Zechen Chong

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 17

Top Venues

Nature communications

Cancer research

Research square

NAR genomics and bioinformatics

University of Alabama at Birmingham

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Alabama at Birmingham

United States

Assistant Professor :: Genetics

Publications

Fengyuan Huang, Peng Xu, Zongliang Yue, Yuwei Song, Kaili Hu, Xinyang Zhao, Min Gao, Zechen Chong
Body Weight Correlates with Molecular Variances in Patients with Cancer. Cancer research 84 (5) (2024)
Zechen Chong, Fengyuan Huang, M McLeod, Regina Irwin, Mary Smithson, Zongliang Yue, Min Gao, Karin Hardiman
Molecular differentiation between complete and incomplete responders to neoadjuvant therapy in rectal cancer. Research square (2024)
Fengyuan Huang, Peng Xu, Zongliang Yue, Yuwei Song, Kaili Hu, Xinyang Zhao, Min Gao, Zechen Chong
Body Weight Correlates with Molecular Variances in Patients with Cancer. Cancer research 84 (5) (2024)
Zechen Chong, Fengyuan Huang, M McLeod, Regina Irwin, Mary Smithson, Zongliang Yue, Min Gao, Karin Hardiman
Molecular differentiation between complete and incomplete responders to neoadjuvant therapy in rectal cancer. Research square (2024)
Fengyuan Huang, Peng Xu, Zongliang Yue, Yuwei Song, Kaili Hu, Xinyang Zhao, Min Gao, Zechen Chong
Body Weight Correlates with Molecular Variances in Cancer Patients. Cancer research (2024)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Yu Chen, Amy Y Wang, Courtney A Barkley, Yixin Zhang, Xinyang Zhao, Min Gao, Mick D Edmonds, Zechen Chong
Deciphering the exact breakpoints of structural variations using long sequencing reads with DeBreak. Nature communications 14 (1) (2023)
Jun Wang, Holly R Thomas, Yu Chen, Stefanie M Percival, Stephanie C Waldrep, Ryne C Ramaker, Robert G Thompson, Sara J Cooper, Zechen Chong, John M Parant
Reduced sister chromatid cohesion acts as a tumor penetrance modifier. PLoS genetics 18 (8) (2022)
Yu Chen, Yiqing Wang, Weisheng Chen, Zhengzhi Tan, Yuwei Song, N/A Human Genome Structural Variation Consortium, Herbert Chen, Zechen Chong
Gene fusion detection and characterization in long-read cancer transcriptome sequencing data with FusionSeeker. Cancer research (2022)
Hongxing Shen, Fengyuan Huang, Xiangmin Zhang, Oluwagbemiga A Ojo, Yuebin Li, Hoa Quang Trummell, Joshua C Anderson, John Fiveash, Markus Bredel, Eddy Shih-Hsin Yang, Christopher D Willey, Zechen Chong, James A Bonner, Lewis Zhichang Shi
Selective suppression of melanoma lacking IFN-γ pathway by JAK inhibition depends on T cells and host TNF signaling. Nature communications 13 (1) (2022)
Fengyuan Huang, Li Xiao, Min Gao, Ethan J Vallely, Kevin Dybvig, T Prescott Atkinson, Ken B Waites, Zechen Chong
B-assembler: a circular bacterial genome assembler. BMC genomics 23 (Suppl 4) (2022)
