Daniel R Noguera

ORCID

Publication Activity (10 Years)

Years Active: 2018-2024
Publications (10 Years): 34

Top Venues

Microbiology resource announcements

Applied and environmental microbiology

mSystems

mBio

University of Wisconsin Madison

University of Illinois at Urbana-Champaign (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

University of Wisconsin Madison

United States

Professor :: Department of Civil and Environmental Engineering

University of Wisconsin Madison

United States

Associate Professor :: Department of Civil and Environmental Engineering

University of Wisconsin Madison

United States

Assistant Professor :: Department of Civil and Environmental Engineering,

Northwestern University

United States

Postdoctoral Research Associate :: Department of Civil and Environmental Engineering

University of Illinois at Urbana-Champaign

United States

Graduate Research Assistant :: Department of Civil and Environmental Engineering

Universidad de los Andes

Colombia

Graduate Research Assistant :: Department of Civil Engineering

Education History

University of Illinois at Urbana-Champaign

United States

PHD :: Department of Civil and Environmental Engineering

University of Illinois at Urbana-Champaign

United States

MSC :: Department of Civil and Environmental Engineering

Universidad de los Andes

Colombia

MSC :: Civil Engineering

Universidad de los Andes

Colombia

BSC :: Civil Engineering

Publications

Kevin A Walters, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Metagenome-assembled genomes from microbiomes fermenting dairy coproducts. Microbiology resource announcements 13 (7) (2024)
Rachel D Stewart, Kevin S Myers, Carly Amstadt, Matt Seib, Katherine D McMahon, Daniel R Noguera
Refinement of the " Candidatus Accumulibacter" genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration. mSystems 9 (3) (2024)
Kevin A Walters, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Metagenome-assembled genomes from microbiomes fermenting dairy coproducts. Microbiology resource announcements (2024)
Kevin S Myers, Michael Place, Audrey P Gasch, Daniel R Noguera, Timothy J Donohue
Auto-MuRCiS: a streamlined software package for analysis of multiplex, randomized CRISPR interference sequencing data. Microbiology resource announcements (2024)
Kevin A Walters, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Metagenome-assembled genomes from microbiomes fermenting dairy coproducts. Microbiology resource announcements 13 (7) (2024)
Kevin A Walters, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Metagenome-assembled genomes from microbiomes fermenting dairy coproducts. Microbiology resource announcements 13 (7) (2024)
Rachel D Stewart, Kevin S Myers, Carly Amstadt, Matt Seib, Katherine D McMahon, Daniel R Noguera
Refinement of the " Candidatus Accumulibacter" genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration. mSystems 9 (3) (2024)
Rachel D Stewart, Kevin S Myers, Carly Amstadt, Matt Seib, Katherine D McMahon, Daniel R Noguera
Refinement of the " Candidatus Accumulibacter" genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration. mSystems (2024)
Rachel D Stewart, Kevin S Myers, Carly Amstadt, Matt Seib, Katherine D McMahon, Daniel R Noguera
Refinement of the " Candidatus Accumulibacter" genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration. mSystems 9 (3) (2024)
Avery C Vilbert, Wayne S Kontur, Derek Gille, Daniel R Noguera, Timothy J Donohue
Engineering Novosphingobium aromaticivorans to produce cis,cis -muconic acid from biomass aromatics. Applied and environmental microbiology 90 (1) (2023)
Avery C Vilbert, Wayne S Kontur, Derek Gille, Daniel R Noguera, Timothy J Donohue
Engineering Novosphingobium aromaticivorans to produce cis,cis -muconic acid from biomass aromatics. Applied and environmental microbiology 90 (1) (2023)
Avery C Vilbert, Wayne S Kontur, Derek Gille, Daniel R Noguera, Timothy J Donohue
Engineering Novosphingobium aromaticivorans to produce cis,cis -muconic acid from biomass aromatics. Applied and environmental microbiology (2023)
Bryan D Lakey, François Alberge, Daniel Parrell, Elizabeth R Wright, Daniel R Noguera, Timothy J Donohue
The role of CenKR in the coordination of Rhodobacter sphaeroides cell elongation and division. mBio (2023)
Avery C Vilbert, Wayne S Kontur, Derek Gille, Daniel R Noguera, Timothy J Donohue
Engineering Novosphingobium aromaticivorans to produce cis,cis -muconic acid from biomass aromatics. Applied and environmental microbiology 90 (1) (2023)
Benjamin W Hall, Wayne S Kontur, Jeanette C Neri, Derek M Gille, Daniel R Noguera, Timothy J Donohue
Production of carotenoids from aromatics and pretreated lignocellulosic biomass by Novosphingobium aromaticivorans . Applied and environmental microbiology (2023)
Avery C Vilbert, Wayne S Kontur, Derek Gille, Daniel R Noguera, Timothy J Donohue
Engineering Novosphingobium aromaticivorans to produce cis,cis -muconic acid from biomass aromatics. Applied and environmental microbiology 90 (1) (2023)
