Jozef Adam Liwo (A Liwo, Adam Liwo)

Scopus Author ID ORCID

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 37

Top Venues

Journal of chemical information and modeling

The journal of physical chemistry. B

Journal of computational chemistry

Biomolecules

Korea Institute for Advanced Study

University of Gdańsk (PHD)

This page only lists publications with an associated author ORCID identifier.

Affiliation History

Korea Institute for Advanced Study Dec 15 2014

South Korea

KIAS Scholar :: Compuational Sciences

University of Gdańsk Jan 01 2004

Poland

Professor :: Chemistry

Cornell University Jan 11 2003 - Aug 10 2010

United States

Senior Research Associate :: Chemistry and Chemical Biology

University of Gdańsk Jan 01 2000 - Dec 31 2003

Poland

Associate Professor :: Chemistry

Gdańsk University of Technology Oct 01 2001 - Oct 31 2003

Poland

Vice Director for Scientific Affairs :: Informatics Center TASK

University of Gdańsk Oct 10 1989 - Dec 31 2000

Poland

Assistant Professor :: Chemistry

Cornell University Oct 01 1990 - Sep 29 1992

United States

Postdoctoral Associate :: Chemistry and Chemical Biology

University of Gdańsk Oct 01 1983 - Sep 30 1989

Poland

Teaching Assistant :: Mathematics, Physics, and Chemistry

Education History

University of Gdańsk Oct 01 1983 - Jun 19 1989

Poland

PHD :: Mathematics, Physics, and Chemistry

University of Gdańsk Oct 01 1979 - Jun 26 1983

Poland

MSC :: Matematics, Physics, and Chemistry

Publications

Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling 64 (4) (2024)
Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling 64 (4) (2024)
Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling 64 (4) (2024)
Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling 64 (4) (2024)
Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling (2024)
Mateusz Leśniewski, Maciej Pyrka, Cezary Czaplewski, Nguyen Truong Co, Yida Jiang, Zhou Gong, Chun Tang, Jozef Adam Liwo
Assessment of Two Restraint Potentials for Coarse-Grained Chemical-Cross-Link-Assisted Modeling of Protein Structures. Journal of chemical information and modeling 64 (4) (2024)
Ł J Dziadek, Adam K Sieradzan, Cezary Czaplewski, M Zalewski, F Banaś, M Toczek, W Nisterenko, S Grudinin, Jozef Adam Liwo, Artur Giełdoń
Assessment of Four Theoretical Approaches to Predict Protein Flexibility in the Crystal Phase and Solution. Journal of chemical theory and computation (2024)
Jozef Adam Liwo, Maciej Pyrka, Cezary Czaplewski, Xubiao Peng, Antti J Niemi
Long-Time Dynamics of Selected Molecular-Motor Components Using a Physics-Based Coarse-Grained Approach. Biomolecules 13 (6) (2023)
Annemarie Danielsson, Sergey A Samsonov, Jozef Adam Liwo, Adam K Sieradzan
Extension of the SUGRES-1P Coarse-Grained Model of Polysaccharides to Heparin. Journal of chemical theory and computation (2023)
Agnieszka G Lipska, Adam K Sieradzan, Cezary Czaplewski, Andrea D Lipińska, Krzysztof M Ocetkiewicz, Jerzy Proficz, Paweł Czarnul, Henryk Krawczyk, Jozef Adam Liwo
Long-time scale simulations of virus-like particles from three human-norovirus strains. Journal of computational chemistry (2023)
Jozef Adam Liwo, Maciej Pyrka, Cezary Czaplewski, Xubiao Peng, Antti J Niemi
Long-Time Dynamics of Selected Molecular-Motor Components Using a Physics-Based Coarse-Grained Approach. Biomolecules 13 (6) (2023)
Christian Schulze, Annemarie Danielsson, Jozef Adam Liwo, Daniel Huster, Sergey A Samsonov, Anja Penk
