Jörg Vogel

Publication Activity (10 Years)

Years Active: 2016-2024
Publications (10 Years): 75

Top Topics

Escherichia Coli

Binding Protein

Top Venues

Nucleic acids research

Nature microbiology

Proceedings of the National Academy of Sciences of the United States of America

This page only lists publications with an associated author ORCID identifier.

Publications

Katarzyna J Bandyra, Kathrin Sophie Fröhlich, Jörg Vogel, Marina Rodnina, Akanksha Goyal, Ben F Luisi
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance. Nucleic acids research 52 (15) (2024)
Falk Ponath, Yan Zhu, Jörg Vogel
Transcriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σ E -dependent small RNA with unusual mRNA activation activity. mBio 15 (4) (2024)
Falk Ponath, Yan Zhu, Jörg Vogel
Transcriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σ E -dependent small RNA with unusual mRNA activation activity. mBio 15 (4) (2024)
Josh McQuail, Gianluca Matera, Tom Gräfenhan, Thorsten Bischler, Per Haberkant, Frank Stein, Jörg Vogel, Sivaramesh Wigneshweraraj
Global Hfq-mediated RNA interactome of nitrogen starved Escherichia coli uncovers a conserved post-transcriptional regulatory axis required for optimal growth recovery. Nucleic acids research 52 (5) (2024)
Milan Gerovac, Kotaro Chihara, Laura Wicke, Bettina Boettcher, Rob Lavigne, Jörg Vogel
Phage proteins target and co-opt host ribosomes immediately upon infection. Nature microbiology 9 (3) (2024)
Katarzyna J Bandyra, Kathrin Sophie Fröhlich, Jörg Vogel, Marina Rodnina, Akanksha Goyal, Ben F Luisi
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance. Nucleic acids research 52 (15) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Yan Zhu, Falk Ponath, Valentina Cosi, Jörg Vogel
A global survey of small RNA interactors identifies KhpA and KhpB as major RNA-binding proteins in Fusobacterium nucleatum. Nucleic acids research 52 (7) (2024)
Milan Gerovac, Kotaro Chihara, Laura Wicke, Bettina Boettcher, Rob Lavigne, Jörg Vogel
Phage proteins target and co-opt host ribosomes immediately upon infection. Nature microbiology 9 (3) (2024)
Falk Ponath, Yan Zhu, Jörg Vogel
Transcriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σ E -dependent small RNA with unusual mRNA activation activity. mBio 15 (4) (2024)
Leena Putzeys, Laura Wicke, Maarten Boon, Marília Cristina Santos de Medeiros, Jörg Vogel, Rob Lavigne
Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa . microLife 5 (2024)
Yan Zhu, Falk Ponath, Valentina Cosi, Jörg Vogel
A global survey of small RNA interactors identifies KhpA and KhpB as major RNA-binding proteins in Fusobacterium nucleatum. Nucleic acids research 52 (7) (2024)
Milan Gerovac, Kotaro Chihara, Laura Wicke, Bettina Boettcher, Rob Lavigne, Jörg Vogel
Phage proteins target and co-opt host ribosomes immediately upon infection. Nature microbiology 9 (3) (2024)
Milan Gerovac, Kotaro Chihara, Laura Wicke, Bettina Boettcher, Rob Lavigne, Jörg Vogel
Phage proteins target and co-opt host ribosomes immediately upon infection. Nature microbiology 9 (3) (2024)
Falk Ponath, Yan Zhu, Jörg Vogel
Transcriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σ E -dependent small RNA with unusual mRNA activation activity. mBio 15 (4) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Josh McQuail, Gianluca Matera, Tom Gräfenhan, Thorsten Bischler, Per Haberkant, Frank Stein, Jörg Vogel, Sivaramesh Wigneshweraraj
Global Hfq-mediated RNA interactome of nitrogen starved Escherichia coli uncovers a conserved post-transcriptional regulatory axis required for optimal growth recovery. Nucleic acids research 52 (5) (2024)
