Sergio Pantano

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 26

Top Topics

Molecular Dynamics Simulations

Single Molecule

Top Venues

Journal of chemical theory and computation

Journal of chemical information and modeling

International journal of molecular sciences

Nature microbiology

This page only lists publications with an associated author ORCID identifier.

Publications

Pablo G Garay, Matías R Machado, Hugo Verli, Sergio Pantano
SIRAH Late Harvest: Coarse-Grained Models for Protein Glycosylation. Journal of chemical theory and computation 20 (2) (2024)
Pablo G Garay, Matías R Machado, Hugo Verli, Sergio Pantano
SIRAH Late Harvest: Coarse-Grained Models for Protein Glycosylation. Journal of chemical theory and computation 20 (2) (2024)
Pablo G Garay, Matías R Machado, Hugo Verli, Sergio Pantano
SIRAH Late Harvest: Coarse-Grained Models for Protein Glycosylation. Journal of chemical theory and computation (2024)
Ezequiel N Frigini, Rodolfo D Porasso, Tamás Beke-Somfai, José Javier López Cascales, Ricardo D Enriz, Sergio Pantano
The Mechanism of Antimicrobial Small-Cationic Peptides from Coarse-Grained Simulations. Journal of chemical information and modeling (2023)
Mónica L Acevedo, Aracelly Gaete-Argel, Luis Alonso-Palomares, Marco Montes de Oca, Andrés Bustamante, Aldo Gaggero, Fabio Paredes, Claudia P Cortes, Sergio Pantano, Constanza Martínez-Valdebenito, Jenniffer Angulo, Nicole Le Corre, Marcela Ferrés, Marcelo A Navarrete, Fernando Valiente-Echeverría, Ricardo Soto-Rifo
Author Correction: Differential neutralizing antibody responses elicited by CoronaVac and BNT162b2 against SARS-CoV-2 Lambda in Chile. Nature microbiology (2023)
David A Case, Hasan Metin Aktulga, Kellon Belfon, David S Cerutti, Gerardo Andrés Cisneros, Vinícius Wilian D Cruzeiro, Negin Forouzesh, Timothy J Giese, Andreas W Götz, Holger Gohlke, Saeed Izadi, Koushik Kasavajhala, Mehmet C Kaymak, Edward King, Tom Kurtzman, Tai-Sung Lee, Pengfei Li, Jian Liu, Tyler Luchko, Ray Luo, Madushanka Manathunga, Matías R Machado, Hai Minh Nguyen, Kurt A O'Hearn, Alexey V Onufriev, Feng Pan, Sergio Pantano, Ruxi Qi, Ali Rahnamoun, Ali Risheh, Stephan Schott-Verdugo, Akhil Shajan, Jason Swails, Junmei Wang, Haixin Wei, Xiongwu Wu, Yongxian Wu, Shi Zhang, Shiji Zhao, Qiang Zhu, Thomas E Cheatham, Daniel R Roe, Adrian E Roitberg, Carlos L Simmerling, Darrin M York, Maria C Nagan, Kenneth M Merz
AmberTools. Journal of chemical information and modeling (2023)
Mónica L Acevedo, Aracelly Gaete-Argel, Luis Alonso-Palomares, Marco Montes de Oca, Andrés Bustamante, Aldo Gaggero, Fabio Paredes, Claudia P Cortes, Sergio Pantano, Constanza Martínez-Valdebenito, Jenniffer Angulo, Nicole Le Corre, Marcela Ferrés, Marcelo A Navarrete, Fernando Valiente-Echeverría, Ricardo Soto-Rifo
Author Correction: Differential neutralizing antibody responses elicited by CoronaVac and BNT162b2 against SARS-CoV-2 Lambda in Chile. Nature microbiology (2023)
Luís Borges-Araújo, Ilias Patmanidis, Akhil P Singh, Lucianna H S Santos, Adam K Sieradzan, Stefano Vanni, Cezary Czaplewski, Sergio Pantano, Wataru Shinoda, Luca Monticelli, Jozef Adam Liwo, Siewert-Jan Marrink, Paulo Cesar Telles de Souza
Pragmatic Coarse-Graining of Proteins: Models and Applications. Journal of chemical theory and computation (2023)
Mónica L Acevedo, Aracelly Gaete-Argel, Luis Alonso-Palomares, Marco Montes de Oca, Andrés Bustamante, Aldo Gaggero, Fabio Paredes, Claudia P Cortes, Sergio Pantano, Constanza Martínez-Valdebenito, Jenniffer Angulo, Nicole Le Corre, Marcela Ferrés, Marcelo A Navarrete, Fernando Valiente-Echeverría, Ricardo Soto-Rifo
Differential neutralizing antibody responses elicited by CoronaVac and BNT162b2 against SARS-CoV-2 Lambda in Chile. Nature microbiology 7 (4) (2022)
Manuel Sanguinetti, Lucianna Helene Santos, Juliette Dourron, Catalina Alamón, Juan Idiarte, Sotiris Amillis, Sergio Pantano, Ana Ramón
Substrate Recognition Properties from an Intermediate Structural State of the UreA Transporter. International journal of molecular sciences 23 (24) (2022)
