Zhengqing Ouyang

Loop profile ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 19

Top Topics

Gene Expression

Endoscopic Submucosal Dissection

Binding Protein

Respiratory Syncytial Virus

Top Venues

Nature biotechnology

BMC bioinformatics

NAR genomics and bioinformatics

Statistical applications in genetics and molecular biology

This page only lists publications with an associated author ORCID identifier.

Publications

Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Henry Linder, Yuping Zhang, Yunqi Wang, Zhengqing Ouyang
Integrative pathway analysis with gene expression, miRNA, methylation and copy number variation for breast cancer subtypes. Statistical applications in genetics and molecular biology 23 (1) (2024)
Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Tong Wu, Anthony Youzhi Cheng, Yuexiu Zhang, Jiayu Xu, Jinjun Wu, Li Wen, Xiao Li, Bei Liu, Xiaoyang Dou, Pingluan Wang, Linda Zhang, Taekjip Ha, Jianrong Li, Zhengqing Ouyang, Chuan He
KARR-seq reveals cellular higher-order RNA structures and RNA-RNA interactions. Nature biotechnology (2024)
Henry Linder, Yuping Zhang, Yunqi Wang, Zhengqing Ouyang
Integrative pathway analysis with gene expression, miRNA, methylation and copy number variation for breast cancer subtypes. Statistical applications in genetics and molecular biology 23 (1) (2024)
Anthony Cheng, Disheng Mao, Yuping Zhang, Joseph Glaz, Zhengqing Ouyang
Translocation detection from Hi-C data via scan statistics. Biometrics (2022)
Jianan Lin, Yang Chen, Yuping Zhang, Haifan Lin, Zhengqing Ouyang
Deciphering the role of RNA structure in translation efficiency. BMC bioinformatics 23 (Suppl 3) (2022)
Jianan Lin, Yang Chen, Yuping Zhang, Haifan Lin, Zhengqing Ouyang
Deciphering the role of RNA structure in translation efficiency. BMC bioinformatics 23 (Suppl 3) (2022)
Jianan Lin, Yang Chen, Yuping Zhang, Haifan Lin, Zhengqing Ouyang
Deciphering the role of RNA structure in translation efficiency. BMC bioinformatics 23 (Suppl 3) (2022)
Hao Wu, Disheng Mao, Yuping Zhang, Zhiyi Chi, Michael Stitzel, Zhengqing Ouyang
A new graph-based clustering method with application to single-cell RNA-seq data from human pancreatic islets. NAR genomics and bioinformatics 3 (1) (2021)
Kamini Singh, Jianan Lin, Nicolas Lecomte, Prathibha Mohan, Askan Gokce, Viraj R Sanghvi, Man Jiang, Olivera Grbovic-Huezo, Antonija Burčul, Stefan G Stark, Paul B Romesser, Qing Chang, Jerry P Melchor, Rachel K Beyer, Mark Duggan, Yoshiyuki Fukase, Guangli Yang, Ouathek Ouerfelli, Agnes Viale, Elisa de Stanchina, Andrew W Stamford, Peter T Meinke, Gunnar Rätsch, Steven D Leach, Zhengqing Ouyang, Hans-Guido Wendel
Targeting eIF4A-Dependent Translation of KRAS Signaling Molecules. Cancer research 81 (8) (2021)
Alberto Herrera, Anthony Cheng, Eleni P Mimitou, Angelina Seffens, Dean George, Michal Bar-Natan, Adriana Heguy, Kelly V Ruggles, Jose U Scher, Kenneth Hymes, Jo-Ann Latkowski, Niels Odum, Marshall E Kadin, Zhengqing Ouyang, Larisa J Geskin, Peter Smibert, Terkild Brink Buus, Sergei B Koralov
Multimodal single-cell analysis of cutaneous T-cell lymphoma reveals distinct subclonal tissue-dependent signatures. Blood 138 (16) (2021)
Jovan Tanevski, Thin Nguyen, Buu Truong, Nikos Karaiskos, Mehmet Eren Ahsen, Xinyu Zhang, Chang Shu, Ke Xu, Xiaoyu Liang, Ying Hu, Hoang Vv Pham, Li Xiaomei, Thuc Duy Le, Adi Laurentiu Tarca, Gaurav Bhatti, Roberto Romero, Nestoras Karathanasis, Phillipe Loher, Yang Chen, Zhengqing Ouyang, Disheng Mao, Yuping Zhang, Maryam Zand, Jianhua Ruan, Christoph Hafemeister, Peng Qiu, Duc Tran, Tin Nguyen, Attila Gabor, Thomas Yu, Justin Guinney, Enrico Glaab, Roland Krause, Peter Banda, null null, Gustavo Stolovitzky, Nikolaus Rajewsky, Julio Saez-Rodriguez, Pablo Meyer
Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data. Life science alliance 3 (11) (2020)
Jianan Lin, Yang Chen, Yuping Zhang, Zhengqing Ouyang
Identification and analysis of RNA structural disruptions induced by single nucleotide variants using Riprap and RiboSNitchDB. NAR genomics and bioinformatics 2 (3) (2020)
Qiancheng You, Anthony Youzhi Cheng, Xi Gu, Bryan T Harada, Miao Yu, Tong Wu, Bing Ren, Zhengqing Ouyang, Chuan He
Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution. Nature biotechnology 39 (2) (2020)
Jianan Lin, Yuping Zhang, Wayne N Frankel, Zhengqing Ouyang
PRAS: Predicting functional targets of RNA binding proteins based on CLIP-seq peaks. PLoS computational biology 15 (8) (2019)