Alexander J Westermann

Publication Activity (10 Years)

Years Active: 2017-2024
Publications (10 Years): 36

Top Topics

Pulmonary Tuberculosis

Top Venues

Proceedings of the National Academy of Sciences of the United States of America

Nature microbiology

The Journal of experimental medicine

This page only lists publications with an associated author ORCID identifier.

Publications

Gianluca Prezza, Chunyu Liao, Sarah Reichardt, Chase L Beisel, Alexander J Westermann
CRISPR-based screening of small RNA modulators of bile susceptibility in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Gianluca Prezza, Chunyu Liao, Sarah Reichardt, Chase L Beisel, Alexander J Westermann
CRISPR-based screening of small RNA modulators of bile susceptibility in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Kaiyi Zhang, Urska Repnik, Nour Diab, Daniel Friske, Andreas Puetz, Alina Z Bachmann, Narasimha Murthy Keshava Prasad Gubbi, Michael Hensel, Konrad U Förstner, Alexander J Westermann, Aline Dupont, Mathias W Hornef
Non-professional efferocytosis of Salmonella-infected intestinal epithelial cells in the neonatal host. The Journal of experimental medicine 221 (3) (2024)
Fergal J Hamrock, Daniel Ryan, Ali Shaibah, Anna S Ershova, Aalap Mogre, Maha M Sulimani, Safa Ben Taarit, Sarah Reichardt, Karsten Hokamp, Alexander J Westermann, Carsten Kröger
Global analysis of the RNA-RNA interactome in Acinetobacter baumannii AB5075 uncovers a small regulatory RNA repressing the virulence-related outer membrane protein CarO. Nucleic acids research (2024)
Gianluca Prezza, Chunyu Liao, Sarah Reichardt, Chase L Beisel, Alexander J Westermann
CRISPR-based screening of small RNA modulators of bile susceptibility in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Kaiyi Zhang, Urska Repnik, Nour Diab, Daniel Friske, Andreas Puetz, Alina Z Bachmann, Narasimha Murthy Keshava Prasad Gubbi, Michael Hensel, Konrad U Förstner, Alexander J Westermann, Aline Dupont, Mathias W Hornef
Non-professional efferocytosis of Salmonella-infected intestinal epithelial cells in the neonatal host. The Journal of experimental medicine 221 (3) (2024)
Gianluca Prezza, Chunyu Liao, Sarah Reichardt, Chase L Beisel, Alexander J Westermann
CRISPR-based screening of small RNA modulators of bile susceptibility in Bacteroides thetaiotaomicron . Proceedings of the National Academy of Sciences of the United States of America 121 (6) (2024)
Kaiyi Zhang, Urska Repnik, Nour Diab, Daniel Friske, Andreas Puetz, Alina Z Bachmann, Narasimha Murthy Keshava Prasad Gubbi, Michael Hensel, Konrad U Förstner, Alexander J Westermann, Aline Dupont, Mathias W Hornef
Non-professional efferocytosis of Salmonella-infected intestinal epithelial cells in the neonatal host. The Journal of experimental medicine 221 (3) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan J Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An expanded transcriptome atlas for Bacteroides thetaiotaomicron reveals a small RNA that modulates tetracycline sensitivity. Nature microbiology 9 (4) (2024)
Chunlei Jiao, Claas Reckstadt, Fabian König, Christina Homberger, Jiaqi Yu, Jörg Vogel, Alexander J Westermann, Cynthia Mira Sharma, Chase L Beisel
RNA recording in single bacterial cells using reprogrammed tracrRNAs. Nature biotechnology (2023)
Chunlei Jiao, Claas Reckstadt, Fabian König, Christina Homberger, Jiaqi Yu, Jörg Vogel, Alexander J Westermann, Cynthia Mira Sharma, Chase L Beisel
