A Ercument Cicek (A Ercüment Çiçek, Ercument Cicek)

ORCID

Publication Activity (10 Years)

Years Active: 2019-2024
Publications (10 Years): 10

Top Venues

Nature communications

Bioinformatics (Oxford, England)

Genome research

PLoS computational biology

Bilkent Üniversitesi

Case Western Reserve University (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Bilkent Üniversitesi Sep 01 2015

Turkey

Assistant Professor :: Computer Engineering

Carnegie Mellon University Sep 01 2015

United States

Adjunct Faculty Member :: Computational Biology Department

Carnegie Mellon University Aug 01 2013 - Aug 01 2015

United States

Lane Fellow in Computational Biology :: Computational Biology Department

Education History

Case Western Reserve University Sep 01 2009 - Aug 16 2013

United States

PHD :: Computer Science

Sabanci Universitesi Sep 01 2007 - Jul 01 2009

Turkey

MSC :: Computer Science and Engineering

Sabanci Universitesi Sep 01 2003 - Jul 01 2007

Turkey

BSC :: Computer Science and Engineering

Publications

Berk Mandiracioglu, Furkan Ozden, Gun Kaynar, Mehmet Alper Yilmaz, Can Alkan, A Ercument Cicek
ECOLE: Learning to call copy number variants on whole exome sequencing data. Nature communications 15 (1) (2024)
Berk Mandiracioglu, Furkan Ozden, Gun Kaynar, Mehmet Alper Yilmaz, Can Alkan, A Ercument Cicek
ECOLE: Learning to call copy number variants on whole exome sequencing data. Nature communications 15 (1) (2024)
Berk Mandiracioglu, Furkan Ozden, Gun Kaynar, Mehmet Alper Yilmaz, Can Alkan, A Ercument Cicek
ECOLE: Learning to call copy number variants on whole exome sequencing data. Nature communications 15 (1) (2024)
Berk Mandiracioglu, Furkan Ozden, Gun Kaynar, Mehmet Alper Yilmaz, Can Alkan, A Ercument Cicek
ECOLE: Learning to call copy number variants on whole exome sequencing data. Nature communications 15 (1) (2024)
Oya Karaşan, Alper Şen, Banu Tiryaki, A Ercument Cicek
A unifying network modeling approach for codon optimization. Bioinformatics (Oxford, England) 38 (16) (2022)
Furkan Özden, Can Alkan, A Ercument Cicek
Polishing copy number variant calls on exome sequencing data via deep learning. Genome research 32 (6) (2022)
Doruk Cakmakci, Gun Kaynar, Caroline Bund, Martial Piotto, Francois Proust, Izzie Jacques Namer, A Ercument Cicek
Targeted metabolomics analyses for brain tumor margin assessment during surgery. Bioinformatics (Oxford, England) 38 (12) (2022)
Siwei Chen, Jiebiao Wang, A Ercument Cicek, Kathryn Roeder, Haiyuan Yu, Bernie Devlin
De novo missense variants disrupting protein-protein interactions affect risk for autism through gene co-expression and protein networks in neuronal cell types. Molecular autism 11 (1) (2020)
Doruk Cakmakci, Emin Onur Karakaslar, Elisa Ruhland, Marie-Pierre Chenard, Francois Proust, Martial Piotto, Izzie Jacques Namer, A Ercument Cicek
Machine learning assisted intraoperative assessment of brain tumor margins using HRMAS NMR spectroscopy. PLoS computational biology 16 (11) (2020)
Siming Zhao, Jun Liu, Pranav Nanga, Yuwen Liu, A Ercument Cicek, Nicholas Knoblauch, Chuan He, Matthew Stephens, Xin He
Detailed modeling of positive selection improves detection of cancer driver genes. Nature communications 10 (1) (2019)

A Ercument Cicek.css-eqlu8i{font-size:small;padding-left:4px;} (A Ercüment Çiçek, Ercument Cicek)

Publication Activity (10 Years)

Top Topics

Top Venues

A Ercument Cicek (A Ercüment Çiçek, Ercument Cicek)