Nathaniel W Fortney, Kevin S Myers, Abel T Ingle, Kevin A Walters, Matthew J Scarborough, Timothy J Donohue, Daniel R Noguera
Metagenomes and Metagenome-Assembled Genomes from Microbiomes Metabolizing Thin Stillage from an Ethanol Biorefinery. Microbiology resource announcements 11 (8) (2022)
Alexandra M Linz, Yanjun Ma, Samuel Scholz, Daniel R Noguera, Timothy J Donohue
iNovo479: Metabolic Modeling Provides a Roadmap to Optimize Bioproduct Yield from Deconstructed Lignin Aromatics by Novosphingobium aromaticivorans . Metabolites 12 (4) (2022)
Abel T Ingle, Nathaniel W Fortney, Kevin S Myers, Kevin A Walters, Matthew J Scarborough, Timothy J Donohue, Daniel R Noguera
Metagenome-Assembled Genomes from a Microbiome Grown in Dairy Manure Hydrolysate. Microbiology resource announcements 11 (8) (2022)
Kevin A Walters, Kevin S Myers, Hui Wang, Nathaniel W Fortney, Abel T Ingle, Matthew J Scarborough, Timothy J Donohue, Daniel R Noguera
Metagenomes and Metagenome-Assembled Genomes from Microbial Communities Fermenting Ultrafiltered Milk Permeate. Microbiology resource announcements 11 (7) (2022)
Bryan D Lakey, Kevin S Myers, François Alberge, Erin L Mettert, Patricia J Kiley, Daniel R Noguera, Timothy J Donohue
The essential Rhodobacter sphaeroides CenKR two-component system regulates cell division and envelope biosynthesis. PLoS genetics 18 (6) (2022)
Natalie K Beach, Kevin S Myers, Brian R Owen, Matt Seib, Timothy J Donohue, Daniel R Noguera
Correction for Beach et al., "Exploring the Meta-regulon of the CRP/FNR Family of Global Transcriptional Regulators in a Partial-Nitritation Anammox Microbiome". mSystems 7 (3) (2022)
Natalie K Beach, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Metagenomes from 25 Low-Abundance Microbes in a Partial Nitritation Anammox Microbiome. Microbiology resource announcements 11 (6) (2022)
Natalie K Beach, Kevin S Myers, Brian R Owen, Matt Seib, Timothy J Donohue, Daniel R Noguera
Exploring the Meta-regulon of the CRP/FNR Family of Global Transcriptional Regulators in a Partial-Nitritation Anammox Microbiome. mSystems 6 (5) (2021)
Jose M Perez, Wayne S Kontur, Carson Gehl, Derek M Gille, Yanjun Ma, Alyssa V Niles, German Umana, Timothy J Donohue, Daniel R Noguera
Redundancy in aromatic O-demethylation and ring opening reactions in Novosphingobium aromaticivorans and their impact in the metabolism of plant derived phenolics. Applied and environmental microbiology (2021)
Yanjun Ma, Timothy J Donohue, Daniel R Noguera
Kinetic modeling of anaerobic degradation of plant-derived aromatic mixtures by Rhodopseudomonas palustris. Biodegradation 32 (2) (2021)
J Zachary Oshlag, Yanjun Ma, Kaitlin Morse, Brian T Burger, Rachelle A Lemke, Steven D Karlen, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Anaerobic Degradation of Syringic Acid by an Adapted Strain of Rhodopseudomonas palustris. Applied and environmental microbiology 86 (3) (2020)
Matthew J Scarborough, Joshua J Hamilton, Elizabeth A Erb, Timothy J Donohue, Daniel R Noguera
Diagnosing and Predicting Mixed-Culture Fermentations with Unicellular and Guild-Based Metabolic Models. mSystems 5 (5) (2020)
Kevin S Myers, Michael Place, Daniel R Noguera, Timothy J Donohue
COnTORT: COmprehensive Transcriptomic ORganizational Tool for Simultaneously Retrieving and Organizing Numerous Gene Expression Data Sets from the NCBI Gene Expression Omnibus Database. Microbiology resource announcements 9 (25) (2020)
Christopher E Lawson, Guylaine H L Nuijten, Rob M de Graaf, Tyler B Jacobson, Martin Pabst, David M Stevenson, Mike S M Jetten, Daniel R Noguera, Katherine D McMahon, Daniel Amador-Noguez, Sebastian Lücker
Autotrophic and mixotrophic metabolism of an anammox bacterium revealed by in vivo 13C and 2H metabolic network mapping. The ISME journal 15 (3) (2020)
Matthew J Scarborough, Kevin S Myers, Timothy J Donohue, Daniel R Noguera
Medium-Chain Fatty Acid Synthesis by "Candidatus Weimeria bifida" gen. nov., sp. nov., and "Candidatus Pseudoramibacter fermentans" sp. nov. Applied and environmental microbiology 86 (3) (2020)
Pamela Y Camejo, Ben O Oyserman, Katherine D McMahon, Daniel R Noguera
Integrated Omic Analyses Provide Evidence that a "Candidatus Accumulibacter phosphatis" Strain Performs Denitrification under Microaerobic Conditions. mSystems 4 (1) (2019)
Matthew J Scarborough, Christopher E Lawson, Joshua J Hamilton, Timothy J Donohue, Daniel R Noguera
Metatranscriptomic and Thermodynamic Insights into Medium-Chain Fatty Acid Production Using an Anaerobic Microbiome. mSystems 3 (6) (2018)
Daniel L Gall, Wayne S Kontur, Wu Lan, Hoon Kim, Yanding Li, John Ralph, Timothy J Donohue, Daniel R Noguera
In Vitro Enzymatic Depolymerization of Lignin with Release of Syringyl, Guaiacyl, and Tricin Units. Applied and environmental microbiology 84 (3) (2018)

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Publication Activity (10 Years)

Top Topics

Top Venues

Daniel R Noguera