Katarzyna J Bandyra, Kathrin Sophie Fröhlich, Jörg Vogel, Marina Rodnina, Akanksha Goyal, Ben F Luisi
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance. Nucleic acids research 52 (15) (2024)
Falk Ponath, Yan Zhu, Jörg Vogel
Transcriptome fine-mapping in Fusobacterium nucleatum reveals FoxJ, a new σ E -dependent small RNA with unusual mRNA activation activity. mBio (2024)
Yan Zhu, Falk Ponath, Valentina Cosi, Jörg Vogel
A global survey of small RNA interactors identifies KhpA and KhpB as major RNA-binding proteins in Fusobacterium nucleatum. Nucleic acids research (2024)
Pascale Cossart, Jörg Hacker, David H Holden, Staffan Normark, Jörg Vogel
Meeting report 'Microbiology 2023: from single cell to microbiome and host', an international interacademy conference in Würzburg. microLife 5 (2024)
Pascale Cossart, Jörg Hacker, David H Holden, Staffan Normark, Jörg Vogel
Meeting report 'Microbiology 2023: from single cell to microbiome and host', an international interacademy conference in Würzburg. microLife 5 (2024)
Katarzyna J Bandyra, Kathrin Sophie Fröhlich, Jörg Vogel, Marina Rodnina, Akanksha Goyal, Ben F Luisi
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance. Nucleic acids research (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Laura Jenniches, Charlotte Michaux, Linda Popella, Sarah Reichardt, Jörg Vogel, Alexander J Westermann, Lars Barquist
Improved RNA stability estimation through Bayesian modeling reveals most Salmonella transcripts have subminute half-lives. Proceedings of the National Academy of Sciences of the United States of America 121 (14) (2024)
Katarzyna J Bandyra, Kathrin Sophie Fröhlich, Jörg Vogel, Marina Rodnina, Akanksha Goyal, Ben F Luisi
Cooperation of regulatory RNA and the RNA degradosome in transcript surveillance. Nucleic acids research 52 (15) (2024)
Josh McQuail, Gianluca Matera, Tom Gräfenhan, Thorsten Bischler, Per Haberkant, Frank Stein, Jörg Vogel, Sivaramesh Wigneshweraraj
Global Hfq-mediated RNA interactome of nitrogen starved Escherichia coli uncovers a conserved post-transcriptional regulatory axis required for optimal growth recovery. Nucleic acids research 52 (5) (2024)
Leena Putzeys, Laura Wicke, Maarten Boon, Marília Cristina Santos de Medeiros, Jörg Vogel, Rob Lavigne
Refining the transcriptional landscapes for distinct clades of virulent phages infecting Pseudomonas aeruginosa . microLife 5 (2024)
Rhonda L McFleder, Anastasiia Makhotkina, Janos Groh, Ursula Keber, Fabian Imdahl, Josefina Peña Mosca, Alina Peteranderl, Jingjing Wu, Sawako Tabuchi, Jan Hoffmann, Ann-Kathrin Karl, Axel Pagenstecher, Jörg Vogel, Andreas Beilhack, James B Koprich, Jonathan M Brotchie, Antoine-Emmanuel Saliba, Jens Volkmann, Chi Wang Ip
Brain-to-gut trafficking of alpha-synuclein by CD11c + cells in a mouse model of Parkinson's disease. Nature communications 14 (1) (2023)
Chunlei Jiao, Claas Reckstadt, Fabian König, Christina Homberger, Jiaqi Yu, Jörg Vogel, Alexander J Westermann, Cynthia Mira Sharma, Chase L Beisel
RNA recording in single bacterial cells using reprogrammed tracrRNAs. Nature biotechnology (2023)
Jörg Vogel, Victor de Lorenzo
EAM highlights in FEMS 2023: from the Petri dish to planet Earth. microLife 4 (2023)
Chunlei Jiao, Claas Reckstadt, Fabian König, Christina Homberger, Jiaqi Yu, Jörg Vogel, Alexander J Westermann, Cynthia Mira Sharma, Chase L Beisel
