Yu Chen

Publication Activity (10 Years)

Years Active: 2021-2023
Publications (10 Years): 8

Top Topics

Machine Learning

High Throughput

Top Venues

Nature communications

Cancer research

This page only lists publications with an associated author ORCID identifier.

Publications

Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Jun Wang, Holly R Thomas, Yu Chen, Stefanie M Percival, Stephanie C Waldrep, Ryne C Ramaker, Robert G Thompson, Sara J Cooper, Zechen Chong, John M Parant
Reduced sister chromatid cohesion acts as a tumor penetrance modifier. PLoS genetics 18 (8) (2022)
Yu Chen, Yiqing Wang, Weisheng Chen, Zhengzhi Tan, Yuwei Song, N/A Human Genome Structural Variation Consortium, Herbert Chen, Zechen Chong
Gene fusion detection and characterization in long-read cancer transcriptome sequencing data with FusionSeeker. Cancer research (2022)
Peter Ebert, Peter A Audano, Qihui Zhu, Bernardo Rodriguez-Martin, David Porubsky, Marc Jan Bonder, Arvis Sulovari, Jana Ebler, Weichen Zhou, Rebecca Serra Mari, Feyza Yilmaz, Xuefang Zhao, PingHsun Hsieh, Joyce Lee, Sushant Kumar, Jiadong Lin, Tobias Rausch, Yu Chen, Jingwen Ren, Martin Santamarina, Wolfram Höps, Hufsah Ashraf, Nelson T Chuang, Xiaofei Yang, Katherine M Munson, Alexandra P Lewis, Susan Fairley, Luke J Tallon, Wayne E Clarke, Anna O Basile, Marta Byrska-Bishop, André Corvelo, Uday S Evani, Tsung-Yu Lu, Mark J P Chaisson, Junjie Chen, Chong Li, Harrison Brand, Aaron M Wenger, Maryam Ghareghani, William T Harvey, Benjamin Raeder, Patrick Hasenfeld, Allison A Regier, Haley J Abel, Ira M Hall, Paul Flicek, Oliver Stegle, Mark B Gerstein, Jose M C Tubio, Zepeng Mu, Yang I Li, Xinghua Shi, Alex R Hastie, Kai Ye, Zechen Chong, Ashley D Sanders, Michael C Zody, Michael E Talkowski, Ryan E Mills, Scott E Devine, Charles Lee, Jan O Korbel, Tobias Marschall, Evan E Eichler
Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science (New York, N.Y.) 372 (6537) (2021)
Zhuo Zhang, Lin Luo, Chuan Xing, Yu Chen, Peng Xu, Mao Li, Ling Zeng, Chao Li, Sadashib Ghosh, Deborah Della Manna, Tim Townes, William J Britt, Narendra Wajapeyee, Barry P Sleckman, Zechen Chong, Jianmei Wu Leavenworth, Eddy Shih-Hsin Yang
RNF2 ablation reprograms the tumor-immune microenvironment and stimulates durable NK and CD4 + T-cell-dependent antitumor immunity. Nature cancer 2 (10) (2021)