Yoshihiro Takaki

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 18

Top Topics

Microbial Community

Top Venues

Nature microbiology

The ISME journal

Science advances

Science (New York, N.Y.)

This page only lists publications with an associated author ORCID identifier.

Publications

Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Double-stranded RNA sequencing reveals distinct riboviruses associated with thermoacidophilic bacteria from hot springs in Japan. Nature microbiology 9 (2) (2024)
Akihiro Tame, Tadashi Maruyama, Tetsuro Ikuta, Yoshihito Chikaraishi, Nanako O Ogawa, Masashi Tsuchiya, Kiyotaka Takishita, Miwako Tsuda, Miho Hirai, Yoshihiro Takaki, Naohiko Ohkouchi, Katsunori Fujikura, Takao Yoshida
mTORC1 regulates phagosome digestion of symbiotic bacteria for intracellular nutritional symbiosis in a deep-sea mussel. Science advances 9 (34) (2023)
Syun-Ichi Urayama, Akihito Fukudome, Miho Hirai, Tomoyo Okumura, Yosuke Nishimura, Yoshihiro Takaki, Norio Kurosawa, Eugene V Koonin, Mart Krupovic, Takuro Nunoura
Distinct groups of RNA viruses associated with thermoacidophilic bacteria. bioRxiv : the preprint server for biology (2023)
Yurika Ujiié, Yoshiyuki Ishitani, Yukiko Nagai, Yoshihiro Takaki, Takashi Toyofuku, Shun'ichi Ishii
Unique evolution of foraminiferal calcification to survive global changes. Science advances 9 (25) (2023)
Masahiro Yamamoto, Yoshihiro Takaki, Hiroyuki Kashima, Miwako Tsuda, Akiko Tanizaki, Ryuhei Nakamura, Ken Takai
In situ electrosynthetic bacterial growth using electricity generated by a deep-sea hydrothermal vent. The ISME journal (2022)
Yukari Yoshida-Takashima, Yoshihiro Takaki, Mitsuhiro Yoshida, Yi Zhang, Takuro Nunoura, Ken Takai
Genomic insights into phage-host interaction in the deep-sea chemolithoautotrophic Campylobacterota, Nitratiruptor. ISME communications 2 (1) (2022)
Tetsuro Ikuta, Yuka Amari, Akihiro Tame, Yoshihiro Takaki, Miwako Tsuda, Ryo Iizuka, Takashi Funatsu, Takao Yoshida
Inside or out? Clonal thiotrophic symbiont populations occupy deep-sea mussel bacteriocytes with pathways connecting to the external environment. ISME communications 1 (1) (2021)
Melina Kerou, Rafael I Ponce-Toledo, Rui Zhao, Sophie Saphia Abby, Miho Hirai, Hidetaka Nomaki, Yoshihiro Takaki, Takuro Nunoura, Steffen L Jørgensen, Christa Schleper
Genomes of Thaumarchaeota from deep sea sediments reveal specific adaptations of three independently evolved lineages. The ISME journal 15 (9) (2021)
Junichi Miyazaki, Tetsuro Ikuta, Tomo-O Watsuji, Mariko Abe, Masahiro Yamamoto, Satoshi Nakagawa, Yoshihiro Takaki, Kentaro Nakamura, Ken Takai
Dual energy metabolism of the Campylobacterota endosymbiont in the chemosynthetic snail Alviniconcha marisindica. The ISME journal 14 (5) (2020)
Jin Sun, Chong Chen, Norio Miyamoto, Runsheng Li, Julia D Sigwart, Ting Xu, Yanan Sun, Wai Chuen Wong, Jack Chi-Ho Ip, Weipeng Zhang, Yi Lan, Dass Bissessur, Tomo-O Watsuji, Hiromi Kayama Watanabe, Yoshihiro Takaki, Kazuho Ikeo, Nobuyuki Fujii, Kazutoshi Yoshitake, Jian-Wen Qiu, Ken Takai, Pei-Yuan Qian
The Scaly-foot Snail genome and implications for the origins of biomineralised armour. Nature communications 11 (1) (2020)
Hiroyuki Imachi, Eiji Tasumi, Yoshihiro Takaki, Tatsuhiko Hoshino, Florence Schubotz, Shuchai Gan, Tzu-Hsuan Tu, Yumi Saito, Yuko Yamanaka, Akira Ijiri, Yohei Matsui, Masayuki Miyazaki, Yuki Morono, Ken Takai, Kai-Uwe Hinrichs, Fumio Inagaki
Cultivable microbial community in 2-km-deep, 20-million-year-old subseafloor coalbeds through ~1000 days anaerobic bioreactor cultivation. Scientific reports 9 (1) (2019)
Maria G Pachiadaki, Eva Sintes, Kristin Bergauer, Julia M Brown, Nicholas R Record, Brandon K Swan, Mary Elizabeth Mathyer, Steven James Hallam, Purificacion Lopez-Garcia, Yoshihiro Takaki, Takuro Nunoura, Tanja Woyke, Gerhard J Herndl, Ramunas Stepanauskas
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation. Science (New York, N.Y.) 358 (6366) (2018)
Takuro Nunoura, Yoshito Chikaraishi, Rikihisa Izaki, Takashi Suwa, Takaaki Sato, Takeshi Harada, Koji Mori, Yumiko Kato, Masayuki Miyazaki, Shigeru Shimamura, Katsunori Yanagawa, Aya Shuto, Naohiko Ohkouchi, Nobuyuki Fujita, Yoshihiro Takaki, Haruyuki Atomi, Ken Takai
A primordial and reversible TCA cycle in a facultatively chemolithoautotrophic thermophile. Science (New York, N.Y.) 359 (6375) (2018)