RNA recording in single bacterial cells using reprogrammed tracrRNAs. Nature biotechnology (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Anke Sparmann, Jörg Vogel
RNA-based medicine: from molecular mechanisms to therapy. The EMBO journal (2023)
Josh McQuail, Gianluca Matera, Tom Gräfenhan, Thorsten Bischler, Per Haberkant, Frank Stein, Jörg Vogel, Sivaramesh Wigneshweraraj
Global Hfq-mediated RNA interactome of nitrogen starved Escherichia coli uncovers a conserved post-transcriptional regulatory axis required for optimal growth recovery. Nucleic acids research (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Jörg Vogel, Victor de Lorenzo
EAM highlights in FEMS 2023: from the Petri dish to planet Earth. microLife 4 (2023)
Thomas Däullary, Fabian Imdahl, Oliver Dietrich, Laura Hepp, Tobias Krammer, Christina Fey, Winfried Neuhaus, Marco Metzger, Jörg Vogel, Alexander J Westermann, Antoine-Emmanuel Saliba, Daniela Zdzieblo
A primary cell-based in vitro model of the human small intestine reveals host olfactomedin 4 induction in response to Salmonella Typhimurium infection. Gut microbes 15 (1) (2023)
Charlotte Michaux, Milan Gerovac, Elisabeth E Hansen, Lars Barquist, Jörg Vogel
Grad-seq analysis of Enterococcus faecalis and Enterococcus faecium provides a global view of RNA and protein complexes in these two opportunistic pathogens. microLife 4 (2022)
Christina Homberger, Lars Barquist, Jörg Vogel
Ushering in a new era of single-cell transcriptomics in bacteria. microLife 3 (2022)
Jens Hör, Jakob Jung, Svetlana Ðurica-Mitić, Lars Barquist, Jörg Vogel
INRI-seq enables global cell-free analysis of translation initiation and off-target effects of antisense inhibitors. Nucleic acids research (2022)
Falk Ponath, Yan Zhu, Valentina Cosi, Jörg Vogel
Expanding the genetic toolkit helps dissect a global stress response in the early-branching species Fusobacterium nucleatum . Proceedings of the National Academy of Sciences of the United States of America 119 (40) (2022)
Marcus Fulde, Kira van Vorst, Kaiyi Zhang, Alexander J Westermann, Tobias Busche, Yong Chiun Huei, Katharina Welitschanski, Isabell Froh, Dennis Pägelow, Johanna Plendl, Christiane Pfarrer, Jörn Kalinowski, Jörg Vogel, Peter Valentin-Weigand, Michael Hensel, Karsten Tedin, Urska Repnik, Mathias W Hornef
SPI2 T3SS effectors facilitate enterocyte apical to basolateral transmigration of Salmonella -containing vacuoles in vivo . Gut microbes 13 (1) (2022)
Linda Popella, Jakob Jung, Phuong Thao Do, Regan J Hayward, Lars Barquist, Jörg Vogel
Comprehensive analysis of PNA-based antisense antibiotics targeting various essential genes in uropathogenic Escherichia coli. Nucleic acids research 50 (11) (2022)
Yael Yair, Charlotte Michaux, Dvora Biran, Jörg Bernhard, Jörg Vogel, Lars Barquist, Eliora Z Ron
Cellular RNA Targets of Cold Shock Proteins CspC and CspE and Their Importance for Serum Resistance in Septicemic Escherichia coli. mSystems 7 (4) (2022)
Miguel V Gomez-Raya-Vilanova, Katarzyna Leskinen, Arnab Bhattacharjee, Pasi Virta, Petja Rosenqvist, Jake L R Smith, Oliver W Bayfield, Christina Homberger, Tobias Kerrinnes, Jörg Vogel, Maria I Pajunen, Mikael Skurnik
The DNA polymerase of bacteriophage YerA41 replicates its T-modified DNA in a primer-independent manner. Nucleic acids research 50 (7) (2022)
Youssef El Mouali, Milan Gerovac, Raminta Mineikaitė, Jörg Vogel
In vivo targets of Salmonella FinO include a FinP-like small RNA controlling copy number of a cohabitating plasmid. Nucleic acids research 49 (9) (2021)
Alexander J Westermann, Jörg Vogel
