Auto-MuRCiS: a streamlined software package for analysis of multiplex, randomized CRISPR interference sequencing data.
Kevin S MyersMichael PlaceAudrey P GaschDaniel R NogueraTimothy J DonohuePublished in: Microbiology resource announcements (2024)
Multiplex, randomized CRISPR interference sequencing (MuRCiS) allows for the simultaneous identification of multiple gene knockouts that together influence microbial processes. Here, we report on an updated analysis tool called Auto-MuRCiS that utilizes Docker to make the analysis of these data rapid and more user-friendly.
Keyphrases
- genome wide
- double blind
- open label
- genome editing
- crispr cas
- placebo controlled
- electronic health record
- phase iii
- single cell
- high throughput
- phase ii
- big data
- data analysis
- real time pcr
- clinical trial
- dna methylation
- copy number
- microbial community
- gene expression
- randomized controlled trial
- machine learning
- bioinformatics analysis