Yosuke Nishimura

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 17

Top Topics

Network Analysis

Top Venues

Nature microbiology

The ISME journal

Environmental microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Shiozaki Takuhei, Yosuke Nishimura, Susumu Yoshizawa, Hideto Takami, Koji Hamasaki, Amane Fujiwara, Shigeto Nishino, Naomi Harada
Distribution and survival strategies of endemic and cosmopolitan diazotrophs in the Arctic Ocean. The ISME journal (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 8 (1) (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 8 (1) (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 8 (1) (2023)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Distinct groups of RNA viruses associated with thermoacidophilic bacteria. bioRxiv : the preprint server for biology (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 8 (1) (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems (2023)
Takuhei Shiozaki, Yosuke Nishimura, Susumu Yoshizawa, Hideto Takami, Koji Hamasaki, Amane Fujiwara, Shigeto Nishino, Naomi Harada
Correction: Distribution and survival strategies of endemic and cosmopolitan diazotrophs in the Arctic Ocean. The ISME journal (2023)
Kento Tominaga, Nana Ogawa-Haruki, Yosuke Nishimura, Hiroyasu Watai, Keigo Yamamoto, Hiroyuki Ogata, Takashi Yoshida
Prevalence of Viral Frequency-Dependent Infection in Coastal Marine Prokaryotes Revealed Using Monthly Time Series Virome Analysis. mSystems 8 (1) (2023)
Yosuke Nishimura, Susumu Yoshizawa
The OceanDNA MAG catalog contains over 50,000 prokaryotic genomes originated from various marine environments. Scientific data 9 (1) (2022)
Yusuke Okazaki, Yosuke Nishimura, Takashi Yoshida, Hiroyuki Ogata, Shin-Ichi Nakano
Genome-resolved viral and cellular metagenomes revealed potential key virus-host interactions in a deep freshwater lake. Environmental microbiology 21 (12) (2019)