Cross-species RNA-seq for deciphering host-microbe interactions. Nature reviews. Genetics 22 (6) (2021)
François Halloy, Annabelle Biscans, Katherine E Bujold, Alexandre Debacker, Alyssa C Hill, Aurélie Lacroix, Olivia Luige, Roger Strömberg, Linda Sundstrom, Jörg Vogel, Alice Ghidini
Innovative developments and emerging technologies in RNA therapeutics. RNA biology 19 (1) (2021)
Cindrilla Chumduri, Rajendra Kumar Gurumurthy, Hilmar Berger, Oliver Dietrich, Naveen Kumar, Stefanie Koster, Volker Brinkmann, Kirstin Hoffmann, Marina Drabkina, Panagiota Arampatzi, Dajung Son, Uwe Klemm, Hans-Joachim Mollenkopf, Hermann Herbst, Mandy Mangler, Jörg Vogel, Antoine-Emmanuel Saliba, Thomas F Meyer
Opposing Wnt signals regulate cervical squamocolumnar homeostasis and emergence of metaplasia. Nature cell biology 23 (2) (2021)
Milan Gerovac, Laura Wicke, Kotaro Chihara, Cornelius Schneider, Rob Lavigne, Jörg Vogel
A Grad-seq View of RNA and Protein Complexes in Pseudomonas aeruginosa under Standard and Bacteriophage Predation Conditions. mBio 12 (1) (2021)
Vanessa Lamm-Schmidt, Manuela Fuchs, Johannes Sulzer, Milan Gerovac, Jens Hör, Petra Dersch, Jörg Vogel, Franziska Faber
Grad-seq identifies KhpB as a global RNA-binding protein in Clostridioides difficile that regulates toxin production. microLife 2 (2021)
Linda Popella, Jakob Jung, Kristina Popova, Svetlana Ðurica-Mitić, Lars Barquist, Jörg Vogel
Global RNA profiles show target selectivity and physiological effects of peptide-delivered antisense antibiotics. Nucleic acids research 49 (8) (2021)
Falk Ponath, Caroline Tawk, Yan Zhu, Lars Barquist, Franziska Faber, Jörg Vogel
RNA landscape of the emerging cancer-associated microbe Fusobacterium nucleatum. Nature microbiology 6 (8) (2021)
Jörg Vogel
An RNA biology perspective on species-specific programmable RNA antibiotics. Molecular microbiology 113 (3) (2020)
Bozena Mika-Gospodorz, Suparat Giengkam, Alexander J Westermann, Jantana Wongsantichon, Willow Kion-Crosby, Suthida Chuenklin, Loo Chien Wang, Piyanate Sunyakumthorn, Radoslaw Mikolaj Sobota, Selvakumar Subbian, Jörg Vogel, Lars Barquist, Jeanne Salje
Dual RNA-seq of Orientia tsutsugamushi informs on host-pathogen interactions for this neglected intracellular human pathogen. Nature communications 11 (1) (2020)
Nora Schmidt, Caleb A Lareau, Hasmik Keshishian, Sabina Ganskih, Cornelius Schneider, Thomas Hennig, Randy Melanson, Simone Werner, Yuanjie Wei, Matthias Zimmer, Jens Ade, Luisa Kirschner, Sebastian Zielinski, Lars Dölken, Eric S Lander, Neva Caliskan, Utz Fischer, Jörg Vogel, Steven A Carr, Jochen Bodem, Mathias Munschauer
The SARS-CoV-2 RNA-protein interactome in infected human cells. Nature microbiology 6 (3) (2020)
Laura Wicke, Falk Ponath, Lucas Coppens, Milan Gerovac, Rob Lavigne, Jörg Vogel
Introducing differential RNA-seq mapping to track the early infection phase for Pseudomonas phage ɸKZ. RNA biology 18 (8) (2020)
Lishay Parhi, Tamar Alon-Maimon, Asaf Sol, Deborah Nejman, Amjad Shhadeh, Tanya Fainsod-Levi, Olga Yajuk, Batya Isaacson, Jawad Abed, Naseem Maalouf, Aviram Nissan, Judith Sandbank, Einav Yehuda-Shnaidman, Falk Ponath, Jörg Vogel, Ofer Mandelboim, Zvi Granot, Ravid Straussman, Gilad Bachrach
Breast cancer colonization by Fusobacterium nucleatum accelerates tumor growth and metastatic progression. Nature communications 11 (1) (2020)
Elisa Venturini, Sarah L Svensson, Sandra Maaß, Rick Gelhausen, Florian Eggenhofer, Lei Li, Amy K Cain, Julian Parkhill, Dörte Becher, Rolf Backofen, Lars Barquist, Cynthia Mira Sharma, Alexander J Westermann, Jörg Vogel