Peter Ebert, Peter A Audano, Qihui Zhu, Bernardo Rodriguez-Martin, David Porubsky, Marc Jan Bonder, Arvis Sulovari, Jana Ebler, Weichen Zhou, Rebecca Serra Mari, Feyza Yilmaz, Xuefang Zhao, PingHsun Hsieh, Joyce Lee, Sushant Kumar, Jiadong Lin, Tobias Rausch, Yu Chen, Jingwen Ren, Martin Santamarina, Wolfram Höps, Hufsah Ashraf, Nelson T Chuang, Xiaofei Yang, Katherine M Munson, Alexandra P Lewis, Susan Fairley, Luke J Tallon, Wayne E Clarke, Anna O Basile, Marta Byrska-Bishop, André Corvelo, Uday S Evani, Tsung-Yu Lu, Mark J P Chaisson, Junjie Chen, Chong Li, Harrison Brand, Aaron M Wenger, Maryam Ghareghani, William T Harvey, Benjamin Raeder, Patrick Hasenfeld, Allison A Regier, Haley J Abel, Ira M Hall, Paul Flicek, Oliver Stegle, Mark B Gerstein, Jose M C Tubio, Zepeng Mu, Yang I Li, Xinghua Shi, Alex R Hastie, Kai Ye, Zechen Chong, Ashley D Sanders, Michael C Zody, Michael E Talkowski, Ryan E Mills, Scott E Devine, Charles Lee, Jan O Korbel, Tobias Marschall, Evan E Eichler
Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science (New York, N.Y.) 372 (6537) (2021)
Yu Chen, Yixin Zhang, Amy Y Wang, Min Gao, Zechen Chong
Accurate long-read de novo assembly evaluation with Inspector. Genome biology 22 (1) (2021)
Peng Xu, Yu Chen, Min Gao, Zechen Chong
ClipSV: improving structural variation detection by read extension, spliced alignment and tree-based decision rules. NAR genomics and bioinformatics 3 (1) (2021)
Mark J P Chaisson, Ashley D Sanders, Xuefang Zhao, Ankit Malhotra, David Porubsky, Tobias Rausch, Eugene J Gardner, Oscar L Rodriguez, Li Guo, Ryan L Collins, Xian Fan, Jia Wen, Robert E Handsaker, Susan Fairley, Zev N Kronenberg, Xiangmeng Kong, Fereydoun Hormozdiari, Dillon Lee, Aaron M Wenger, Alex R Hastie, Danny Antaki, Thomas Anantharaman, Peter A Audano, Harrison Brand, Stuart Cantsilieris, Han Cao, Eliza Cerveira, Chong Chen, Xintong Chen, Chen-Shan Chin, Zechen Chong, Nelson T Chuang, Christine C Lambert, Deanna M Church, Laura Clarke, Andrew Farrell, Joey Flores, Timur Galeev, David U Gorkin, Madhusudan Gujral, Victor Guryev, William Haynes Heaton, Jonas Korlach, Sushant Kumar, Jee Young Kwon, Ernest T Lam, Jong Eun Lee, Joyce Lee, Wan-Ping Lee, Sau Peng Lee, Shantao Li, Patrick Marks, Karine Viaud-Martinez, Sascha Meiers, Katherine M Munson, Fábio C P Navarro, Bradley J Nelson, Conor Nodzak, Amina Noor, Sofia Kyriazopoulou-Panagiotopoulou, Andy W C Pang, Yunjiang Qiu, Gabriel Rosanio, Mallory Ryan, Adrian Stütz, Diana C J Spierings, Alistair Ward, AnneMarie E Welch, Ming Xiao, Wei Xu, Chengsheng Zhang, Qihui Zhu, Xiangqun Zheng-Bradley, Ernesto Lowy-Gallego, Sergei Yakneen, Steven McCarroll, Goo Jun, Li Ding, Chong Lek Koh, Bing Ren, Paul Flicek, Ken Chen, Mark B Gerstein, Pui-Yan Kwok, Peter M Lansdorp, Gabor T Marth, Jonathan Sebat, Xing-Hua Shi, Ali Bashir, Kai Ye, Scott E Devine, Michael E Talkowski, Ryan E Mills, Tobias Marschall, Jan O Korbel, Evan E Eichler, Charles Lee
Multi-platform discovery of haplotype-resolved structural variation in human genomes. Nature communications 10 (1) (2019)

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Publication Activity (10 Years)

Top Topics

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Zechen Chong