Ligand binding of interleukin-8: a comparison of glycosaminoglycans and acidic peptides. Physical chemistry chemical physics : PCCP (2023)
Luís Borges-Araújo, Ilias Patmanidis, Akhil P Singh, Lucianna H S Santos, Adam K Sieradzan, Stefano Vanni, Cezary Czaplewski, Sergio Pantano, Wataru Shinoda, Luca Monticelli, Jozef Adam Liwo, Siewert-Jan Marrink, Paulo Cesar Telles de Souza
Pragmatic Coarse-Graining of Proteins: Models and Applications. Journal of chemical theory and computation (2023)
Agnieszka G Lipska, Adam K Sieradzan, Sümeyye Atmaca, Cezary Czaplewski, Jozef Adam Liwo
Toward Consistent Physics-Based Modeling of Local Backbone Structures and Chirality Change of Proteins in Coarse-Grained Approaches. The journal of physical chemistry letters (2023)
Jozef Adam Liwo, Maciej Pyrka, Cezary Czaplewski, Xubiao Peng, Antti J Niemi
Long-Time Dynamics of Selected Molecular-Motor Components Using a Physics-Based Coarse-Grained Approach. Biomolecules 13 (6) (2023)
Iga Biskupek, Adam K Sieradzan, Cezary Czaplewski, Jozef Adam Liwo, Adam Lesner, Artur Giełdoń
Theoretical Investigation of the Coronavirus SARS-CoV-2 (COVID-19) Infection Mechanism and Selectivity. Molecules (Basel, Switzerland) 27 (7) (2022)
Celina Sikorska, Jozef Adam Liwo
Correction to "Origin of Correlations between Local Conformational States of Consecutive Amino-Acid Residues and Their Role in Shaping Protein Structures and in Allostery". The journal of physical chemistry. B (2022)
Celina Sikorska, Jozef Adam Liwo
Origin of Correlations between Local Conformational States of Consecutive Amino Acid Residues and Their Role in Shaping Protein Structures and in Allostery. The journal of physical chemistry. B 126 (46) (2022)
Iga Biskupek, Cezary Czaplewski, Justyna Sawicka, Emilia Iłowska, Milena Deptuła, Sylwia Rodziewicz-Motowidło, Jozef Adam Liwo
Prediction of Aggregation of Biologically-Active Peptides with the UNRES Coarse-Grained Model. Biomolecules 12 (8) (2022)
Celina Sikorska, Jozef Adam Liwo
Correction to "Origin of Correlations between Local Conformational States of Consecutive Amino-Acid Residues and Their Role in Shaping Protein Structures and in Allostery". The journal of physical chemistry. B (2022)
Celina Sikorska, Jozef Adam Liwo
Correction to "Origin of Correlations between Local Conformational States of Consecutive Amino-Acid Residues and Their Role in Shaping Protein Structures and in Allostery". The journal of physical chemistry. B 127 (1) (2022)
Celina Sikorska, Jozef Adam Liwo
Correction to "Origin of Correlations between Local Conformational States of Consecutive Amino-Acid Residues and Their Role in Shaping Protein Structures and in Allostery". The journal of physical chemistry. B 127 (1) (2022)
Adam K Sieradzan, Jordi Sans-Duñó, Emilia A Lubecka, Cezary Czaplewski, Agnieszka G Lipska, Henryk Leszczyński, Krzysztof M Ocetkiewicz, Jerzy Proficz, Paweł Czarnul, Henryk Krawczyk, Jozef Adam Liwo
Optimization of parallel implementation of UNRES package for coarse-grained simulations to treat large proteins. Journal of computational chemistry (2022)
Jozef Adam Liwo, Cezary Czaplewski, Adam K Sieradzan, Agnieszka G Lipska, Sergey A Samsonov, Rajesh K Murarka
Theory and Practice of Coarse-Grained Molecular Dynamics of Biologically Important Systems. Biomolecules 11 (9) (2021)
Mateusz Kogut, Zhou Gong, Chun Tang, Jozef Adam Liwo