A global data-driven census of Salmonella small proteins and their potential functions in bacterial virulence. microLife 1 (1) (2020)
Saskia Bauriedl, Milan Gerovac, Nadja Heidrich, Thorsten Bischler, Lars Barquist, Jörg Vogel, Christoph Schoen
The minimal meningococcal ProQ protein has an intrinsic capacity for structure-based global RNA recognition. Nature communications 11 (1) (2020)
Fabian Imdahl, Ehsan Vafadarnejad, Christina Homberger, Antoine-Emmanuel Saliba, Jörg Vogel
Single-cell RNA-sequencing reports growth-condition-specific global transcriptomes of individual bacteria. Nature microbiology 5 (10) (2020)
Jens Hör, Geneviève Garriss, Silvia Di Giorgio, Lisa-Marie Hack, Jens T Vanselow, Konrad U Förstner, Andreas Schlosser, Birgitta Henriques-Normark, Jörg Vogel
Grad-seq in a Gram-positive bacterium reveals exonucleolytic sRNA activation in competence control. The EMBO journal 39 (9) (2020)
Daphne A C Stapels, Peter W S Hill, Alexander J Westermann, Robert A Fisher, Teresa L M Thurston, Antoine-Emmanuel Saliba, Isabelle Blommestein, Jörg Vogel, Sophie Helaine
Salmonella persisters undermine host immune defenses during antibiotic treatment. Science (New York, N.Y.) 362 (6419) (2019)
Erik Holmqvist, Jörg Vogel
RNA-binding proteins in bacteria. Nature reviews. Microbiology 16 (10) (2019)
Caroline Tawk, Giulia Nigro, Ines Rodrigues Lopes, Carmen Aguilar, Clivia Lisowski, Miguel Mano, Philippe J Sansonetti, Jörg Vogel, Ana Eulalio
Stress-induced host membrane remodeling protects from infection by non-motile bacterial pathogens. The EMBO journal 37 (23) (2018)
Mathias Munschauer, Jörg Vogel
Nuclear lncRNA stabilization in the host response to bacterial infection. The EMBO journal 37 (13) (2018)
Alexander J Westermann, Lars Barquist, Jörg Vogel
Resolving host-pathogen interactions by dual RNA-seq. PLoS pathogens 13 (2) (2017)
Alexandre Smirnov, Chuan Wang, Lisa L Drewry, Jörg Vogel
Molecular mechanism of mRNA repression in trans by a ProQ-dependent small RNA. The EMBO journal 36 (8) (2017)
Caroline Tawk, Malvika Sharan, Ana Eulalio, Jörg Vogel
A systematic analysis of the RNA-targeting potential of secreted bacterial effector proteins. Scientific reports 7 (1) (2017)
Charlotte Michaux, Erik Holmqvist, Erin Vasicek, Malvika Sharan, Lars Barquist, Alexander J Westermann, John S Gunn, Jörg Vogel
RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE. Proceedings of the National Academy of Sciences of the United States of America 114 (26) (2017)
Lars Barquist, Alexander J Westermann, Jörg Vogel
Molecular phenotyping of infection-associated small non-coding RNAs. Philosophical transactions of the Royal Society of London. Series B, Biological sciences 371 (1707) (2017)
Alexandre Smirnov, Konrad U Förstner, Erik Holmqvist, Andreas Otto, Regina Günster, Dörte Becher, Richard Reinhardt, Jörg Vogel
Grad-seq guides the discovery of ProQ as a major small RNA-binding protein. Proceedings of the National Academy of Sciences of the United States of America 113 (41) (2016)
Antoine-Emmanuel Saliba, Lei Li, Alexander J Westermann, Silke Appenzeller, Daphne A C Stapels, Leon N Schulte, Sophie Helaine, Jörg Vogel
Single-cell RNA-seq ties macrophage polarization to growth rate of intracellular Salmonella. Nature microbiology 2 (2016)
Erik Holmqvist, Patrick R Wright, Lei Li, Thorsten Bischler, Lars Barquist, Richard Reinhardt, Rolf Backofen, Jörg Vogel
Global RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivo. The EMBO journal 35 (9) (2016)