zhang, Fei Zhou, Wenjuan Ma, Haijuan Jiang, Pancheng Xie, Zhengzheng Liu, Ningzheng Dong, Ying Xu, Yun Zhao, Guoqiang Xu, Peirong Lu, Jincai Luo, Qingyu Wu, Kari Alitalo, Gou Young Koh, Ralf H Adams, Yulong He
Angiopoietin receptor Tie2 is required for vein specification and maintenance via regulating COUP-TFII. eLife 5 (2016)
Z Dong, M Huang, Z Liu, P Xie, Y Dong, X Wu, Z Qu, B Shen, X Huang, T Zhang, J Li, J Liu, T Yanase, C Zhou, Ying Xu
Focused screening of mitochondrial metabolism reveals a crucial role for a tumor suppressor Hbp1 in ovarian reserve. Cell death and differentiation 23 (10) (2016)
Arisa Hirano, Guangsen Shi, Christopher R Jones, Anna Lipzen, Len A Pennacchio, Ying Xu, William C Hallows, Thomas McMahon, Maya Yamazaki, Louis J Ptáček, Ying-Hui Fu
A Cryptochrome 2 mutation yields advanced sleep phase in humans. eLife 5 (2016)

Ying Xu.css-eqlu8i{font-size:small;padding-left:4px;} (Y Xu)

Publication Activity (10 Years)

Top Topics

Top Venues

Ying Xu (Y Xu)