Manuel Sanguinetti, Lucianna Helene Santos, Juliette Dourron, Catalina Alamón, Juan Idiarte, Sotiris Amillis, Sergio Pantano, Ana Ramón
Substrate Recognition Properties from an Intermediate Structural State of the UreA Transporter. International journal of molecular sciences 23 (24) (2022)
Manuel Sanguinetti, Lucianna Helene Santos, Juliette Dourron, Catalina Alamón, Juan Idiarte, Sotiris Amillis, Sergio Pantano, Ana Ramón
Substrate Recognition Properties from an Intermediate Structural State of the UreA Transporter. International journal of molecular sciences 23 (24) (2022)
Manuel Sanguinetti, Lucianna Helene Santos, Juliette Dourron, Catalina Alamón, Juan Idiarte, Sotiris Amillis, Sergio Pantano, Ana Ramón
Substrate Recognition Properties from an Intermediate Structural State of the UreA Transporter. International journal of molecular sciences 23 (24) (2022)
Pedro Besada, María Gallardo-Gómez, Tania Pérez-Márquez, Lucía Patiño-Álvarez, Sergio Pantano, Carlos Silva López, Carmen Terán, Ana Arévalo-Gómez, Aurora Ruz-Zafra, Julián Fernández-Martín, Saida Ortolano
The New Pharmacological Chaperones PBXs Increase α-Galactosidase A Activity in Fabry Disease Cellular Models. Biomolecules 11 (12) (2021)
Andrea Medeiros, Diego Benítez, Ricarda S Korn, Vinicius C Ferreira, Exequiel E Barrera, Federico Carrión, Otto Pritsch, Sergio Pantano, Conrad Kunick, Camila I de Oliveira, Oliver C F Orban, Marcelo Alberto Comini
Mechanistic and biological characterisation of novel N5-substituted paullones targeting the biosynthesis of trypanothione in Leishmania. Journal of enzyme inhibition and medicinal chemistry 35 (1) (2021)
Jorge González-Puelma, Jacqueline Aldridge, Marco Montes de Oca, Mónica Pinto, Roberto Uribe-Paredes, José Fernández-Goycoolea, Diego Alvarez-Saravia, Hermy Álvarez, Gonzalo Encina, Thomas Weitzel, Rodrigo Muñoz, Alvaro Olivera-Nappa, Sergio Pantano, Marcelo A Navarrete
Mutation in a SARS-CoV-2 Haplotype from Sub-Antarctic Chile Reveals New Insights into the Spike's Dynamics. Viruses 13 (5) (2021)
Martín Soñora, Leandro Martínez, Sergio Pantano, Matías R Machado
Wrapping Up Viruses at Multiscale Resolution: Optimizing PACKMOL and SIRAH Execution for Simulating the Zika Virus. Journal of chemical information and modeling 61 (1) (2021)
Florencia Klein, Exequiel E Barrera, Sergio Pantano
Assessing SIRAH's Capability to Simulate Intrinsically Disordered Proteins and Peptides. Journal of chemical theory and computation 17 (2) (2021)
Florencia Klein, Daniela Cáceres, Mónica A Carrasco, Juan Carlos Tapia, Julio Caballero, Jans H Alzate-Morales, Sergio Pantano
Coarse-Grained Parameters for Divalent Cations within the SIRAH Force Field. Journal of chemical information and modeling 60 (8) (2020)
Matías R Machado, Sergio Pantano
Split the Charge Difference in Two! A Rule of Thumb for Adding Proper Amounts of Ions in MD Simulations. Journal of chemical theory and computation 16 (3) (2020)
Pablo G Garay, Exequiel E Barrera, Sergio Pantano
Post-Translational Modifications at the Coarse-Grained Level with the SIRAH Force Field. Journal of chemical information and modeling 60 (2) (2020)
Matías R Machado, Ari Zeida, Leonardo Darré, Sergio Pantano
From quantum to subcellular scales: multi-scale simulation approaches and the SIRAH force field. Interface focus 9 (3) (2019)
Enrico Riccardi, Sergio Pantano, Raffaello Potestio
Envisioning data sharing for the biocomputing community. Interface focus 9 (3) (2019)
Exequiel E Barrera, Matías R Machado, Sergio Pantano
Fat SIRAH: Coarse-Grained Phospholipids To Explore Membrane-Protein Dynamics. Journal of chemical theory and computation 15 (10) (2019)
Matías R Machado, Exequiel E Barrera, Florencia Klein, Martín Sóñora, Steffano Silva, Sergio Pantano
The SIRAH 2.0 Force Field: Altius, Fortius, Citius. Journal of chemical theory and computation 15 (4) (2019)
Matı As R Machado, Humberto C González, Sergio Pantano
MD Simulations of Viruslike Particles with Supra CG Solvation Affordable to Desktop Computers. Journal of chemical theory and computation 13 (10) (2017)