RNA recording in single bacterial cells using reprogrammed tracrRNAs. Nature biotechnology (2023)
Daniel Ryan, Elise Bornet, Gianluca Prezza, Shuba Varshini Alampalli, Taís Franco de Carvalho, Hannah Felchle, Titus Ebbecke, Regan Hayward, Adam M Deutschbauer, Lars Barquist, Alexander J Westermann
An integrated transcriptomics-functional genomics approach reveals a small RNA that modulates Bacteroides thetaiotaomicron sensitivity to tetracyclines. bioRxiv : the preprint server for biology (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Ev-Marie Schuster, Maximilian W Epple, Katharina M Glaser, Michael Mihlan, Kerstin Lucht, Julia A Zimmermann, Anna Bremser, Aikaterini Polyzou, Nadine Obier, Nina Cabezas-Wallscheid, Eirini Trompouki, Andrea Balabio, Jörg Vogel, Joerg M Buescher, Alexander J Westermann, Angelika S Rambold
TFEB induces mitochondrial itaconate synthesis to suppress bacterial growth in macrophages. Nature metabolism 4 (7) (2022)
Marcus Fulde, Kira van Vorst, Kaiyi Zhang, Alexander J Westermann, Tobias Busche, Yong Chiun Huei, Katharina Welitschanski, Isabell Froh, Dennis Pägelow, Johanna Plendl, Christiane Pfarrer, Jörn Kalinowski, Jörg Vogel, Peter Valentin-Weigand, Michael Hensel, Karsten Tedin, Urska Repnik, Mathias W Hornef
SPI2 T3SS effectors facilitate enterocyte apical to basolateral transmigration of Salmonella -containing vacuoles in vivo . Gut microbes 13 (1) (2022)
Alexander J Westermann, Jörg Vogel
Cross-species RNA-seq for deciphering host-microbe interactions. Nature reviews. Genetics 22 (6) (2021)
Gianluca Prezza, Daniel Ryan, Gohar Mädler, Sarah Reichardt, Lars Barquist, Alexander J Westermann
Comparative genomics provides structural and functional insights into Bacteroides RNA biology. Molecular microbiology (2021)
Fabienne Hennessen, Marcus Miethke, Nestor Zaburannyi, Maria Loose, Tadeja Lukežič, Steffen Bernecker, Stephan Hüttel, Rolf Jansen, Judith Schmiedel, Moritz Fritzenwanker, Can Imirzalioglu, Jörg Vogel, Alexander J Westermann, Thomas Hesterkamp, Marc Stadler, Florian Wagenlehner, Hrvoje Petković, Jennifer Herrmann, Daniel Krug
Amidochelocardin Overcomes Resistance Mechanisms Exerted on Tetracyclines and Natural Chelocardin. Antibiotics (Basel, Switzerland) 9 (9) (2020)
Daniel Ryan, Gianluca Prezza, Alexander J Westermann
An RNA-centric view on gut Bacteroidetes. Biological chemistry 402 (1) (2020)
Daniel Ryan, Laura Jenniches, Sarah Reichardt, Lars Barquist, Alexander J Westermann
A high-resolution transcriptome map identifies small RNA regulation of metabolism in the gut microbe Bacteroides thetaiotaomicron. Nature communications 11 (1) (2020)
Daniel Ryan, Gianluca Prezza, Alexander J Westermann
An RNA-centric view on gut Bacteroidetes. Biological chemistry (2020)
Elisa Venturini, Sarah L Svensson, Sandra Maaß, Rick Gelhausen, Florian Eggenhofer, Lei Li, Amy K Cain, Julian Parkhill, Dörte Becher, Rolf Backofen, Lars Barquist, Cynthia Mira Sharma, Alexander J Westermann, Jörg Vogel
A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence. microLife 1 (1) (2020)
Daphne A C Stapels, Peter W S Hill, Alexander J Westermann, Robert A Fisher, Teresa L M Thurston, Antoine-Emmanuel Saliba, Isabelle Blommestein, Jörg Vogel, Sophie Helaine
Salmonella persisters undermine host immune defenses during antibiotic treatment. Science (New York, N.Y.) 362 (6419) (2019)
Lars Barquist, Alexander J Westermann, Jörg Vogel
Molecular phenotyping of infection-associated small non-coding RNAs. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 371 (1707) (2017)