Luís Borges-Araújo

Publication Activity (10 Years)

Years Active: 2021-2024
Publications (10 Years): 8

Top Topics

Molecular Dynamics

Single Molecule

Low Density Lipoprotein

Virtual Reality

Top Venues

Journal of chemical theory and computation

Nature communications

This page only lists publications with an associated author ORCID identifier.

Publications

Gilberto P Pereira, Riccardo Alessandri, Moisés Domínguez, Rocío Araya-Osorio, Linus Grünewald, Luís Borges-Araújo, Sangwook Wu, Siewert-Jan Marrink, Paulo Cesar Telles de Souza, Raul Mera-Adasme
Bartender: Martini 3 Bonded Terms via Quantum Mechanics-Based Molecular Dynamics. Journal of chemical theory and computation 20 (13) (2024)
Kasper B Pedersen, Luís Borges-Araújo, Amanda Dyrholm Stange, Paulo Cesar Telles de Souza, Siewert-Jan Marrink, Birgit Schiøtt
OLIVES: A Go̅-like Model for Stabilizing Protein Structure via Hydrogen Bonding Native Contacts in the Martini 3 Coarse-Grained Force Field. Journal of chemical theory and computation (2024)
Gilberto P Pereira, Riccardo Alessandri, Moisés Domínguez, Rocío Araya-Osorio, Linus Grünewald, Luís Borges-Araújo, Sangwook Wu, Siewert-Jan Marrink, Paulo Cesar Telles de Souza, Raul Mera-Adasme
Bartender: Martini 3 Bonded Terms via Quantum Mechanics-Based Molecular Dynamics. Journal of chemical theory and computation (2024)
Chancievan Thangaratnarajah, Mark Nijland, Luís Borges-Araújo, Aike Jeucken, Jan Rheinberger, Siewert-Jan Marrink, Paulo Cesar Telles de Souza, Cristina Paulino, Dirk Jan Slotboom
Expulsion mechanism of the substrate-translocating subunit in ECF transporters. Nature communications 14 (1) (2023)
Luís Borges-Araújo, Ilias Patmanidis, Akhil P Singh, Lucianna H S Santos, Adam K Sieradzan, Stefano Vanni, Cezary Czaplewski, Sergio Pantano, Wataru Shinoda, Luca Monticelli, Jozef Adam Liwo, Siewert-Jan Marrink, Paulo Cesar Telles de Souza
Pragmatic Coarse-Graining of Proteins: Models and Applications. Journal of chemical theory and computation (2023)
Luís Borges-Araújo, Ana C Borges-Araújo, Tugba Nur Ozturk, Daniel P Ramirez-Echemendia, Balázs Fábián, Timothy S Carpenter, Sebastian Thallmair, Jonathan Barnoud, Helgi I Ingólfsson, Gerhard Hummer, D Peter Tieleman, Siewert-Jan Marrink, Paulo Cesar Telles de Souza, Manuel N Melo
Martini 3 Coarse-Grained Force Field for Cholesterol. Journal of chemical theory and computation (2023)
Luís Borges-Araújo, Marina E Monteiro, Dalila Mil-Homens, Nuno Bernardes, Maria João Sarmento, Ana Coutinho, Manuel Prieto, Fábio Fernandes
Impact of Ca 2+ -Induced PI(4,5)P 2 Clusters on PH-YFP Organization and Protein-Protein Interactions. Biomolecules 12 (7) (2022)
Luís Borges-Araújo, Paulo Cesar Telles de Souza, Fábio Fernandes, Manuel N Melo
Improved Parameterization of Phosphatidylinositide Lipid Headgroups for the Martini 3 Coarse-Grain Force Field. Journal of chemical theory and computation 18 (1) (2021)