Pseudopotentials for coarse-grained cross-link-assisted modeling of protein structures. Journal of computational chemistry 42 (29) (2021)
G J Agur Sevink, Jozef Adam Liwo, Pietro Asinari, Donal MacKernan, Giuseppe Milano, Ignacio Pagonabarraga
Unfolding the prospects of computational (bio)materials modeling. The Journal of chemical physics 153 (10) (2020)
Agnieszka S Karczyńska, Karolina Ziȩba, Urszula Uciechowska, Magdalena A Mozolewska, Pawel Krupa, Emilia A Lubecka, Agnieszka G Lipska, Celina Sikorska, Sergey A Samsonov, Adam K Sieradzan, Artur Giełdoń, Jozef Adam Liwo, Rafał Ślusarz, Magdalena Ślusarz, Jooyoung Lee, Keehyoung Joo, Cezary Czaplewski
Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13. Journal of chemical information and modeling 60 (3) (2020)
Karolina Zieba, Cezary Czaplewski, Jozef Adam Liwo, Giuseppe Graziano
Hydrophobic hydration and pairwise hydrophobic interaction of Lennard-Jones and Mie particles in different water models. Physical chemistry chemical physics : PCCP 22 (8) (2020)
Jozef Adam Liwo, Cezary Czaplewski
Extension of the force-matching method to coarse-grained models with axially symmetric sites to produce transferable force fields: Application to the UNRES model of proteins. The Journal of chemical physics 152 (5) (2020)
Emilia A Lubecka, Jozef Adam Liwo
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. II. Backbone-local potentials of coarse-grained O1→4-bonded polyglucose chains. The Journal of chemical physics 147 (11) (2018)
Gergely Kohut, Jozef Adam Liwo, Szilvia Erika Bősze, Tamás Beke-Somfai, Sergey A Samsonov
Protein-Ligand Interaction Energy-Based Entropy Calculations: Fundamental Challenges For Flexible Systems. The journal of physical chemistry. B 122 (32) (2018)
Adam K Sieradzan, Artur Giełdoń, Yanping Yin, Yi He, Harold A Scheraga, Jozef Adam Liwo
A new protein nucleic-acid coarse-grained force field based on the UNRES and NARES-2P force fields. Journal of computational chemistry 39 (28) (2018)
Adam K Sieradzan, Mariusz Makowski, Antoni Augustynowicz, Jozef Adam Liwo
A general method for the derivation of the functional forms of the effective energy terms in coarse-grained energy functions of polymers. I. Backbone potentials of coarse-grained polypeptide chains. The Journal of chemical physics 146 (12) (2018)
Agnieszka S Karczyńska, Cezary Czaplewski, Paweł Krupa, Magdalena A Mozolewska, Keehyoung Joo, Jooyoung Lee, Jozef Adam Liwo
Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins. Journal of computational chemistry 38 (31) (2017)
Paweł Krupa, Adam K Sieradzan, Magdalena A Mozolewska, Huiyu Li, Jozef Adam Liwo, Harold A Scheraga
Dynamics of Disulfide-Bond Disruption and Formation in the Thermal Unfolding of Ribonuclease A. Journal of chemical theory and computation 13 (11) (2017)
Paweł Krupa, Anna Hałabis, Wioletta Żmudzińska, Stanisław Ołdziej, Harold A Scheraga, Jozef Adam Liwo
Correction to Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics. Journal of chemical information and modeling 58 (1) (2017)
Paweł Krupa, Anna Hałabis, Wioletta Żmudzińska, Stanisław Ołdziej, Harold A Scheraga, Jozef Adam Liwo
Maximum Likelihood Calibration of the UNRES Force Field for Simulation of Protein Structure and Dynamics. Journal of chemical information and modeling 57 (9) (2017)

Jozef Adam Liwo.css-eqlu8i{font-size:small;padding-left:4px;} (A Liwo, Adam Liwo)

Publication Activity (10 Years)

Top Topics

Top Venues

Jozef Adam Liwo (A Liwo, Adam Liwo)