Yunxi Liu

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 19

Top Topics

Machine Learning

Respiratory Syndrome Coronavirus

Top Venues

bioRxiv : the preprint server for biology

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read sequenced metagenomes with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens. Nature communications 15 (1) (2024)
Yunxi Liu, Nicolae Sapoval, Pilar Gallego-García, Laura Tomás, David Posada, Todd J Treangen, Lauren B Stadler
Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater. Nature communications 15 (1) (2024)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens. Nature communications 15 (1) (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read sequenced metagenomes with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens. Nature communications 15 (1) (2024)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: towards automated variant aware primer design for multiplex tiled amplicon sequencing of pathogens. Nature communications 15 (1) (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read sequenced metagenomes with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Yunxi Liu, Nicolae Sapoval, Pilar Gallego-García, Laura Tomás, David Posada, Todd J Treangen, Lauren B Stadler
Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater. Nature communications 15 (1) (2024)
Yunxi Liu, Nicolae Sapoval, Pilar Gallego-García, Laura Tomás, David Posada, Todd J Treangen, Lauren B Stadler
Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater. Nature communications 15 (1) (2024)
Nicolae Sapoval, Yunxi Liu, Kristen D Curry, Bryce Kille, Wenyu Huang, Natalie Kokroko, Michael G Nute, Alona Tyshaieva, Alexander T Dilthey, Erin K Molloy, Todd J Treangen
Lightweight taxonomic profiling of long-read metagenomic datasets with Lemur and Magnet. bioRxiv : the preprint server for biology (2024)
Yunxi Liu, Nicolae Sapoval, Pilar Gallego-García, Laura Tomás, David Posada, Todd J Treangen, Lauren B Stadler
Crykey: Rapid identification of SARS-CoV-2 cryptic mutations in wastewater. Nature communications 15 (1) (2024)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes. bioRxiv : the preprint server for biology (2023)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes. bioRxiv : the preprint server for biology (2023)
Michael Xiangjiang Wang, Esther G Lou, Nicolae Sapoval, Eddie Kim, Prashant Bharadwaj Kalvapalle, Bryce Kille, R A Leo Elworth, Yunxi Liu, Yilei Fu, Lauren B Stadler, Todd J Treangen
Olivar: fully automated and variant aware primer design for multiplex tiled amplicon sequencing of pathogen genomes. bioRxiv : the preprint server for biology (2023)
Yunxi Liu, Joshua Kearney, Medhat Mahmoud, Bryce Kille, Fritz J Sedlazeck, Todd J Treangen
Rescuing Low Frequency Variants within Intra-Host Viral Populations directly from Oxford Nanopore sequencing data. bioRxiv : the preprint server for biology (2021)